Stage 4: TOML integrations — gemini and tabnine migrated to plugin architecture (#2050)

Add TomlIntegration base class in base.py that mirrors MarkdownIntegration:
- Overrides command_filename() for .toml extension
- Extracts description from YAML frontmatter for top-level TOML key
- Renders prompt body in TOML multiline basic strings with escaped backslashes
- Keeps full processed template (including frontmatter) as prompt body
- Byte-for-byte parity with v0.4.4 release ZIP output

Create integrations/gemini/ and integrations/tabnine/ subpackages:
- Config-only __init__.py subclassing TomlIntegration
- Integration-specific update-context scripts (sh + ps1)

Add TomlIntegrationTests mixin with TOML-specific validations:
- Valid TOML parsing, description/prompt keys, {{args}} placeholder
- Setup/teardown, manifest tracking, install/uninstall round-trips
- CLI auto-promote (--ai) and --integration flag tests
- Complete file inventory tests (sh + ps)

Register both in INTEGRATION_REGISTRY; --ai auto-promote works automatically.

src/specify_cli/integrations/__init__.py

@@ -53,6 +53,7 @@ def _register_builtins() -> None:
     from .codebuddy import CodebuddyIntegration
     from .copilot import CopilotIntegration
     from .cursor_agent import CursorAgentIntegration
+    from .gemini import GeminiIntegration
     from .iflow import IflowIntegration
     from .junie import JunieIntegration
     from .kilocode import KilocodeIntegration
@@ -63,6 +64,7 @@ def _register_builtins() -> None:
     from .qwen import QwenIntegration
     from .roo import RooIntegration
     from .shai import ShaiIntegration
+    from .tabnine import TabnineIntegration
     from .trae import TraeIntegration
     from .vibe import VibeIntegration
     from .windsurf import WindsurfIntegration
@@ -75,6 +77,7 @@ def _register_builtins() -> None:
     _register(CodebuddyIntegration())
     _register(CopilotIntegration())
     _register(CursorAgentIntegration())
+    _register(GeminiIntegration())
     _register(IflowIntegration())
     _register(JunieIntegration())
     _register(KilocodeIntegration())
@@ -85,6 +88,7 @@ def _register_builtins() -> None:
     _register(QwenIntegration())
     _register(RooIntegration())
     _register(ShaiIntegration())
+    _register(TabnineIntegration())
     _register(TraeIntegration())
     _register(VibeIntegration())
     _register(WindsurfIntegration())

src/specify_cli/integrations/base.py

@@ -5,6 +5,8 @@ Provides:
 - ``IntegrationBase`` — abstract base every integration must implement.
 - ``MarkdownIntegration`` — concrete base for standard Markdown-format
   integrations (the common case — subclass, set three class attrs, done).
+- ``TomlIntegration`` — concrete base for TOML-format integrations
+  (Gemini, Tabnine — subclass, set three class attrs, done).
 """
 
 from __future__ import annotations
@@ -498,3 +500,136 @@ class MarkdownIntegration(IntegrationBase):
 
         created.extend(self.install_scripts(project_root, manifest))
         return created
+
+
+# ---------------------------------------------------------------------------
+# TomlIntegration — TOML-format agents (Gemini, Tabnine)
+# ---------------------------------------------------------------------------
+
+class TomlIntegration(IntegrationBase):
+    """Concrete base for integrations that use TOML command format.
+
+    Mirrors ``MarkdownIntegration`` closely: subclasses only need to set
+    ``key``, ``config``, ``registrar_config`` (and optionally
+    ``context_file``).  Everything else is inherited.
+
+    ``setup()`` processes command templates through the same placeholder
+    pipeline as ``MarkdownIntegration``, then converts the result to
+    TOML format (``description`` key + ``prompt`` multiline string).
+    """
+
+    def command_filename(self, template_name: str) -> str:
+        """TOML commands use ``.toml`` extension."""
+        return f"speckit.{template_name}.toml"
+
+    @staticmethod
+    def _extract_description(content: str) -> str:
+        """Extract the ``description`` value from YAML frontmatter.
+
+        Scans lines between the first pair of ``---`` delimiters for a
+        top-level ``description:`` key.  Returns the value (with
+        surrounding quotes stripped) or an empty string if not found.
+        """
+        in_frontmatter = False
+        for line in content.splitlines():
+            stripped = line.rstrip("\n\r")
+            if stripped == "---":
+                if not in_frontmatter:
+                    in_frontmatter = True
+                    continue
+                break  # second ---
+            if in_frontmatter and stripped.startswith("description:"):
+                _, _, value = stripped.partition(":")
+                return value.strip().strip('"').strip("'")
+        return ""
+
+    @staticmethod
+    def _render_toml(description: str, body: str) -> str:
+        """Render a TOML command file from description and body.
+
+        Uses multiline basic strings (``\"\"\"``) with backslashes
+        escaped, matching the output of the release script.  Falls back
+        to multiline literal strings (``'''``) if the body contains
+        ``\"\"\"``, then to an escaped basic string as a last resort.
+
+        The body is rstrip'd so the closing delimiter appears on the line
+        immediately after the last content line — matching the release
+        script's ``echo "$body"; echo '\"\"\"'`` pattern.
+        """
+        toml_lines: list[str] = []
+
+        if description:
+            desc = description.replace('"', '\\"')
+            toml_lines.append(f'description = "{desc}"')
+            toml_lines.append("")
+
+        body = body.rstrip("\n")
+
+        # Escape backslashes for basic multiline strings.
+        escaped = body.replace("\\", "\\\\")
+
+        if '"""' not in escaped:
+            toml_lines.append('prompt = """')
+            toml_lines.append(escaped)
+            toml_lines.append('"""')
+        elif "'''" not in body:
+            toml_lines.append("prompt = '''")
+            toml_lines.append(body)
+            toml_lines.append("'''")
+        else:
+            escaped_body = (
+                body.replace("\\", "\\\\")
+                .replace('"', '\\"')
+                .replace("\n", "\\n")
+                .replace("\r", "\\r")
+                .replace("\t", "\\t")
+            )
+            toml_lines.append(f'prompt = "{escaped_body}"')
+
+        return "\n".join(toml_lines) + "\n"
+
+    def setup(
+        self,
+        project_root: Path,
+        manifest: IntegrationManifest,
+        parsed_options: dict[str, Any] | None = None,
+        **opts: Any,
+    ) -> list[Path]:
+        templates = self.list_command_templates()
+        if not templates:
+            return []
+
+        project_root_resolved = project_root.resolve()
+        if manifest.project_root != project_root_resolved:
+            raise ValueError(
+                f"manifest.project_root ({manifest.project_root}) does not match "
+                f"project_root ({project_root_resolved})"
+            )
+
+        dest = self.commands_dest(project_root).resolve()
+        try:
+            dest.relative_to(project_root_resolved)
+        except ValueError as exc:
+            raise ValueError(
+                f"Integration destination {dest} escapes "
+                f"project root {project_root_resolved}"
+            ) from exc
+        dest.mkdir(parents=True, exist_ok=True)
+
+        script_type = opts.get("script_type", "sh")
+        arg_placeholder = self.registrar_config.get("args", "{{args}}") if self.registrar_config else "{{args}}"
+        created: list[Path] = []
+
+        for src_file in templates:
+            raw = src_file.read_text(encoding="utf-8")
+            description = self._extract_description(raw)
+            processed = self.process_template(raw, self.key, script_type, arg_placeholder)
+            toml_content = self._render_toml(description, processed)
+            dst_name = self.command_filename(src_file.stem)
+            dst_file = self.write_file_and_record(
+                toml_content, dest / dst_name, project_root, manifest
+            )
+            created.append(dst_file)
+
+        created.extend(self.install_scripts(project_root, manifest))
+        return created

src/specify_cli/integrations/gemini/__init__.py

@@ -0,0 +1,21 @@
+"""Gemini CLI integration."""
+
+from ..base import TomlIntegration
+
+
+class GeminiIntegration(TomlIntegration):
+    key = "gemini"
+    config = {
+        "name": "Gemini CLI",
+        "folder": ".gemini/",
+        "commands_subdir": "commands",
+        "install_url": "https://github.com/google-gemini/gemini-cli",
+        "requires_cli": True,
+    }
+    registrar_config = {
+        "dir": ".gemini/commands",
+        "format": "toml",
+        "args": "{{args}}",
+        "extension": ".toml",
+    }
+    context_file = "GEMINI.md"

src/specify_cli/integrations/gemini/scripts/update-context.ps1

@@ -0,0 +1,23 @@
+# update-context.ps1 — Gemini CLI integration: create/update GEMINI.md
+#
+# Thin wrapper that delegates to the shared update-agent-context script.
+# Activated in Stage 7 when the shared script uses integration.json dispatch.
+#
+# Until then, this delegates to the shared script as a subprocess.
+
+$ErrorActionPreference = 'Stop'
+
+# Derive repo root from script location (walks up to find .specify/)
+$scriptDir = Split-Path -Parent $MyInvocation.MyCommand.Definition
+$repoRoot = try { git rev-parse --show-toplevel 2>$null } catch { $null }
+# If git did not return a repo root, or the git root does not contain .specify,
+# fall back to walking up from the script directory to find the initialized project root.
+if (-not $repoRoot -or -not (Test-Path (Join-Path $repoRoot '.specify'))) {
+    $repoRoot = $scriptDir
+    $fsRoot = [System.IO.Path]::GetPathRoot($repoRoot)
+    while ($repoRoot -and $repoRoot -ne $fsRoot -and -not (Test-Path (Join-Path $repoRoot '.specify'))) {
+        $repoRoot = Split-Path -Parent $repoRoot
+    }
+}
+
+& "$repoRoot/.specify/scripts/powershell/update-agent-context.ps1" -AgentType gemini

src/specify_cli/integrations/gemini/scripts/update-context.sh

@@ -0,0 +1,28 @@
+#!/usr/bin/env bash
+# update-context.sh — Gemini CLI integration: create/update GEMINI.md
+#
+# Thin wrapper that delegates to the shared update-agent-context script.
+# Activated in Stage 7 when the shared script uses integration.json dispatch.
+#
+# Until then, this delegates to the shared script as a subprocess.
+
+set -euo pipefail
+
+# Derive repo root from script location (walks up to find .specify/)
+_script_dir="$(cd "$(dirname "$0")" && pwd)"
+_root="$_script_dir"
+while [ "$_root" != "/" ] && [ ! -d "$_root/.specify" ]; do _root="$(dirname "$_root")"; done
+if [ -z "${REPO_ROOT:-}" ]; then
+  if [ -d "$_root/.specify" ]; then
+    REPO_ROOT="$_root"
+  else
+    git_root="$(git rev-parse --show-toplevel 2>/dev/null || true)"
+    if [ -n "$git_root" ] && [ -d "$git_root/.specify" ]; then
+      REPO_ROOT="$git_root"
+    else
+      REPO_ROOT="$_root"
+    fi
+  fi
+fi
+
+exec "$REPO_ROOT/.specify/scripts/bash/update-agent-context.sh" gemini

src/specify_cli/integrations/tabnine/__init__.py

@@ -0,0 +1,21 @@
+"""Tabnine CLI integration."""
+
+from ..base import TomlIntegration
+
+
+class TabnineIntegration(TomlIntegration):
+    key = "tabnine"
+    config = {
+        "name": "Tabnine CLI",
+        "folder": ".tabnine/agent/",
+        "commands_subdir": "commands",
+        "install_url": "https://docs.tabnine.com/main/getting-started/tabnine-cli",
+        "requires_cli": True,
+    }
+    registrar_config = {
+        "dir": ".tabnine/agent/commands",
+        "format": "toml",
+        "args": "{{args}}",
+        "extension": ".toml",
+    }
+    context_file = "TABNINE.md"

src/specify_cli/integrations/tabnine/scripts/update-context.ps1

@@ -0,0 +1,23 @@
+# update-context.ps1 — Tabnine CLI integration: create/update TABNINE.md
+#
+# Thin wrapper that delegates to the shared update-agent-context script.
+# Activated in Stage 7 when the shared script uses integration.json dispatch.
+#
+# Until then, this delegates to the shared script as a subprocess.
+
+$ErrorActionPreference = 'Stop'
+
+# Derive repo root from script location (walks up to find .specify/)
+$scriptDir = Split-Path -Parent $MyInvocation.MyCommand.Definition
+$repoRoot = try { git rev-parse --show-toplevel 2>$null } catch { $null }
+# If git did not return a repo root, or the git root does not contain .specify,
+# fall back to walking up from the script directory to find the initialized project root.
+if (-not $repoRoot -or -not (Test-Path (Join-Path $repoRoot '.specify'))) {
+    $repoRoot = $scriptDir
+    $fsRoot = [System.IO.Path]::GetPathRoot($repoRoot)
+    while ($repoRoot -and $repoRoot -ne $fsRoot -and -not (Test-Path (Join-Path $repoRoot '.specify'))) {
+        $repoRoot = Split-Path -Parent $repoRoot
+    }
+}
+
+& "$repoRoot/.specify/scripts/powershell/update-agent-context.ps1" -AgentType tabnine

src/specify_cli/integrations/tabnine/scripts/update-context.sh

@@ -0,0 +1,28 @@
+#!/usr/bin/env bash
+# update-context.sh — Tabnine CLI integration: create/update TABNINE.md
+#
+# Thin wrapper that delegates to the shared update-agent-context script.
+# Activated in Stage 7 when the shared script uses integration.json dispatch.
+#
+# Until then, this delegates to the shared script as a subprocess.
+
+set -euo pipefail
+
+# Derive repo root from script location (walks up to find .specify/)
+_script_dir="$(cd "$(dirname "$0")" && pwd)"
+_root="$_script_dir"
+while [ "$_root" != "/" ] && [ ! -d "$_root/.specify" ]; do _root="$(dirname "$_root")"; done
+if [ -z "${REPO_ROOT:-}" ]; then
+  if [ -d "$_root/.specify" ]; then
+    REPO_ROOT="$_root"
+  else
+    git_root="$(git rev-parse --show-toplevel 2>/dev/null || true)"
+    if [ -n "$git_root" ] && [ -d "$git_root/.specify" ]; then
+      REPO_ROOT="$git_root"
+    else
+      REPO_ROOT="$_root"
+    fi
+  fi
+fi
+
+exec "$REPO_ROOT/.specify/scripts/bash/update-agent-context.sh" tabnine

tests/integrations/test_integration_base_toml.py

@@ -0,0 +1,346 @@
+"""Reusable test mixin for standard TomlIntegration subclasses.
+
+Each per-agent test file sets ``KEY``, ``FOLDER``, ``COMMANDS_SUBDIR``,
+``REGISTRAR_DIR``, and ``CONTEXT_FILE``, then inherits all verification
+logic from ``TomlIntegrationTests``.
+
+Mirrors ``MarkdownIntegrationTests`` closely — same test structure,
+adapted for TOML output format.
+"""
+
+import os
+
+from specify_cli.integrations import INTEGRATION_REGISTRY, get_integration
+from specify_cli.integrations.base import TomlIntegration
+from specify_cli.integrations.manifest import IntegrationManifest
+
+
+class TomlIntegrationTests:
+    """Mixin — set class-level constants and inherit these tests.
+
+    Required class attrs on subclass::
+
+        KEY: str              — integration registry key
+        FOLDER: str           — e.g. ".gemini/"
+        COMMANDS_SUBDIR: str  — e.g. "commands"
+        REGISTRAR_DIR: str    — e.g. ".gemini/commands"
+        CONTEXT_FILE: str     — e.g. "GEMINI.md"
+    """
+
+    KEY: str
+    FOLDER: str
+    COMMANDS_SUBDIR: str
+    REGISTRAR_DIR: str
+    CONTEXT_FILE: str
+
+    # -- Registration -----------------------------------------------------
+
+    def test_registered(self):
+        assert self.KEY in INTEGRATION_REGISTRY
+        assert get_integration(self.KEY) is not None
+
+    def test_is_toml_integration(self):
+        assert isinstance(get_integration(self.KEY), TomlIntegration)
+
+    # -- Config -----------------------------------------------------------
+
+    def test_config_folder(self):
+        i = get_integration(self.KEY)
+        assert i.config["folder"] == self.FOLDER
+
+    def test_config_commands_subdir(self):
+        i = get_integration(self.KEY)
+        assert i.config["commands_subdir"] == self.COMMANDS_SUBDIR
+
+    def test_registrar_config(self):
+        i = get_integration(self.KEY)
+        assert i.registrar_config["dir"] == self.REGISTRAR_DIR
+        assert i.registrar_config["format"] == "toml"
+        assert i.registrar_config["args"] == "{{args}}"
+        assert i.registrar_config["extension"] == ".toml"
+
+    def test_context_file(self):
+        i = get_integration(self.KEY)
+        assert i.context_file == self.CONTEXT_FILE
+
+    # -- Setup / teardown -------------------------------------------------
+
+    def test_setup_creates_files(self, tmp_path):
+        i = get_integration(self.KEY)
+        m = IntegrationManifest(self.KEY, tmp_path)
+        created = i.setup(tmp_path, m)
+        assert len(created) > 0
+        cmd_files = [f for f in created if "scripts" not in f.parts]
+        for f in cmd_files:
+            assert f.exists()
+            assert f.name.startswith("speckit.")
+            assert f.name.endswith(".toml")
+
+    def test_setup_writes_to_correct_directory(self, tmp_path):
+        i = get_integration(self.KEY)
+        m = IntegrationManifest(self.KEY, tmp_path)
+        created = i.setup(tmp_path, m)
+        expected_dir = i.commands_dest(tmp_path)
+        assert expected_dir.exists(), f"Expected directory {expected_dir} was not created"
+        cmd_files = [f for f in created if "scripts" not in f.parts]
+        assert len(cmd_files) > 0, "No command files were created"
+        for f in cmd_files:
+            assert f.resolve().parent == expected_dir.resolve(), (
+                f"{f} is not under {expected_dir}"
+            )
+
+    def test_templates_are_processed(self, tmp_path):
+        """Command files must have placeholders replaced and be valid TOML."""
+        i = get_integration(self.KEY)
+        m = IntegrationManifest(self.KEY, tmp_path)
+        created = i.setup(tmp_path, m)
+        cmd_files = [f for f in created if "scripts" not in f.parts]
+        assert len(cmd_files) > 0
+        for f in cmd_files:
+            content = f.read_text(encoding="utf-8")
+            assert "{SCRIPT}" not in content, f"{f.name} has unprocessed {{SCRIPT}}"
+            assert "__AGENT__" not in content, f"{f.name} has unprocessed __AGENT__"
+            assert "{ARGS}" not in content, f"{f.name} has unprocessed {{ARGS}}"
+
+    def test_toml_has_description(self, tmp_path):
+        """Every TOML command file should have a description key."""
+        i = get_integration(self.KEY)
+        m = IntegrationManifest(self.KEY, tmp_path)
+        created = i.setup(tmp_path, m)
+        cmd_files = [f for f in created if "scripts" not in f.parts]
+        for f in cmd_files:
+            content = f.read_text(encoding="utf-8")
+            assert 'description = "' in content, f"{f.name} missing description key"
+
+    def test_toml_has_prompt(self, tmp_path):
+        """Every TOML command file should have a prompt key."""
+        i = get_integration(self.KEY)
+        m = IntegrationManifest(self.KEY, tmp_path)
+        created = i.setup(tmp_path, m)
+        cmd_files = [f for f in created if "scripts" not in f.parts]
+        for f in cmd_files:
+            content = f.read_text(encoding="utf-8")
+            assert "prompt = " in content, f"{f.name} missing prompt key"
+
+    def test_toml_uses_correct_arg_placeholder(self, tmp_path):
+        """TOML commands must use {{args}} (from {ARGS} replacement)."""
+        i = get_integration(self.KEY)
+        m = IntegrationManifest(self.KEY, tmp_path)
+        created = i.setup(tmp_path, m)
+        cmd_files = [f for f in created if "scripts" not in f.parts]
+        # At least one file should contain {{args}} from the {ARGS} placeholder
+        has_args = any("{{args}}" in f.read_text(encoding="utf-8") for f in cmd_files)
+        assert has_args, "No TOML command file contains {{args}} placeholder"
+
+    def test_toml_is_valid(self, tmp_path):
+        """Every generated TOML file must parse without errors."""
+        try:
+            import tomllib
+        except ModuleNotFoundError:
+            import tomli as tomllib  # type: ignore[no-redef]
+
+        i = get_integration(self.KEY)
+        m = IntegrationManifest(self.KEY, tmp_path)
+        created = i.setup(tmp_path, m)
+        cmd_files = [f for f in created if "scripts" not in f.parts]
+        for f in cmd_files:
+            raw = f.read_bytes()
+            try:
+                parsed = tomllib.loads(raw.decode("utf-8"))
+            except Exception as exc:
+                raise AssertionError(f"{f.name} is not valid TOML: {exc}") from exc
+            assert "prompt" in parsed, f"{f.name} parsed TOML has no 'prompt' key"
+
+    def test_all_files_tracked_in_manifest(self, tmp_path):
+        i = get_integration(self.KEY)
+        m = IntegrationManifest(self.KEY, tmp_path)
+        created = i.setup(tmp_path, m)
+        for f in created:
+            rel = f.resolve().relative_to(tmp_path.resolve()).as_posix()
+            assert rel in m.files, f"{rel} not tracked in manifest"
+
+    def test_install_uninstall_roundtrip(self, tmp_path):
+        i = get_integration(self.KEY)
+        m = IntegrationManifest(self.KEY, tmp_path)
+        created = i.install(tmp_path, m)
+        assert len(created) > 0
+        m.save()
+        for f in created:
+            assert f.exists()
+        removed, skipped = i.uninstall(tmp_path, m)
+        assert len(removed) == len(created)
+        assert skipped == []
+
+    def test_modified_file_survives_uninstall(self, tmp_path):
+        i = get_integration(self.KEY)
+        m = IntegrationManifest(self.KEY, tmp_path)
+        created = i.install(tmp_path, m)
+        m.save()
+        modified_file = created[0]
+        modified_file.write_text("user modified this", encoding="utf-8")
+        removed, skipped = i.uninstall(tmp_path, m)
+        assert modified_file.exists()
+        assert modified_file in skipped
+
+    # -- Scripts ----------------------------------------------------------
+
+    def test_setup_installs_update_context_scripts(self, tmp_path):
+        i = get_integration(self.KEY)
+        m = IntegrationManifest(self.KEY, tmp_path)
+        created = i.setup(tmp_path, m)
+        scripts_dir = tmp_path / ".specify" / "integrations" / self.KEY / "scripts"
+        assert scripts_dir.is_dir(), f"Scripts directory not created for {self.KEY}"
+        assert (scripts_dir / "update-context.sh").exists()
+        assert (scripts_dir / "update-context.ps1").exists()
+
+    def test_scripts_tracked_in_manifest(self, tmp_path):
+        i = get_integration(self.KEY)
+        m = IntegrationManifest(self.KEY, tmp_path)
+        i.setup(tmp_path, m)
+        script_rels = [k for k in m.files if "update-context" in k]
+        assert len(script_rels) >= 2
+
+    def test_sh_script_is_executable(self, tmp_path):
+        i = get_integration(self.KEY)
+        m = IntegrationManifest(self.KEY, tmp_path)
+        i.setup(tmp_path, m)
+        sh = tmp_path / ".specify" / "integrations" / self.KEY / "scripts" / "update-context.sh"
+        assert os.access(sh, os.X_OK)
+
+    # -- CLI auto-promote -------------------------------------------------
+
+    def test_ai_flag_auto_promotes(self, tmp_path):
+        from typer.testing import CliRunner
+        from specify_cli import app
+
+        project = tmp_path / f"promote-{self.KEY}"
+        project.mkdir()
+        old_cwd = os.getcwd()
+        try:
+            os.chdir(project)
+            runner = CliRunner()
+            result = runner.invoke(app, [
+                "init", "--here", "--ai", self.KEY, "--script", "sh", "--no-git",
+                "--ignore-agent-tools",
+            ], catch_exceptions=False)
+        finally:
+            os.chdir(old_cwd)
+        assert result.exit_code == 0, f"init --ai {self.KEY} failed: {result.output}"
+        assert f"--integration {self.KEY}" in result.output
+
+    def test_integration_flag_creates_files(self, tmp_path):
+        from typer.testing import CliRunner
+        from specify_cli import app
+
+        project = tmp_path / f"int-{self.KEY}"
+        project.mkdir()
+        old_cwd = os.getcwd()
+        try:
+            os.chdir(project)
+            runner = CliRunner()
+            result = runner.invoke(app, [
+                "init", "--here", "--integration", self.KEY, "--script", "sh", "--no-git",
+                "--ignore-agent-tools",
+            ], catch_exceptions=False)
+        finally:
+            os.chdir(old_cwd)
+        assert result.exit_code == 0, f"init --integration {self.KEY} failed: {result.output}"
+        i = get_integration(self.KEY)
+        cmd_dir = i.commands_dest(project)
+        assert cmd_dir.is_dir(), f"Commands directory {cmd_dir} not created"
+        commands = sorted(cmd_dir.glob("speckit.*.toml"))
+        assert len(commands) > 0, f"No command files in {cmd_dir}"
+
+    # -- Complete file inventory ------------------------------------------
+
+    COMMAND_STEMS = [
+        "analyze", "checklist", "clarify", "constitution",
+        "implement", "plan", "specify", "tasks", "taskstoissues",
+    ]
+
+    def _expected_files(self, script_variant: str) -> list[str]:
+        """Build the expected file list for this integration + script variant."""
+        i = get_integration(self.KEY)
+        cmd_dir = i.registrar_config["dir"]
+        files = []
+
+        # Command files (.toml)
+        for stem in self.COMMAND_STEMS:
+            files.append(f"{cmd_dir}/speckit.{stem}.toml")
+
+        # Integration scripts
+        files.append(f".specify/integrations/{self.KEY}/scripts/update-context.ps1")
+        files.append(f".specify/integrations/{self.KEY}/scripts/update-context.sh")
+
+        # Framework files
+        files.append(f".specify/integration.json")
+        files.append(f".specify/init-options.json")
+        files.append(f".specify/integrations/{self.KEY}.manifest.json")
+        files.append(f".specify/integrations/speckit.manifest.json")
+
+        if script_variant == "sh":
+            for name in ["check-prerequisites.sh", "common.sh", "create-new-feature.sh",
+                         "setup-plan.sh", "update-agent-context.sh"]:
+                files.append(f".specify/scripts/bash/{name}")
+        else:
+            for name in ["check-prerequisites.ps1", "common.ps1", "create-new-feature.ps1",
+                         "setup-plan.ps1", "update-agent-context.ps1"]:
+                files.append(f".specify/scripts/powershell/{name}")
+
+        for name in ["agent-file-template.md", "checklist-template.md",
+                     "constitution-template.md", "plan-template.md",
+                     "spec-template.md", "tasks-template.md"]:
+            files.append(f".specify/templates/{name}")
+
+        files.append(".specify/memory/constitution.md")
+        return sorted(files)
+
+    def test_complete_file_inventory_sh(self, tmp_path):
+        """Every file produced by specify init --integration <key> --script sh."""
+        from typer.testing import CliRunner
+        from specify_cli import app
+
+        project = tmp_path / f"inventory-sh-{self.KEY}"
+        project.mkdir()
+        old_cwd = os.getcwd()
+        try:
+            os.chdir(project)
+            result = CliRunner().invoke(app, [
+                "init", "--here", "--integration", self.KEY, "--script", "sh",
+                "--no-git", "--ignore-agent-tools",
+            ], catch_exceptions=False)
+        finally:
+            os.chdir(old_cwd)
+        assert result.exit_code == 0, f"init failed: {result.output}"
+        actual = sorted(p.relative_to(project).as_posix()
+                        for p in project.rglob("*") if p.is_file())
+        expected = self._expected_files("sh")
+        assert actual == expected, (
+            f"Missing: {sorted(set(expected) - set(actual))}\n"
+            f"Extra: {sorted(set(actual) - set(expected))}"
+        )
+
+    def test_complete_file_inventory_ps(self, tmp_path):
+        """Every file produced by specify init --integration <key> --script ps."""
+        from typer.testing import CliRunner
+        from specify_cli import app
+
+        project = tmp_path / f"inventory-ps-{self.KEY}"
+        project.mkdir()
+        old_cwd = os.getcwd()
+        try:
+            os.chdir(project)
+            result = CliRunner().invoke(app, [
+                "init", "--here", "--integration", self.KEY, "--script", "ps",
+                "--no-git", "--ignore-agent-tools",
+            ], catch_exceptions=False)
+        finally:
+            os.chdir(old_cwd)
+        assert result.exit_code == 0, f"init failed: {result.output}"
+        actual = sorted(p.relative_to(project).as_posix()
+                        for p in project.rglob("*") if p.is_file())
+        expected = self._expected_files("ps")
+        assert actual == expected, (
+            f"Missing: {sorted(set(expected) - set(actual))}\n"
+            f"Extra: {sorted(set(actual) - set(expected))}"
+        )

tests/integrations/test_integration_gemini.py

@@ -0,0 +1,11 @@
+"""Tests for GeminiIntegration."""
+
+from .test_integration_base_toml import TomlIntegrationTests
+
+
+class TestGeminiIntegration(TomlIntegrationTests):
+    KEY = "gemini"
+    FOLDER = ".gemini/"
+    COMMANDS_SUBDIR = "commands"
+    REGISTRAR_DIR = ".gemini/commands"
+    CONTEXT_FILE = "GEMINI.md"

tests/integrations/test_integration_tabnine.py

@@ -0,0 +1,11 @@
+"""Tests for TabnineIntegration."""
+
+from .test_integration_base_toml import TomlIntegrationTests
+
+
+class TestTabnineIntegration(TomlIntegrationTests):
+    KEY = "tabnine"
+    FOLDER = ".tabnine/agent/"
+    COMMANDS_SUBDIR = "commands"
+    REGISTRAR_DIR = ".tabnine/agent/commands"
+    CONTEXT_FILE = "TABNINE.md"