fix: improve docs and command help for analzye-complexity

Co-authored-by: Ralph Khreish <35776126+Crunchyman-ralph@users.noreply.github.com>

.changeset/chore-fix-docs.md

@@ -0,0 +1,5 @@
+---
+"task-master-ai": patch
+---
+
+Improve `analyze-complexity` cli docs and `--research` flag documentation

.changeset/config.json

@@ -11,6 +11,9 @@
   "access": "public",
   "baseBranch": "main",
   "ignore": [
-    "docs"
+    "docs",
+    "@tm/cli",
+    "@tm/core",
+    "@tm/build-config"
   ]
 }

.changeset/mcp-timeout-configuration.md

@@ -0,0 +1,13 @@
+---
+"task-master-ai": minor
+---
+
+Enhanced Roo Code profile with MCP timeout configuration for improved reliability during long-running AI operations. The Roo profile now automatically configures a 300-second timeout for MCP server operations, preventing timeouts during complex tasks like `parse-prd`, `expand-all`, `analyze-complexity`, and `research` operations. This change also replaces static MCP configuration files with programmatic generation for better maintainability.
+
+**What's New:**
+- 300-second timeout for MCP operations (up from default 60 seconds)
+- Programmatic MCP configuration generation (replaces static asset files)
+- Enhanced reliability for AI-powered operations
+- Consistent with other AI coding assistant profiles
+
+**Migration:** No user action required - existing Roo Code installations will automatically receive the enhanced MCP configuration on next initialization.

.changeset/petite-ideas-grab.md

@@ -0,0 +1,5 @@
+---
+"task-master-ai": patch
+---
+
+Fix Claude Code settings validation for pathToClaudeCodeExecutable

.manypkg.json

@@ -1,6 +0,0 @@
-{
-	"$schema": "https://unpkg.com/@manypkg/get-packages@1.1.3/schema.json",
-	"defaultBranch": "main",
-	"ignoredRules": ["ROOT_HAS_DEPENDENCIES", "INTERNAL_MISMATCH"],
-	"ignoredPackages": ["@tm/core", "@tm/cli", "@tm/build-config"]
-}

CHANGELOG.md

@@ -1,41 +1,5 @@
 # task-master-ai
 
-## 0.27.3
-
-### Patch Changes
-
-- [#1254](https://github.com/eyaltoledano/claude-task-master/pull/1254) [`af53525`](https://github.com/eyaltoledano/claude-task-master/commit/af53525cbc660a595b67d4bb90d906911c71f45d) Thanks [@Crunchyman-ralph](https://github.com/Crunchyman-ralph)! - Fixed issue where `tm show` command could not find subtasks using dotted notation IDs (e.g., '8.1').
-  - The command now properly searches within parent task subtasks and returns the correct subtask information.
-
-## 0.27.2
-
-### Patch Changes
-
-- [#1248](https://github.com/eyaltoledano/claude-task-master/pull/1248) [`044a7bf`](https://github.com/eyaltoledano/claude-task-master/commit/044a7bfc98049298177bc655cf341d7a8b6a0011) Thanks [@Crunchyman-ralph](https://github.com/Crunchyman-ralph)! - Fix set-status for subtasks:
-  - Parent tasks are now set as `done` when subtasks are all `done`
-  - Parent tasks are now set as `in-progress` when at least one subtask is `in-progress` or `done`
-
-## 0.27.1
-
-### Patch Changes
-
-- [#1232](https://github.com/eyaltoledano/claude-task-master/pull/1232) [`f487736`](https://github.com/eyaltoledano/claude-task-master/commit/f487736670ef8c484059f676293777eabb249c9e) Thanks [@Crunchyman-ralph](https://github.com/Crunchyman-ralph)! - Fix module not found for new 0.27.0 release
-
-- [#1233](https://github.com/eyaltoledano/claude-task-master/pull/1233) [`c911608`](https://github.com/eyaltoledano/claude-task-master/commit/c911608f60454253f4e024b57ca84e5a5a53f65c) Thanks [@Crunchyman-ralph](https://github.com/Crunchyman-ralph)! - Fix Zed MCP configuration by adding required "source" property
-  - Add "source": "custom" property to task-master-ai server in Zed settings.json
-
-## 0.27.1-rc.1
-
-### Patch Changes
-
-- [#1233](https://github.com/eyaltoledano/claude-task-master/pull/1233) [`1a18794`](https://github.com/eyaltoledano/claude-task-master/commit/1a1879483b86c118a4e46c02cbf4acebfcf6bcf9) Thanks [@Crunchyman-ralph](https://github.com/Crunchyman-ralph)! - One last testing final final
-
-## 0.27.1-rc.0
-
-### Patch Changes
-
-- [#1232](https://github.com/eyaltoledano/claude-task-master/pull/1232) [`f487736`](https://github.com/eyaltoledano/claude-task-master/commit/f487736670ef8c484059f676293777eabb249c9e) Thanks [@Crunchyman-ralph](https://github.com/Crunchyman-ralph)! - Fix module not found for new 0.27.0 release
-
 ## 0.27.0
 
 ### Minor Changes

apps/cli/CHANGELOG.md

@@ -1,12 +1,5 @@
 # @tm/cli
 
-## null
-
-### Patch Changes
-
-- Updated dependencies []:
-  - @tm/core@null
-
 ## 0.27.0
 
 ### Patch Changes

apps/cli/package.json

@@ -1,5 +1,6 @@
 {
 	"name": "@tm/cli",
+	"version": "0.27.0",
 	"description": "Task Master CLI - Command line interface for task management",
 	"type": "module",
 	"private": true,
@@ -23,12 +24,12 @@
 	},
 	"dependencies": {
 		"@tm/core": "*",
-		"boxen": "^8.0.1",
+		"boxen": "^7.1.1",
 		"chalk": "5.6.2",
 		"cli-table3": "^0.6.5",
 		"commander": "^12.1.0",
-		"inquirer": "^12.5.0",
-		"ora": "^8.2.0"
+		"inquirer": "^9.2.10",
+		"ora": "^8.1.0"
 	},
 	"devDependencies": {
 		"@biomejs/biome": "^1.9.4",

apps/cli/src/index.ts

@@ -18,8 +18,7 @@ export * as ui from './utils/ui.js';
 export {
 	checkForUpdate,
 	performAutoUpdate,
-	displayUpgradeNotification,
-	compareVersions
+	displayUpgradeNotification
 } from './utils/auto-update.js';
 
 // Re-export commonly used types from tm-core

apps/cli/src/utils/auto-update.ts

@@ -7,6 +7,7 @@ import https from 'https';
 import chalk from 'chalk';
 import ora from 'ora';
 import boxen from 'boxen';
+import packageJson from '../../../../package.json' with { type: 'json' };
 
 export interface UpdateInfo {
 	currentVersion: string;
@@ -15,18 +16,15 @@ export interface UpdateInfo {
 }
 
 /**
- * Get current version from build-time injected environment variable
+ * Get current version from package.json
  */
 function getCurrentVersion(): string {
-	// Version is injected at build time via TM_PUBLIC_VERSION
-	const version = process.env.TM_PUBLIC_VERSION;
-	if (version && version !== 'unknown') {
-		return version;
+	try {
+		return packageJson.version;
+	} catch (error) {
+		console.warn('Could not read package.json for version info');
+		return '0.0.0';
 	}
-
-	// Fallback for development or if injection failed
-	console.warn('Could not read version from TM_PUBLIC_VERSION, using fallback');
-	return '0.0.0';
 }
 
 /**
@@ -35,7 +33,7 @@ function getCurrentVersion(): string {
  * @param v2 - Second version
  * @returns -1 if v1 < v2, 0 if v1 = v2, 1 if v1 > v2
  */
-export function compareVersions(v1: string, v2: string): number {
+function compareVersions(v1: string, v2: string): number {
 	const toParts = (v: string) => {
 		const [core, pre = ''] = v.split('-', 2);
 		const nums = core.split('.').map((n) => Number.parseInt(n, 10) || 0);

apps/docs/CHANGELOG.md

@@ -1,7 +1,5 @@
 # docs
 
-## 0.0.4
-
 ## 0.0.3
 
 ## 0.0.2

apps/docs/capabilities/cli-root-commands.mdx

@@ -156,7 +156,7 @@ sidebarTitle: "CLI Commands"
     # Use an alternative tasks file
     task-master analyze-complexity --file=custom-tasks.json
 
-    # Use Perplexity AI for research-backed complexity analysis
+    # Use your configured research model for research-backed complexity analysis
     task-master analyze-complexity --research
     ```
   </Accordion>

apps/docs/getting-started/quick-start/tasks-quick.mdx

@@ -61,9 +61,25 @@ Task Master can provide a complexity report which can be helpful to read before
 Can you analyze the complexity of our tasks to help me understand which ones need to be broken down further?
 ```
 
+The agent will use the `analyze_project_complexity` MCP tool, or you can run it directly with the CLI command:
+```bash
+task-master analyze-complexity
+```
+
+For more comprehensive analysis using your configured research model, you can use:
+```bash
+task-master analyze-complexity --research
+```
+
+<Tip>
+The `--research` flag uses whatever research model you have configured in `.taskmaster/config.json` (configurable via `task-master models --setup`) for research-backed complexity analysis, providing more informed recommendations.
+</Tip>
+
 You can view the report in a friendly table using:
 ```
 Can you show me the complexity report in a more readable format?
 ```
 
+For more detailed CLI options, see the [Analyze Task Complexity](/docs/capabilities/cli-root-commands#analyze-task-complexity) section.
+
 <Check>Now you are ready to begin [executing tasks](/docs/getting-started/quick-start/execute-quick)</Check>

apps/docs/package.json

@@ -1,6 +1,6 @@
 {
 	"name": "docs",
-	"version": "0.0.4",
+	"version": "0.0.3",
 	"private": true,
 	"description": "Task Master documentation powered by Mintlify",
 	"scripts": {

apps/extension/CHANGELOG.md

@@ -1,40 +1,5 @@
 # Change Log
 
-## 0.25.4
-
-### Patch Changes
-
-- Updated dependencies [[`af53525`](https://github.com/eyaltoledano/claude-task-master/commit/af53525cbc660a595b67d4bb90d906911c71f45d)]:
-  - task-master-ai@0.27.3
-
-## 0.25.3
-
-### Patch Changes
-
-- Updated dependencies [[`044a7bf`](https://github.com/eyaltoledano/claude-task-master/commit/044a7bfc98049298177bc655cf341d7a8b6a0011)]:
-  - task-master-ai@0.27.2
-
-## 0.25.2
-
-### Patch Changes
-
-- Updated dependencies [[`f487736`](https://github.com/eyaltoledano/claude-task-master/commit/f487736670ef8c484059f676293777eabb249c9e), [`c911608`](https://github.com/eyaltoledano/claude-task-master/commit/c911608f60454253f4e024b57ca84e5a5a53f65c), [`1a18794`](https://github.com/eyaltoledano/claude-task-master/commit/1a1879483b86c118a4e46c02cbf4acebfcf6bcf9)]:
-  - task-master-ai@0.27.1
-
-## 0.25.2-rc.1
-
-### Patch Changes
-
-- Updated dependencies [[`1a18794`](https://github.com/eyaltoledano/claude-task-master/commit/1a1879483b86c118a4e46c02cbf4acebfcf6bcf9)]:
-  - task-master-ai@0.27.1-rc.1
-
-## 0.25.2-rc.0
-
-### Patch Changes
-
-- Updated dependencies [[`f487736`](https://github.com/eyaltoledano/claude-task-master/commit/f487736670ef8c484059f676293777eabb249c9e)]:
-  - task-master-ai@0.27.1-rc.0
-
 ## 0.25.0
 
 ### Minor Changes

apps/extension/package.json

@@ -3,7 +3,7 @@
 	"private": true,
 	"displayName": "TaskMaster",
 	"description": "A visual Kanban board interface for TaskMaster projects in VS Code",
-	"version": "0.25.4",
+	"version": "0.25.0",
 	"publisher": "Hamster",
 	"icon": "assets/icon.png",
 	"engines": {
@@ -240,7 +240,7 @@
 		"check-types": "tsc --noEmit"
 	},
 	"dependencies": {
-		"task-master-ai": "0.27.3"
+		"task-master-ai": "*"
 	},
 	"devDependencies": {
 		"@dnd-kit/core": "^6.3.1",
@@ -254,9 +254,8 @@
 		"@radix-ui/react-separator": "^1.1.7",
 		"@radix-ui/react-slot": "^1.2.3",
 		"@tailwindcss/postcss": "^4.1.11",
-		"@tanstack/react-query": "^5.83.0",
 		"@types/mocha": "^10.0.10",
-		"@types/node": "^22.10.5",
+		"@types/node": "20.x",
 		"@types/react": "19.1.8",
 		"@types/react-dom": "19.1.6",
 		"@types/vscode": "^1.101.0",
@@ -272,11 +271,12 @@
 		"lucide-react": "^0.525.0",
 		"npm-run-all": "^4.1.5",
 		"postcss": "8.5.6",
-		"react": "^19.0.0",
-		"react-dom": "^19.0.0",
 		"tailwind-merge": "^3.3.1",
 		"tailwindcss": "4.1.11",
-		"typescript": "^5.7.3"
+		"typescript": "^5.8.3",
+		"@tanstack/react-query": "^5.83.0",
+		"react": "^19.0.0",
+		"react-dom": "^19.0.0"
 	},
 	"overrides": {
 		"glob@<8": "^10.4.5",

docs/configuration.md

@@ -235,6 +235,60 @@ node scripts/init.js
    - "MCP provider requires session context" → Ensure running in MCP environment
    - See the [MCP Provider Guide](./mcp-provider-guide.md) for detailed troubleshooting
 
+### MCP Timeout Configuration
+
+Long-running AI operations in taskmaster-ai can exceed the default 60-second MCP timeout. Operations like `parse_prd`, `expand_task`, `research`, and `analyze_project_complexity` may take 2-5 minutes to complete.
+
+#### Adding Timeout Configuration
+
+Add a `timeout` parameter to your MCP configuration to extend the timeout limit. The timeout configuration works identically across MCP clients including Cursor, Windsurf, and RooCode:
+
+```json
+{
+  "mcpServers": {
+    "task-master-ai": {
+      "command": "npx",
+      "args": ["-y", "--package=task-master-ai", "task-master-ai"],
+      "timeout": 300,
+      "env": {
+        "ANTHROPIC_API_KEY": "your-anthropic-api-key"
+      }
+    }
+  }
+}
+```
+
+**Configuration Details:**
+- **`timeout: 300`** - Sets timeout to 300 seconds (5 minutes)
+- **Value range**: 1-3600 seconds (1 second to 1 hour)
+- **Recommended**: 300 seconds provides sufficient time for most AI operations
+- **Format**: Integer value in seconds (not milliseconds)
+
+#### Automatic Setup
+
+When adding taskmaster rules for supported editors, the timeout configuration is automatically included:
+
+```bash
+# Automatically includes timeout configuration
+task-master rules add cursor
+task-master rules add roo
+task-master rules add windsurf
+task-master rules add vscode
+```
+
+#### Troubleshooting Timeouts
+
+If you're still experiencing timeout errors:
+
+1. **Verify configuration**: Check that `timeout: 300` is present in your MCP config
+2. **Restart editor**: Restart your editor after making configuration changes
+3. **Increase timeout**: For very complex operations, try `timeout: 600` (10 minutes)
+4. **Check API keys**: Ensure required API keys are properly configured
+
+**Expected behavior:**
+- **Before fix**: Operations fail after 60 seconds with `MCP request timed out after 60000ms`
+- **After fix**: Operations complete successfully within the configured timeout limit
+
 ### Google Vertex AI Configuration
 
 Google Vertex AI is Google Cloud's enterprise AI platform and requires specific configuration:

package-lock.json

@@ -1,12 +1,12 @@
 {
 	"name": "task-master-ai",
-	"version": "0.27.3",
+	"version": "0.27.0",
 	"lockfileVersion": 3,
 	"requires": true,
 	"packages": {
 		"": {
 			"name": "task-master-ai",
-			"version": "0.27.3",
+			"version": "0.27.0",
 			"license": "MIT WITH Commons-Clause",
 			"workspaces": [
 				"apps/*",
@@ -29,7 +29,6 @@
 				"@inquirer/search": "^3.0.15",
 				"@openrouter/ai-sdk-provider": "^0.4.5",
 				"@streamparser/json": "^0.0.22",
-				"@supabase/supabase-js": "^2.57.4",
 				"ai": "^4.3.10",
 				"ajv": "^8.17.1",
 				"ajv-formats": "^3.0.1",
@@ -38,7 +37,7 @@
 				"cli-highlight": "^2.1.11",
 				"cli-progress": "^3.12.0",
 				"cli-table3": "^0.6.5",
-				"commander": "^12.1.0",
+				"commander": "^11.1.0",
 				"cors": "^2.8.5",
 				"dotenv": "^16.3.1",
 				"express": "^4.21.2",
@@ -71,7 +70,6 @@
 				"@biomejs/biome": "^1.9.4",
 				"@changesets/changelog-github": "^0.5.1",
 				"@changesets/cli": "^2.28.1",
-				"@manypkg/cli": "^0.25.1",
 				"@tm/cli": "*",
 				"@types/jest": "^29.5.14",
 				"@types/marked-terminal": "^6.1.1",
@@ -86,9 +84,9 @@
 				"supertest": "^7.1.0",
 				"ts-jest": "^29.4.2",
 				"tsdown": "^0.15.2",
-				"tsx": "^4.20.4",
+				"tsx": "^4.16.2",
 				"turbo": "^2.5.6",
-				"typescript": "^5.7.3"
+				"typescript": "^5.9.2"
 			},
 			"engines": {
 				"node": ">=18.0.0"
@@ -101,15 +99,16 @@
 		},
 		"apps/cli": {
 			"name": "@tm/cli",
+			"version": "0.27.0",
 			"license": "MIT",
 			"dependencies": {
 				"@tm/core": "*",
-				"boxen": "^8.0.1",
+				"boxen": "^7.1.1",
 				"chalk": "5.6.2",
 				"cli-table3": "^0.6.5",
 				"commander": "^12.1.0",
-				"inquirer": "^12.5.0",
-				"ora": "^8.2.0"
+				"inquirer": "^9.2.10",
+				"ora": "^8.1.0"
 			},
 			"devDependencies": {
 				"@biomejs/biome": "^1.9.4",
@@ -190,6 +189,15 @@
 			"integrity": "sha512-dOy+3AuW3a2wNbZHIuMZpTcgjGuLU/uBL/ubcZF9OXbDo8ff4O8yVp5Bf0efS8uEoYo5q4Fx7dY9OgQGXgAsQA==",
 			"license": "MIT"
 		},
+		"apps/cli/node_modules/commander": {
+			"version": "12.1.0",
+			"resolved": "https://registry.npmjs.org/commander/-/commander-12.1.0.tgz",
+			"integrity": "sha512-Vw8qHK3bZM9y/P10u3Vib8o/DdkvA2OtPtZvD871QKjy74Wj1WSKFILMPRPSdUSx5RFK1arlJzEtA4PkFgnbuA==",
+			"license": "MIT",
+			"engines": {
+				"node": ">=18"
+			}
+		},
 		"apps/cli/node_modules/emoji-regex": {
 			"version": "8.0.0",
 			"resolved": "https://registry.npmjs.org/emoji-regex/-/emoji-regex-8.0.0.tgz",
@@ -351,15 +359,15 @@
 			}
 		},
 		"apps/docs": {
-			"version": "0.0.4",
+			"version": "0.0.3",
 			"devDependencies": {
 				"mintlify": "^4.2.111"
 			}
 		},
 		"apps/extension": {
-			"version": "0.25.4",
+			"version": "0.25.0",
 			"dependencies": {
-				"task-master-ai": "0.27.3"
+				"task-master-ai": "*"
 			},
 			"devDependencies": {
 				"@dnd-kit/core": "^6.3.1",
@@ -375,7 +383,7 @@
 				"@tailwindcss/postcss": "^4.1.11",
 				"@tanstack/react-query": "^5.83.0",
 				"@types/mocha": "^10.0.10",
-				"@types/node": "^22.10.5",
+				"@types/node": "20.x",
 				"@types/react": "19.1.8",
 				"@types/react-dom": "19.1.6",
 				"@types/vscode": "^1.101.0",
@@ -395,7 +403,7 @@
 				"react-dom": "^19.0.0",
 				"tailwind-merge": "^3.3.1",
 				"tailwindcss": "4.1.11",
-				"typescript": "^5.7.3"
+				"typescript": "^5.8.3"
 			},
 			"engines": {
 				"vscode": "^1.93.0"
@@ -5391,101 +5399,6 @@
 			"dev": true,
 			"license": "MIT"
 		},
-		"node_modules/@manypkg/cli": {
-			"version": "0.25.1",
-			"resolved": "https://registry.npmjs.org/@manypkg/cli/-/cli-0.25.1.tgz",
-			"integrity": "sha512-lag906FyiNxzZjsRErkUD5/to174I2JzPk5bZubuJp6loMKKJn73zrtqeU7nHlVkHBg3tgXDTJj22HxUDxLRXw==",
-			"dev": true,
-			"license": "MIT",
-			"dependencies": {
-				"@manypkg/get-packages": "^3.1.0",
-				"detect-indent": "^7.0.1",
-				"normalize-path": "^3.0.0",
-				"p-limit": "^6.2.0",
-				"package-json": "^10.0.1",
-				"parse-github-url": "^1.0.3",
-				"picocolors": "^1.1.1",
-				"sembear": "^0.7.0",
-				"semver": "^7.7.1",
-				"tinyexec": "^1.0.1",
-				"validate-npm-package-name": "^6.0.0"
-			},
-			"bin": {
-				"manypkg": "bin.js"
-			},
-			"engines": {
-				"node": ">=20.0.0"
-			}
-		},
-		"node_modules/@manypkg/cli/node_modules/@manypkg/find-root": {
-			"version": "3.1.0",
-			"resolved": "https://registry.npmjs.org/@manypkg/find-root/-/find-root-3.1.0.tgz",
-			"integrity": "sha512-BcSqCyKhBVZ5YkSzOiheMCV41kqAFptW6xGqYSTjkVTl9XQpr+pqHhwgGCOHQtjDCv7Is6EFyA14Sm5GVbVABA==",
-			"dev": true,
-			"license": "MIT",
-			"dependencies": {
-				"@manypkg/tools": "^2.1.0"
-			},
-			"engines": {
-				"node": ">=20.0.0"
-			}
-		},
-		"node_modules/@manypkg/cli/node_modules/@manypkg/get-packages": {
-			"version": "3.1.0",
-			"resolved": "https://registry.npmjs.org/@manypkg/get-packages/-/get-packages-3.1.0.tgz",
-			"integrity": "sha512-0TbBVyvPrP7xGYBI/cP8UP+yl/z+HtbTttAD7FMAJgn/kXOTwh5/60TsqP9ZYY710forNfyV0N8P/IE/ujGZJg==",
-			"dev": true,
-			"license": "MIT",
-			"dependencies": {
-				"@manypkg/find-root": "^3.1.0",
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@@ -14304,12 +14137,12 @@
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 			"license": "MIT",
 			"engines": {
-				"node": ">=18"
+				"node": ">=16"
 			}
 		},
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 		"node_modules/consola": {
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 			"dev": true,
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+			"optional": true,
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@@ -18902,7 +18725,8 @@
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 			"dev": true,
-			"license": "ISC"
+			"license": "ISC",
+			"optional": true
 		},
 		"node_modules/ink": {
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@@ -21870,13 +21694,6 @@
 				"jiti": "lib/jiti-cli.mjs"
 			}
 		},
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-			"funding": {
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@@ -25435,25 +25239,6 @@
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-			"funding": {
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 		"node_modules/package-json-from-dist": {
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@@ -25517,19 +25302,6 @@
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 		},
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-			"dev": true,
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-			"bin": {
-				"parse-github-url": "cli.js"
-			},
-			"engines": {
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@@ -26175,13 +25947,6 @@
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 			}
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-			"dev": true,
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 		"node_modules/protobufjs": {
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@@ -26518,6 +26283,7 @@
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 			"dev": true,
 			"license": "(BSD-2-Clause OR MIT OR Apache-2.0)",
+			"optional": true,
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@@ -26534,6 +26300,7 @@
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 			"dev": true,
 			"license": "MIT",
+			"optional": true,
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 			}
@@ -26950,35 +26717,6 @@
 				"url": "https://github.com/sponsors/ljharb"
 			}
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-		"node_modules/registry-url": {
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-			"funding": {
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-		},
 		"node_modules/rehype-katex": {
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@@ -27788,16 +27526,6 @@
 				"url": "https://ko-fi.com/killymxi"
 			}
 		},
-		"node_modules/sembear": {
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-			"license": "MIT",
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 		"node_modules/semver": {
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@@ -30757,16 +30485,6 @@
 				"spdx-expression-parse": "^3.0.0"
 			}
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-			"dev": true,
-			"license": "ISC",
-			"engines": {
-				"node": "^18.17.0 || >=20.5.0"
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 		"node_modules/vary": {
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 			"resolved": "https://registry.npmjs.org/vary/-/vary-1.1.2.tgz",
@@ -32155,6 +31873,7 @@
 		},
 		"packages/build-config": {
 			"name": "@tm/build-config",
+			"version": "1.0.1",
 			"license": "MIT",
 			"dependencies": {
 				"tsup": "^8.5.0"
@@ -32166,21 +31885,22 @@
 		},
 		"packages/tm-core": {
 			"name": "@tm/core",
+			"version": "0.26.1",
 			"license": "MIT",
 			"dependencies": {
 				"@supabase/supabase-js": "^2.57.4",
-				"zod": "^3.23.8"
+				"zod": "^3.22.4"
 			},
 			"devDependencies": {
 				"@biomejs/biome": "^1.9.4",
 				"@tm/build-config": "*",
-				"@types/node": "^22.10.5",
+				"@types/node": "^20.11.30",
 				"@vitest/coverage-v8": "^2.0.5",
-				"dotenv-mono": "^1.5.1",
+				"dotenv-mono": "^1.3.14",
 				"ts-node": "^10.9.2",
 				"tsup": "^8.5.0",
-				"typescript": "^5.7.3",
-				"vitest": "^2.1.8"
+				"typescript": "^5.4.3",
+				"vitest": "^2.0.5"
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 			"engines": {
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package.json

@@ -1,6 +1,6 @@
 {
 	"name": "task-master-ai",
-	"version": "0.27.3",
+	"version": "0.27.0",
 	"description": "A task management system for ambitious AI-driven development that doesn't overwhelm and confuse Cursor.",
 	"main": "index.js",
 	"type": "module",
@@ -33,9 +33,7 @@
 		"inspector": "npx @modelcontextprotocol/inspector node dist/mcp-server.js",
 		"mcp-server": "node dist/mcp-server.js",
 		"format-check": "biome format .",
-		"format": "biome format . --write",
-		"deps:check": "manypkg check || echo 'Note: Workspace package version warnings are expected for internal @tm/* packages'",
-		"deps:fix": "manypkg fix"
+		"format": "biome format . --write"
 	},
 	"keywords": [
 		"claude",
@@ -67,7 +65,6 @@
 		"@inquirer/search": "^3.0.15",
 		"@openrouter/ai-sdk-provider": "^0.4.5",
 		"@streamparser/json": "^0.0.22",
-		"@supabase/supabase-js": "^2.57.4",
 		"ai": "^4.3.10",
 		"ajv": "^8.17.1",
 		"ajv-formats": "^3.0.1",
@@ -76,7 +73,7 @@
 		"cli-highlight": "^2.1.11",
 		"cli-progress": "^3.12.0",
 		"cli-table3": "^0.6.5",
-		"commander": "^12.1.0",
+		"commander": "^11.1.0",
 		"cors": "^2.8.5",
 		"dotenv": "^16.3.1",
 		"express": "^4.21.2",
@@ -123,11 +120,10 @@
 		"whatwg-url": "^11.0.0"
 	},
 	"devDependencies": {
+		"@tm/cli": "*",
 		"@biomejs/biome": "^1.9.4",
 		"@changesets/changelog-github": "^0.5.1",
 		"@changesets/cli": "^2.28.1",
-		"@manypkg/cli": "^0.25.1",
-		"@tm/cli": "*",
 		"@types/jest": "^29.5.14",
 		"@types/marked-terminal": "^6.1.1",
 		"concurrently": "^9.2.1",
@@ -141,8 +137,8 @@
 		"supertest": "^7.1.0",
 		"ts-jest": "^29.4.2",
 		"tsdown": "^0.15.2",
-		"tsx": "^4.20.4",
+		"tsx": "^4.16.2",
 		"turbo": "^2.5.6",
-		"typescript": "^5.7.3"
+		"typescript": "^5.9.2"
 	}
 }

packages/build-config/CHANGELOG.md

@@ -1,5 +1,3 @@
 # @tm/build-config
 
-## null
-
 ## 1.0.1

packages/build-config/package.json

@@ -1,5 +1,6 @@
 {
 	"name": "@tm/build-config",
+	"version": "1.0.1",
 	"description": "Shared build configuration for Task Master monorepo",
 	"type": "module",
 	"private": true,

packages/tm-core/CHANGELOG.md

@@ -1,7 +1,5 @@
 # Changelog
 
-## null
-
 ## 0.26.1
 
 All notable changes to the @task-master/tm-core package will be documented in this file.

packages/tm-core/package.json

@@ -1,5 +1,6 @@
 {
 	"name": "@tm/core",
+	"version": "0.26.1",
 	"private": true,
 	"description": "Core library for Task Master - TypeScript task management system",
 	"type": "module",
@@ -31,18 +32,18 @@
 	},
 	"dependencies": {
 		"@supabase/supabase-js": "^2.57.4",
-		"zod": "^3.23.8"
+		"zod": "^3.22.4"
 	},
 	"devDependencies": {
 		"@biomejs/biome": "^1.9.4",
 		"@tm/build-config": "*",
-		"@types/node": "^22.10.5",
+		"@types/node": "^20.11.30",
 		"@vitest/coverage-v8": "^2.0.5",
-		"dotenv-mono": "^1.5.1",
+		"dotenv-mono": "^1.3.14",
 		"ts-node": "^10.9.2",
 		"tsup": "^8.5.0",
-		"typescript": "^5.7.3",
-		"vitest": "^2.1.8"
+		"typescript": "^5.4.3",
+		"vitest": "^2.0.5"
 	},
 	"engines": {
 		"node": ">=18.0.0"

packages/tm-core/src/interfaces/storage.interface.ts

@@ -3,17 +3,7 @@
  * This file defines the contract for all storage implementations
  */
 
-import type { Task, TaskMetadata, TaskStatus } from '../types/index.js';
-
-/**
- * Result type for updateTaskStatus operations
- */
-export interface UpdateStatusResult {
-	success: boolean;
-	oldStatus: TaskStatus;
-	newStatus: TaskStatus;
-	taskId: string;
-}
+import type { Task, TaskMetadata } from '../types/index.js';
 
 /**
  * Interface for storage operations on tasks
@@ -64,19 +54,6 @@ export interface IStorage {
 		tag?: string
 	): Promise<void>;
 
-	/**
-	 * Update task or subtask status by ID
-	 * @param taskId - ID of the task or subtask (e.g., "1" or "1.2")
-	 * @param newStatus - New status to set
-	 * @param tag - Optional tag context for the task
-	 * @returns Promise that resolves to update result with old and new status
-	 */
-	updateTaskStatus(
-		taskId: string,
-		newStatus: TaskStatus,
-		tag?: string
-	): Promise<UpdateStatusResult>;
-
 	/**
 	 * Delete a task by ID
 	 * @param taskId - ID of the task to delete
@@ -214,11 +191,6 @@ export abstract class BaseStorage implements IStorage {
 		updates: Partial<Task>,
 		tag?: string
 	): Promise<void>;
-	abstract updateTaskStatus(
-		taskId: string,
-		newStatus: TaskStatus,
-		tag?: string
-	): Promise<UpdateStatusResult>;
 	abstract deleteTask(taskId: string, tag?: string): Promise<void>;
 	abstract exists(tag?: string): Promise<boolean>;
 	abstract loadMetadata(tag?: string): Promise<TaskMetadata | null>;

packages/tm-core/src/services/task-service.ts

@@ -135,28 +135,15 @@ export class TaskService {
 	}
 
 	/**
-	 * Get a single task by ID - delegates to storage layer
+	 * Get a single task by ID
 	 */
 	async getTask(taskId: string, tag?: string): Promise<Task | null> {
-		// Use provided tag or get active tag
-		const activeTag = tag || this.getActiveTag();
+		const result = await this.getTaskList({
+			tag,
+			includeSubtasks: true
+		});
 
-		try {
-			// Delegate to storage layer which handles the specific logic for tasks vs subtasks
-			return await this.storage.loadTask(String(taskId), activeTag);
-		} catch (error) {
-			throw new TaskMasterError(
-				`Failed to get task ${taskId}`,
-				ERROR_CODES.STORAGE_ERROR,
-				{
-					operation: 'getTask',
-					resource: 'task',
-					taskId: String(taskId),
-					tag: activeTag
-				},
-				error as Error
-			);
-		}
+		return result.tasks.find((t) => t.id === taskId) || null;
 	}
 
 	/**
@@ -459,7 +446,7 @@ export class TaskService {
 	}
 
 	/**
-	 * Update task status - delegates to storage layer which handles storage-specific logic
+	 * Update task status
 	 */
 	async updateTaskStatus(
 		taskId: string | number,
@@ -481,28 +468,49 @@ export class TaskService {
 
 		// Use provided tag or get active tag
 		const activeTag = tag || this.getActiveTag();
+
 		const taskIdStr = String(taskId);
 
-		try {
-			// Delegate to storage layer which handles the specific logic for tasks vs subtasks
-			return await this.storage.updateTaskStatus(
-				taskIdStr,
-				newStatus,
-				activeTag
+		// TODO: For now, assume it's a regular task and just try to update directly
+		// In the future, we can add subtask support if needed
+		if (taskIdStr.includes('.')) {
+			throw new TaskMasterError(
+				'Subtask status updates not yet supported in API storage',
+				ERROR_CODES.NOT_IMPLEMENTED
 			);
+		}
+
+		// Get the current task to get old status (simple, direct approach)
+		let currentTask: Task | null;
+		try {
+			// Try to get the task directly
+			currentTask = await this.storage.loadTask(taskIdStr, activeTag);
 		} catch (error) {
 			throw new TaskMasterError(
-				`Failed to update task status for ${taskIdStr}`,
-				ERROR_CODES.STORAGE_ERROR,
-				{
-					operation: 'updateTaskStatus',
-					resource: 'task',
-					taskId: taskIdStr,
-					newStatus,
-					tag: activeTag
-				},
+				`Failed to load task ${taskIdStr}`,
+				ERROR_CODES.TASK_NOT_FOUND,
+				{ taskId: taskIdStr },
 				error as Error
 			);
 		}
+
+		if (!currentTask) {
+			throw new TaskMasterError(
+				`Task ${taskIdStr} not found`,
+				ERROR_CODES.TASK_NOT_FOUND
+			);
+		}
+
+		const oldStatus = currentTask.status;
+
+		// Simple, direct update - just change the status
+		await this.storage.updateTask(taskIdStr, { status: newStatus }, activeTag);
+
+		return {
+			success: true,
+			oldStatus,
+			newStatus,
+			taskId: taskIdStr
+		};
 	}
 }

packages/tm-core/src/storage/api-storage.ts

@@ -5,15 +5,9 @@
 
 import type {
 	IStorage,
-	StorageStats,
-	UpdateStatusResult
+	StorageStats
 } from '../interfaces/storage.interface.js';
-import type {
-	Task,
-	TaskMetadata,
-	TaskTag,
-	TaskStatus
-} from '../types/index.js';
+import type { Task, TaskMetadata, TaskTag } from '../types/index.js';
 import { ERROR_CODES, TaskMasterError } from '../errors/task-master-error.js';
 import { TaskRepository } from '../repositories/task-repository.interface.js';
 import { SupabaseTaskRepository } from '../repositories/supabase-task-repository.js';
@@ -491,62 +485,6 @@ export class ApiStorage implements IStorage {
 		}
 	}
 
-	/**
-	 * Update task or subtask status by ID - for API storage
-	 */
-	async updateTaskStatus(
-		taskId: string,
-		newStatus: TaskStatus,
-		tag?: string
-	): Promise<UpdateStatusResult> {
-		await this.ensureInitialized();
-
-		try {
-			const existingTask = await this.retryOperation(() =>
-				this.repository.getTask(this.projectId, taskId)
-			);
-
-			if (!existingTask) {
-				throw new Error(`Task ${taskId} not found`);
-			}
-
-			const oldStatus = existingTask.status;
-			if (oldStatus === newStatus) {
-				return {
-					success: true,
-					oldStatus,
-					newStatus,
-					taskId
-				};
-			}
-
-			// Update the task/subtask status
-			await this.retryOperation(() =>
-				this.repository.updateTask(this.projectId, taskId, {
-					status: newStatus,
-					updatedAt: new Date().toISOString()
-				})
-			);
-
-			// Note: Parent status auto-adjustment is handled by the backend API service
-			// which has its own business logic for managing task relationships
-
-			return {
-				success: true,
-				oldStatus,
-				newStatus,
-				taskId
-			};
-		} catch (error) {
-			throw new TaskMasterError(
-				'Failed to update task status via API',
-				ERROR_CODES.STORAGE_ERROR,
-				{ operation: 'updateTaskStatus', taskId, newStatus, tag },
-				error as Error
-			);
-		}
-	}
-
 	/**
 	 * Get all available tags
 	 */

packages/tm-core/src/storage/file-storage/file-storage.ts

@@ -2,11 +2,10 @@
  * @fileoverview Refactored file-based storage implementation for Task Master
  */
 
-import type { Task, TaskMetadata, TaskStatus } from '../../types/index.js';
+import type { Task, TaskMetadata } from '../../types/index.js';
 import type {
 	IStorage,
-	StorageStats,
-	UpdateStatusResult
+	StorageStats
 } from '../../interfaces/storage.interface.js';
 import { FormatHandler } from './format-handler.js';
 import { FileOperations } from './file-operations.js';
@@ -105,65 +104,9 @@ export class FileStorage implements IStorage {
 
 	/**
 	 * Load a single task by ID from the tasks.json file
-	 * Handles both regular tasks and subtasks (with dotted notation like "1.2")
 	 */
 	async loadTask(taskId: string, tag?: string): Promise<Task | null> {
 		const tasks = await this.loadTasks(tag);
-
-		// Check if this is a subtask (contains a dot)
-		if (taskId.includes('.')) {
-			const [parentId, subtaskId] = taskId.split('.');
-			const parentTask = tasks.find((t) => String(t.id) === parentId);
-
-			if (!parentTask || !parentTask.subtasks) {
-				return null;
-			}
-
-			const subtask = parentTask.subtasks.find(
-				(st) => String(st.id) === subtaskId
-			);
-			if (!subtask) {
-				return null;
-			}
-
-			const toFullSubId = (maybeDotId: string | number): string => {
-				const depId = String(maybeDotId);
-				return depId.includes('.') ? depId : `${parentTask.id}.${depId}`;
-			};
-			const resolvedDependencies =
-				subtask.dependencies?.map((dep) => toFullSubId(dep)) ?? [];
-
-			// Return a Task-like object for the subtask with the full dotted ID
-			// Following the same pattern as findTaskById in utils.js
-			const subtaskResult = {
-				...subtask,
-				id: taskId, // Use the full dotted ID
-				title: subtask.title || `Subtask ${subtaskId}`,
-				description: subtask.description || '',
-				status: subtask.status || 'pending',
-				priority: subtask.priority || parentTask.priority || 'medium',
-				dependencies: resolvedDependencies,
-				details: subtask.details || '',
-				testStrategy: subtask.testStrategy || '',
-				subtasks: [],
-				tags: parentTask.tags || [],
-				assignee: subtask.assignee || parentTask.assignee,
-				complexity: subtask.complexity || parentTask.complexity,
-				createdAt: subtask.createdAt || parentTask.createdAt,
-				updatedAt: subtask.updatedAt || parentTask.updatedAt,
-				// Add reference to parent task for context (like utils.js does)
-				parentTask: {
-					id: parentTask.id,
-					title: parentTask.title,
-					status: parentTask.status
-				},
-				isSubtask: true
-			};
-
-			return subtaskResult;
-		}
-
-		// Handle regular task lookup
 		return tasks.find((task) => String(task.id) === String(taskId)) || null;
 	}
 
@@ -338,156 +281,6 @@ export class FileStorage implements IStorage {
 		await this.saveTasks(tasks, tag);
 	}
 
-	/**
-	 * Update task or subtask status by ID - handles file storage logic with parent/subtask relationships
-	 */
-	async updateTaskStatus(
-		taskId: string,
-		newStatus: TaskStatus,
-		tag?: string
-	): Promise<UpdateStatusResult> {
-		const tasks = await this.loadTasks(tag);
-
-		// Check if this is a subtask (contains a dot)
-		if (taskId.includes('.')) {
-			return this.updateSubtaskStatusInFile(tasks, taskId, newStatus, tag);
-		}
-
-		// Handle regular task update
-		const taskIndex = tasks.findIndex((t) => String(t.id) === String(taskId));
-
-		if (taskIndex === -1) {
-			throw new Error(`Task ${taskId} not found`);
-		}
-
-		const oldStatus = tasks[taskIndex].status;
-		if (oldStatus === newStatus) {
-			return {
-				success: true,
-				oldStatus,
-				newStatus,
-				taskId: String(taskId)
-			};
-		}
-
-		tasks[taskIndex] = {
-			...tasks[taskIndex],
-			status: newStatus,
-			updatedAt: new Date().toISOString()
-		};
-
-		await this.saveTasks(tasks, tag);
-
-		return {
-			success: true,
-			oldStatus,
-			newStatus,
-			taskId: String(taskId)
-		};
-	}
-
-	/**
-	 * Update subtask status within file storage - handles parent status auto-adjustment
-	 */
-	private async updateSubtaskStatusInFile(
-		tasks: Task[],
-		subtaskId: string,
-		newStatus: TaskStatus,
-		tag?: string
-	): Promise<UpdateStatusResult> {
-		// Parse the subtask ID to get parent ID and subtask ID
-		const parts = subtaskId.split('.');
-		if (parts.length !== 2) {
-			throw new Error(
-				`Invalid subtask ID format: ${subtaskId}. Expected format: parentId.subtaskId`
-			);
-		}
-
-		const [parentId, subIdRaw] = parts;
-		const subId = subIdRaw.trim();
-		if (!/^\d+$/.test(subId)) {
-			throw new Error(
-				`Invalid subtask ID: ${subId}. Subtask ID must be a positive integer.`
-			);
-		}
-		const subtaskNumericId = Number(subId);
-
-		// Find the parent task
-		const parentTaskIndex = tasks.findIndex(
-			(t) => String(t.id) === String(parentId)
-		);
-
-		if (parentTaskIndex === -1) {
-			throw new Error(`Parent task ${parentId} not found`);
-		}
-
-		const parentTask = tasks[parentTaskIndex];
-
-		// Find the subtask within the parent task
-		const subtaskIndex = parentTask.subtasks.findIndex(
-			(st) => st.id === subtaskNumericId || String(st.id) === subId
-		);
-
-		if (subtaskIndex === -1) {
-			throw new Error(
-				`Subtask ${subtaskId} not found in parent task ${parentId}`
-			);
-		}
-
-		const oldStatus = parentTask.subtasks[subtaskIndex].status || 'pending';
-		if (oldStatus === newStatus) {
-			return {
-				success: true,
-				oldStatus,
-				newStatus,
-				taskId: subtaskId
-			};
-		}
-
-		const now = new Date().toISOString();
-
-		// Update the subtask status
-		parentTask.subtasks[subtaskIndex] = {
-			...parentTask.subtasks[subtaskIndex],
-			status: newStatus,
-			updatedAt: now
-		};
-
-		// Auto-adjust parent status based on subtask statuses
-		const subs = parentTask.subtasks;
-		let parentNewStatus = parentTask.status;
-		if (subs.length > 0) {
-			const norm = (s: any) => s.status || 'pending';
-			const isDoneLike = (s: any) => {
-				const st = norm(s);
-				return st === 'done' || st === 'completed';
-			};
-			const allDone = subs.every(isDoneLike);
-			const anyInProgress = subs.some((s) => norm(s) === 'in-progress');
-			const anyDone = subs.some(isDoneLike);
-			if (allDone) parentNewStatus = 'done';
-			else if (anyInProgress || anyDone) parentNewStatus = 'in-progress';
-		}
-
-		// Always bump updatedAt; update status only if changed
-		tasks[parentTaskIndex] = {
-			...parentTask,
-			...(parentNewStatus !== parentTask.status
-				? { status: parentNewStatus }
-				: {}),
-			updatedAt: now
-		};
-
-		await this.saveTasks(tasks, tag);
-
-		return {
-			success: true,
-			oldStatus,
-			newStatus,
-			taskId: subtaskId
-		};
-	}
-
 	/**
 	 * Delete a task
 	 */