Potential fix for pull request finding

Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com>
chore: bump version to 0.3.0
2026-03-21 12:53:08 +00:00 · 2026-03-13 15:14:46 -05:00 · 2026-03-13 20:11:58 +00:00
125 changed files with 606 additions and 10141 deletions
--- a/.devcontainer/post-create.sh
+++ b/.devcontainer/post-create.sh
@@ -51,14 +51,6 @@ echo -e "\n🤖 Installing OpenCode CLI..."
 run_command "npm install -g opencode-ai@latest"
 echo "✅ Done"
 echo -e "\n🤖 Installing Junie CLI..."
 run_command "npm install -g @jetbrains/junie-cli@latest"
 echo "✅ Done"
 echo -e "\n🤖 Installing Pi Coding Agent..."
 run_command "npm install -g @mariozechner/pi-coding-agent@latest"
 echo "✅ Done"
 echo -e "\n🤖 Installing Kiro CLI..."
 # https://kiro.dev/docs/cli/
 KIRO_INSTALLER_URL="https://kiro.dev/install.sh"
--- a/.github/ISSUE_TEMPLATE/agent_request.yml
+++ b/.github/ISSUE_TEMPLATE/agent_request.yml
@@ -8,7 +8,7 @@ body:
      value: |
        Thanks for requesting a new agent! Before submitting, please check if the agent is already supported.
-        **Currently supported agents**: Claude Code, Gemini CLI, GitHub Copilot, Cursor, Qwen Code, opencode, Codex CLI, Windsurf, Kilo Code, Auggie CLI, Roo Code, CodeBuddy, Qoder CLI, Kiro CLI, Amp, SHAI, Tabnine CLI, Antigravity, IBM Bob, Mistral Vibe, Kimi Code, Trae, Pi Coding Agent, iFlow CLI
+        **Currently supported agents**: Claude Code, Gemini CLI, GitHub Copilot, Cursor, Qwen Code, opencode, Codex CLI, Windsurf, Kilo Code, Auggie CLI, Roo Code, CodeBuddy, Qoder CLI, Kiro CLI, Amp, SHAI, IBM Bob, Antigravity
  - type: input
    id: agent-name
--- a/.github/ISSUE_TEMPLATE/config.yml
+++ b/.github/ISSUE_TEMPLATE/config.yml
@@ -7,7 +7,7 @@ contact_links:
    url: https://github.com/github/spec-kit/blob/main/README.md
    about: Read the Spec Kit documentation and guides
  - name: 🛠️ Extension Development Guide
-    url: https://github.com/github/spec-kit/blob/main/extensions/EXTENSION-DEVELOPMENT-GUIDE.md
+    url: https://github.com/manfredseee/spec-kit/blob/main/extensions/EXTENSION-DEVELOPMENT-GUIDE.md
    about: Learn how to develop and publish Spec Kit extensions
  - name: 🤝 Contributing Guide
    url: https://github.com/github/spec-kit/blob/main/CONTRIBUTING.md
--- a/.github/ISSUE_TEMPLATE/preset_submission.yml
+++ b/.github/ISSUE_TEMPLATE/preset_submission.yml
@@ -1,169 +0,0 @@
 name: Preset Submission
 description: Submit your preset to the Spec Kit preset catalog
 title: "[Preset]: Add "
 labels: ["preset-submission", "enhancement", "needs-triage"]
 body:
  - type: markdown
    attributes:
      value: |
        Thanks for contributing a preset! This template helps you submit your preset to the community catalog.
        **Before submitting:**
        - Review the [Preset Publishing Guide](https://github.com/github/spec-kit/blob/main/presets/PUBLISHING.md)
        - Ensure your preset has a valid `preset.yml` manifest
        - Create a GitHub release with a version tag (e.g., v1.0.0)
        - Test installation from the release archive: `specify preset add --from <download-url>`
  - type: input
    id: preset-id
    attributes:
      label: Preset ID
      description: Unique preset identifier (lowercase with hyphens only)
      placeholder: "e.g., healthcare-compliance"
    validations:
      required: true
  - type: input
    id: preset-name
    attributes:
      label: Preset Name
      description: Human-readable preset name
      placeholder: "e.g., Healthcare Compliance"
    validations:
      required: true
  - type: input
    id: version
    attributes:
      label: Version
      description: Semantic version number
      placeholder: "e.g., 1.0.0"
    validations:
      required: true
  - type: textarea
    id: description
    attributes:
      label: Description
      description: Brief description of what your preset does (under 200 characters)
      placeholder: Enforces HIPAA-compliant spec workflows with audit templates and compliance checklists
    validations:
      required: true
  - type: input
    id: author
    attributes:
      label: Author
      description: Your name or organization
      placeholder: "e.g., John Doe or Acme Corp"
    validations:
      required: true
  - type: input
    id: repository
    attributes:
      label: Repository URL
      description: GitHub repository URL for your preset
      placeholder: "https://github.com/your-org/spec-kit-your-preset"
    validations:
      required: true
  - type: input
    id: download-url
    attributes:
      label: Download URL
      description: URL to the GitHub release archive for your preset (e.g., https://github.com/your-org/spec-kit-preset-your-preset/archive/refs/tags/v1.0.0.zip)
      placeholder: "https://github.com/your-org/spec-kit-preset-your-preset/archive/refs/tags/v1.0.0.zip"
    validations:
      required: true
  - type: input
    id: license
    attributes:
      label: License
      description: Open source license type
      placeholder: "e.g., MIT, Apache-2.0"
    validations:
      required: true
  - type: input
    id: speckit-version
    attributes:
      label: Required Spec Kit Version
      description: Minimum Spec Kit version required
      placeholder: "e.g., >=0.3.0"
    validations:
      required: true
  - type: textarea
    id: templates-provided
    attributes:
      label: Templates Provided
      description: List the template overrides your preset provides
      placeholder: |
        - spec-template.md — adds compliance section
        - plan-template.md — includes audit checkpoints
        - checklist-template.md — HIPAA compliance checklist
    validations:
      required: true
  - type: textarea
    id: commands-provided
    attributes:
      label: Commands Provided (optional)
      description: List any command overrides your preset provides
      placeholder: |
        - speckit.specify.md — customized for compliance workflows
  - type: textarea
    id: tags
    attributes:
      label: Tags
      description: 2-5 relevant tags (lowercase, separated by commas)
      placeholder: "compliance, healthcare, hipaa, audit"
    validations:
      required: true
  - type: textarea
    id: features
    attributes:
      label: Key Features
      description: List the main features and capabilities of your preset
      placeholder: |
        - HIPAA-compliant spec templates
        - Audit trail checklists
        - Compliance review workflow
    validations:
      required: true
  - type: checkboxes
    id: testing
    attributes:
      label: Testing Checklist
      description: Confirm that your preset has been tested
      options:
        - label: Preset installs successfully via `specify preset add`
          required: true
        - label: Template resolution works correctly after installation
          required: true
        - label: Documentation is complete and accurate
          required: true
        - label: Tested on at least one real project
          required: true
  - type: checkboxes
    id: requirements
    attributes:
      label: Submission Requirements
      description: Verify your preset meets all requirements
      options:
        - label: Valid `preset.yml` manifest included
          required: true
        - label: README.md with description and usage instructions
          required: true
        - label: LICENSE file included
          required: true
        - label: GitHub release created with version tag
          required: true
        - label: Preset ID follows naming conventions (lowercase-with-hyphens)
          required: true
--- a/.github/workflows/release-trigger.yml
+++ b/.github/workflows/release-trigger.yml
@@ -86,10 +86,8 @@ jobs:
          if [ -f "CHANGELOG.md" ]; then
            DATE=$(date +%Y-%m-%d)
-            # Get the previous tag by sorting all version tags numerically
+            # Get the previous tag to compare commits
-            # (git describe --tags only finds tags reachable from HEAD,
+            PREVIOUS_TAG=$(git describe --tags --abbrev=0 2>/dev/null || echo "")
            #  which misses tags on unmerged release branches)
            PREVIOUS_TAG=$(git tag -l 'v*' --sort=-version:refname | head -n 1)
            echo "Generating changelog from commits..."
            if [[ -n "$PREVIOUS_TAG" ]]; then
@@ -106,7 +104,7 @@ jobs:
              echo ""
              echo "## [${{ steps.version.outputs.version }}] - $DATE"
              echo ""
-              echo "### Changes"
+              echo "### Changed"
              echo ""
              echo "$COMMITS"
              echo ""
--- a/.github/workflows/scripts/create-github-release.sh
+++ b/.github/workflows/scripts/create-github-release.sh
@@ -30,8 +30,6 @@ gh release create "$VERSION" \
  .genreleases/spec-kit-template-qwen-ps-"$VERSION".zip \
  .genreleases/spec-kit-template-windsurf-sh-"$VERSION".zip \
  .genreleases/spec-kit-template-windsurf-ps-"$VERSION".zip \
  .genreleases/spec-kit-template-junie-sh-"$VERSION".zip \
  .genreleases/spec-kit-template-junie-ps-"$VERSION".zip \
  .genreleases/spec-kit-template-codex-sh-"$VERSION".zip \
  .genreleases/spec-kit-template-codex-ps-"$VERSION".zip \
  .genreleases/spec-kit-template-kilocode-sh-"$VERSION".zip \
@@ -60,12 +58,6 @@ gh release create "$VERSION" \
  .genreleases/spec-kit-template-vibe-ps-"$VERSION".zip \
  .genreleases/spec-kit-template-kimi-sh-"$VERSION".zip \
  .genreleases/spec-kit-template-kimi-ps-"$VERSION".zip \
  .genreleases/spec-kit-template-trae-sh-"$VERSION".zip \
  .genreleases/spec-kit-template-trae-ps-"$VERSION".zip \
  .genreleases/spec-kit-template-pi-sh-"$VERSION".zip \
  .genreleases/spec-kit-template-pi-ps-"$VERSION".zip \
  .genreleases/spec-kit-template-iflow-sh-"$VERSION".zip \
  .genreleases/spec-kit-template-iflow-ps-"$VERSION".zip \
  .genreleases/spec-kit-template-generic-sh-"$VERSION".zip \
  .genreleases/spec-kit-template-generic-ps-"$VERSION".zip \
  --title "Spec Kit Templates - $VERSION_NO_V" \
--- a/.github/workflows/scripts/create-release-packages.ps1
+++ b/.github/workflows/scripts/create-release-packages.ps1
@@ -14,7 +14,7 @@
 .PARAMETER Agents
    Comma or space separated subset of agents to build (default: all)
-    Valid agents: claude, gemini, copilot, cursor-agent, qwen, opencode, windsurf, junie, codex, kilocode, auggie, roo, codebuddy, amp, kiro-cli, bob, qodercli, shai, tabnine, agy, vibe, kimi, trae, pi, iflow, generic
+    Valid agents: claude, gemini, copilot, cursor-agent, qwen, opencode, windsurf, codex, kilocode, auggie, roo, codebuddy, amp, kiro-cli, bob, qodercli, shai, tabnine, agy, vibe, kimi, generic
 .PARAMETER Scripts
    Comma or space separated subset of script types to build (default: both)
@@ -201,26 +201,20 @@ agent: $basename
    }
 }
-# Create skills in <skills_dir>\<name>\SKILL.md format.
+# Create Kimi Code skills in .kimi/skills/<name>/SKILL.md format.
-# Most agents use hyphenated names (e.g. speckit-plan); Kimi is the
+# Kimi CLI discovers skills as directories containing a SKILL.md file,
-# current dotted-name exception (e.g. speckit.plan).
+# invoked with /skill:<name> (e.g. /skill:speckit.specify).
-#
+function New-KimiSkills {
 # Technical debt note:
 # Keep SKILL.md frontmatter aligned with `install_ai_skills()` and extension
 # overrides (at minimum: name/description/compatibility/metadata.{author,source}).
 function New-Skills {
    param(
        [string]$SkillsDir,
-        [string]$ScriptVariant,
+        [string]$ScriptVariant
        [string]$AgentName,
        [string]$Separator = '-'
    )
    $templates = Get-ChildItem -Path "templates/commands/*.md" -File -ErrorAction SilentlyContinue
    foreach ($template in $templates) {
        $name = [System.IO.Path]::GetFileNameWithoutExtension($template.Name)
-        $skillName = "speckit${Separator}$name"
+        $skillName = "speckit.$name"
        $skillDir = Join-Path $SkillsDir $skillName
        New-Item -ItemType Directory -Force -Path $skillDir | Out-Null
@@ -273,7 +267,7 @@ function New-Skills {
        $body = $outputLines -join "`n"
        $body = $body -replace '\{ARGS\}', '$ARGUMENTS'
-        $body = $body -replace '__AGENT__', $AgentName
+        $body = $body -replace '__AGENT__', 'kimi'
        $body = Rewrite-Paths -Content $body
        # Strip existing frontmatter, keep only body
@@ -289,7 +283,7 @@ function New-Skills {
            if ($inBody) { $templateBody += "$line`n" }
        }
-        $skillContent = "---`nname: `"$skillName`"`ndescription: `"$description`"`ncompatibility: `"Requires spec-kit project structure with .specify/ directory`"`nmetadata:`n  author: `"github-spec-kit`"`n  source: `"templates/commands/$name.md`"`n---`n`n$templateBody"
+        $skillContent = "---`nname: `"$skillName`"`ndescription: `"$description`"`n---`n`n$templateBody"
        Set-Content -Path (Join-Path $skillDir "SKILL.md") -Value $skillContent -NoNewline
    }
 }
@@ -401,14 +395,9 @@ function Build-Variant {
            $cmdDir = Join-Path $baseDir ".windsurf/workflows"
            Generate-Commands -Agent 'windsurf' -Extension 'md' -ArgFormat '$ARGUMENTS' -OutputDir $cmdDir -ScriptVariant $Script
        }
        'junie' {
            $cmdDir = Join-Path $baseDir ".junie/commands"
            Generate-Commands -Agent 'junie' -Extension 'md' -ArgFormat '$ARGUMENTS' -OutputDir $cmdDir -ScriptVariant $Script
        }
        'codex' {
-            $skillsDir = Join-Path $baseDir ".agents/skills"
+            $cmdDir = Join-Path $baseDir ".codex/prompts"
-            New-Item -ItemType Directory -Force -Path $skillsDir | Out-Null
+            Generate-Commands -Agent 'codex' -Extension 'md' -ArgFormat '$ARGUMENTS' -OutputDir $cmdDir -ScriptVariant $Script
            New-Skills -SkillsDir $skillsDir -ScriptVariant $Script -AgentName 'codex' -Separator '-'
        }
        'kilocode' {
            $cmdDir = Join-Path $baseDir ".kilocode/workflows"
@@ -463,20 +452,7 @@ function Build-Variant {
        'kimi' {
            $skillsDir = Join-Path $baseDir ".kimi/skills"
            New-Item -ItemType Directory -Force -Path $skillsDir | Out-Null
-            New-Skills -SkillsDir $skillsDir -ScriptVariant $Script -AgentName 'kimi' -Separator '.'
+            New-KimiSkills -SkillsDir $skillsDir -ScriptVariant $Script
        }
        'trae' {
            $rulesDir = Join-Path $baseDir ".trae/rules"
            New-Item -ItemType Directory -Force -Path $rulesDir | Out-Null
            Generate-Commands -Agent 'trae' -Extension 'md' -ArgFormat '$ARGUMENTS' -OutputDir $rulesDir -ScriptVariant $Script
        }
        'pi' {
            $cmdDir = Join-Path $baseDir ".pi/prompts"
            Generate-Commands -Agent 'pi' -Extension 'md' -ArgFormat '$ARGUMENTS' -OutputDir $cmdDir -ScriptVariant $Script
        }
        'iflow' {
            $cmdDir = Join-Path $baseDir ".iflow/commands"
            Generate-Commands -Agent 'iflow' -Extension 'md' -ArgFormat '$ARGUMENTS' -OutputDir $cmdDir -ScriptVariant $Script
        }
        'generic' {
            $cmdDir = Join-Path $baseDir ".speckit/commands"
@@ -494,7 +470,7 @@ function Build-Variant {
 }
 # Define all agents and scripts
-$AllAgents = @('claude', 'gemini', 'copilot', 'cursor-agent', 'qwen', 'opencode', 'windsurf', 'junie', 'codex', 'kilocode', 'auggie', 'roo', 'codebuddy', 'amp', 'kiro-cli', 'bob', 'qodercli', 'shai', 'tabnine', 'agy', 'vibe', 'kimi', 'trae', 'pi', 'iflow', 'generic')
+$AllAgents = @('claude', 'gemini', 'copilot', 'cursor-agent', 'qwen', 'opencode', 'windsurf', 'codex', 'kilocode', 'auggie', 'roo', 'codebuddy', 'amp', 'kiro-cli', 'bob', 'qodercli', 'shai', 'tabnine', 'agy', 'vibe', 'kimi', 'generic')
 $AllScripts = @('sh', 'ps')
 function Normalize-List {
--- a/.github/workflows/scripts/create-release-packages.sh
+++ b/.github/workflows/scripts/create-release-packages.sh
@@ -6,7 +6,7 @@ set -euo pipefail
 # Usage: .github/workflows/scripts/create-release-packages.sh <version>
 #   Version argument should include leading 'v'.
 #   Optionally set AGENTS and/or SCRIPTS env vars to limit what gets built.
-#     AGENTS  : space or comma separated subset of: claude gemini copilot cursor-agent qwen opencode windsurf junie codex kilocode auggie roo codebuddy amp shai tabnine kiro-cli agy bob vibe qodercli kimi trae pi iflow generic (default: all)
+#     AGENTS  : space or comma separated subset of: claude gemini copilot cursor-agent qwen opencode windsurf codex kilocode auggie roo codebuddy amp shai tabnine kiro-cli agy bob vibe qodercli kimi generic (default: all)
 #     SCRIPTS : space or comma separated subset of: sh ps (default: both)
 #   Examples:
 #     AGENTS=claude SCRIPTS=sh $0 v0.2.0
@@ -26,27 +26,9 @@ fi
 echo "Building release packages for $NEW_VERSION"
 # Create and use .genreleases directory for all build artifacts
-# Override via GENRELEASES_DIR env var (e.g. for tests writing to a temp dir)
+GENRELEASES_DIR=".genreleases"
 GENRELEASES_DIR="${GENRELEASES_DIR:-.genreleases}"
 # Guard against unsafe GENRELEASES_DIR values before cleaning
 if [[ -z "$GENRELEASES_DIR" ]]; then
  echo "GENRELEASES_DIR must not be empty" >&2
  exit 1
 fi
 case "$GENRELEASES_DIR" in
  '/'|'.'|'..')
    echo "Refusing to use unsafe GENRELEASES_DIR value: $GENRELEASES_DIR" >&2
    exit 1
    ;;
 esac
 if [[ "$GENRELEASES_DIR" == *".."* ]]; then
  echo "Refusing to use GENRELEASES_DIR containing '..' path segments: $GENRELEASES_DIR" >&2
  exit 1
 fi
 mkdir -p "$GENRELEASES_DIR"
-rm -rf "${GENRELEASES_DIR%/}/"* || true
+rm -rf "$GENRELEASES_DIR"/* || true
 rewrite_paths() {
  sed -E \
@@ -139,24 +121,18 @@ EOF
  done
 }
-# Create skills in <skills_dir>/<name>/SKILL.md format.
+# Create Kimi Code skills in .kimi/skills/<name>/SKILL.md format.
-# Most agents use hyphenated names (e.g. speckit-plan); Kimi is the
+# Kimi CLI discovers skills as directories containing a SKILL.md file,
-# current dotted-name exception (e.g. speckit.plan).
+# invoked with /skill:<name> (e.g. /skill:speckit.specify).
-#
+create_kimi_skills() {
 # Technical debt note:
 # Keep SKILL.md frontmatter aligned with `install_ai_skills()` and extension
 # overrides (at minimum: name/description/compatibility/metadata.{author,source}).
 create_skills() {
  local skills_dir="$1"
  local script_variant="$2"
  local agent_name="$3"
  local separator="${4:-"-"}"
  for template in templates/commands/*.md; do
    [[ -f "$template" ]] || continue
    local name
    name=$(basename "$template" .md)
-    local skill_name="speckit${separator}${name}"
+    local skill_name="speckit.${name}"
    local skill_dir="${skills_dir}/${skill_name}"
    mkdir -p "$skill_dir"
@@ -199,9 +175,9 @@ create_skills() {
      in_frontmatter && skip_scripts && /^[[:space:]]/ { next }
      { print }
    ')
-    body=$(printf '%s\n' "$body" | sed 's/{ARGS}/\$ARGUMENTS/g' | sed "s/__AGENT__/$agent_name/g" | rewrite_paths)
+    body=$(printf '%s\n' "$body" | sed 's/{ARGS}/\$ARGUMENTS/g' | sed 's/__AGENT__/kimi/g' | rewrite_paths)
-    # Strip existing frontmatter and prepend skills frontmatter.
+    # Strip existing frontmatter and prepend Kimi frontmatter
    local template_body
    template_body=$(printf '%s\n' "$body" | awk '/^---/{p++; if(p==2){found=1; next}} found')
@@ -209,10 +185,6 @@ create_skills() {
      printf -- '---\n'
      printf 'name: "%s"\n' "$skill_name"
      printf 'description: "%s"\n' "$description"
      printf 'compatibility: "%s"\n' "Requires spec-kit project structure with .specify/ directory"
      printf -- 'metadata:\n'
      printf '  author: "%s"\n' "github-spec-kit"
      printf '  source: "%s"\n' "templates/commands/${name}.md"
      printf -- '---\n\n'
      printf '%s\n' "$template_body"
    } > "$skill_dir/SKILL.md"
@@ -246,7 +218,7 @@ build_variant() {
    esac
  fi
-  [[ -d templates ]] && { mkdir -p "$SPEC_DIR/templates"; find templates -type f -not -path "templates/commands/*" -not -name "vscode-settings.json" | while IFS= read -r f; do d="$SPEC_DIR/$(dirname "$f")"; mkdir -p "$d"; cp "$f" "$d/"; done; echo "Copied templates -> .specify/templates"; }
+  [[ -d templates ]] && { mkdir -p "$SPEC_DIR/templates"; find templates -type f -not -path "templates/commands/*" -not -name "vscode-settings.json" -exec cp --parents {} "$SPEC_DIR"/ \; ; echo "Copied templates -> .specify/templates"; }
  case $agent in
    claude)
@@ -276,12 +248,9 @@ build_variant() {
    windsurf)
      mkdir -p "$base_dir/.windsurf/workflows"
      generate_commands windsurf md "\$ARGUMENTS" "$base_dir/.windsurf/workflows" "$script" ;;
    junie)
      mkdir -p "$base_dir/.junie/commands"
      generate_commands junie md "\$ARGUMENTS" "$base_dir/.junie/commands" "$script" ;;
    codex)
-      mkdir -p "$base_dir/.agents/skills"
+      mkdir -p "$base_dir/.codex/prompts"
-      create_skills "$base_dir/.agents/skills" "$script" "codex" "-" ;;
+      generate_commands codex md "\$ARGUMENTS" "$base_dir/.codex/prompts" "$script" ;;
    kilocode)
      mkdir -p "$base_dir/.kilocode/workflows"
      generate_commands kilocode md "\$ARGUMENTS" "$base_dir/.kilocode/workflows" "$script" ;;
@@ -321,16 +290,7 @@ build_variant() {
      generate_commands vibe md "\$ARGUMENTS" "$base_dir/.vibe/prompts" "$script" ;;
    kimi)
      mkdir -p "$base_dir/.kimi/skills"
-      create_skills "$base_dir/.kimi/skills" "$script" "kimi" "." ;;
+      create_kimi_skills "$base_dir/.kimi/skills" "$script" ;;
    trae)
      mkdir -p "$base_dir/.trae/rules"
      generate_commands trae md "\$ARGUMENTS" "$base_dir/.trae/rules" "$script" ;;
    pi)
      mkdir -p "$base_dir/.pi/prompts"
      generate_commands pi md "\$ARGUMENTS" "$base_dir/.pi/prompts" "$script" ;;
    iflow)
      mkdir -p "$base_dir/.iflow/commands"
      generate_commands iflow md "\$ARGUMENTS" "$base_dir/.iflow/commands" "$script" ;;
    generic)
      mkdir -p "$base_dir/.speckit/commands"
      generate_commands generic md "\$ARGUMENTS" "$base_dir/.speckit/commands" "$script" ;;
@@ -340,38 +300,37 @@ build_variant() {
 }
 # Determine agent list
-ALL_AGENTS=(claude gemini copilot cursor-agent qwen opencode windsurf junie codex kilocode auggie roo codebuddy amp shai tabnine kiro-cli agy bob vibe qodercli kimi trae pi iflow generic)
+ALL_AGENTS=(claude gemini copilot cursor-agent qwen opencode windsurf codex kilocode auggie roo codebuddy amp shai tabnine kiro-cli agy bob vibe qodercli kimi generic)
 ALL_SCRIPTS=(sh ps)
 norm_list() {
  tr ',\n' '  ' | awk '{for(i=1;i<=NF;i++){if(!seen[$i]++){printf((out?"\n":"") $i);out=1}}}END{printf("\n")}'
 }
 validate_subset() {
-  local type=$1; shift
+  local type=$1; shift; local -n allowed=$1; shift; local items=("$@")
  local allowed_str="$1"; shift
  local invalid=0
-  for it in "$@"; do
+  for it in "${items[@]}"; do
    local found=0
-    for a in $allowed_str; do
+    for a in "${allowed[@]}"; do [[ $it == "$a" ]] && { found=1; break; }; done
      if [[ "$it" == "$a" ]]; then found=1; break; fi
    done
    if [[ $found -eq 0 ]]; then
-      echo "Error: unknown $type '$it' (allowed: $allowed_str)" >&2
+      echo "Error: unknown $type '$it' (allowed: ${allowed[*]})" >&2
      invalid=1
    fi
  done
  return $invalid
 }
 read_list() { tr ',\n' '  ' | awk '{for(i=1;i<=NF;i++){if(!seen[$i]++){printf((out?" ":"") $i);out=1}}}END{printf("\n")}'; }
 if [[ -n ${AGENTS:-} ]]; then
-  read -ra AGENT_LIST <<< "$(printf '%s' "$AGENTS" | read_list)"
+  mapfile -t AGENT_LIST < <(printf '%s' "$AGENTS" | norm_list)
-  validate_subset agent "${ALL_AGENTS[*]}" "${AGENT_LIST[@]}" || exit 1
+  validate_subset agent ALL_AGENTS "${AGENT_LIST[@]}" || exit 1
 else
  AGENT_LIST=("${ALL_AGENTS[@]}")
 fi
 if [[ -n ${SCRIPTS:-} ]]; then
-  read -ra SCRIPT_LIST <<< "$(printf '%s' "$SCRIPTS" | read_list)"
+  mapfile -t SCRIPT_LIST < <(printf '%s' "$SCRIPTS" | norm_list)
-  validate_subset script "${ALL_SCRIPTS[*]}" "${SCRIPT_LIST[@]}" || exit 1
+  validate_subset script ALL_SCRIPTS "${SCRIPT_LIST[@]}" || exit 1
 else
  SCRIPT_LIST=("${ALL_SCRIPTS[@]}")
 fi
--- a/.github/workflows/stale.yml
+++ b/.github/workflows/stale.yml
@@ -39,4 +39,4 @@ jobs:
          any-of-labels: ''
          # Operations per run (helps avoid rate limits)
-          operations-per-run: 250
+          operations-per-run: 100
--- a/AGENTS.md
+++ b/AGENTS.md
@@ -33,12 +33,11 @@ Specify supports multiple AI agents by generating agent-specific command files a
 | **Cursor**                 | `.cursor/commands/`    | Markdown | `cursor-agent`  | Cursor CLI                  |
 | **Qwen Code**              | `.qwen/commands/`      | Markdown | `qwen`          | Alibaba's Qwen Code CLI     |
 | **opencode**               | `.opencode/command/`   | Markdown | `opencode`      | opencode CLI                |
-| **Codex CLI**              | `.agents/skills/`      | Markdown | `codex`         | Codex CLI (skills)          |
+| **Codex CLI**              | `.codex/commands/`     | Markdown | `codex`         | Codex CLI                   |
 | **Windsurf**               | `.windsurf/workflows/` | Markdown | N/A (IDE-based) | Windsurf IDE workflows      |
-| **Junie**                  | `.junie/commands/`     | Markdown | `junie`         | Junie by JetBrains          |
+| **Kilo Code**              | `.kilocode/rules/`     | Markdown | N/A (IDE-based) | Kilo Code IDE               |
-| **Kilo Code**              | `.kilocode/workflows/` | Markdown | N/A (IDE-based) | Kilo Code IDE               |
+| **Auggie CLI**             | `.augment/rules/`      | Markdown | `auggie`        | Auggie CLI                  |
-| **Auggie CLI**             | `.augment/commands/`   | Markdown | `auggie`        | Auggie CLI                  |
+| **Roo Code**               | `.roo/rules/`          | Markdown | N/A (IDE-based) | Roo Code IDE                |
 | **Roo Code**               | `.roo/commands/`       | Markdown | N/A (IDE-based) | Roo Code IDE                |
 | **CodeBuddy CLI**          | `.codebuddy/commands/` | Markdown | `codebuddy`     | CodeBuddy CLI               |
 | **Qoder CLI**              | `.qoder/commands/`     | Markdown | `qodercli`      | Qoder CLI                   |
 | **Kiro CLI**               | `.kiro/prompts/`       | Markdown | `kiro-cli`      | Kiro CLI                    |
@@ -46,10 +45,7 @@ Specify supports multiple AI agents by generating agent-specific command files a
 | **SHAI**                   | `.shai/commands/`      | Markdown | `shai`          | SHAI CLI                    |
 | **Tabnine CLI**            | `.tabnine/agent/commands/` | TOML | `tabnine`       | Tabnine CLI                 |
 | **Kimi Code**              | `.kimi/skills/`        | Markdown | `kimi`          | Kimi Code CLI (Moonshot AI) |
 | **Pi Coding Agent**        | `.pi/prompts/`         | Markdown | `pi`            | Pi terminal coding agent    |
 | **iFlow CLI**              | `.iflow/commands/`     | Markdown | `iflow`         | iFlow CLI (iflow-ai)        |
 | **IBM Bob**                | `.bob/commands/`       | Markdown | N/A (IDE-based) | IBM Bob IDE                 |
 | **Trae**                   | `.trae/rules/`         | Markdown | N/A (IDE-based) | Trae IDE                    |
 | **Generic**                | User-specified via `--ai-commands-dir` | Markdown | N/A | Bring your own agent        |
 ### Step-by-Step Integration Guide
@@ -88,7 +84,7 @@ This eliminates the need for special-case mappings throughout the codebase.
 - `folder`: Directory where agent-specific files are stored (relative to project root)
 - `commands_subdir`: Subdirectory name within the agent folder where command/prompt files are stored (default: `"commands"`)
  - Most agents use `"commands"` (e.g., `.claude/commands/`)
-  - Some agents use alternative names: `"agents"` (copilot), `"workflows"` (windsurf, kilocode), `"prompts"` (codex, kiro-cli, pi), `"command"` (opencode - singular)
+  - Some agents use alternative names: `"agents"` (copilot), `"workflows"` (windsurf, kilocode), `"prompts"` (codex, kiro-cli), `"command"` (opencode - singular)
  - This field enables `--ai-skills` to locate command templates correctly for skill generation
 - `install_url`: Installation documentation URL (set to `None` for IDE-based agents)
 - `requires_cli`: Whether the agent requires a CLI tool check during initialization
@@ -319,7 +315,6 @@ Require a command-line tool to be installed:
 - **Cursor**: `cursor-agent` CLI
 - **Qwen Code**: `qwen` CLI
 - **opencode**: `opencode` CLI
 - **Junie**: `junie` CLI
 - **Kiro CLI**: `kiro-cli` CLI
 - **CodeBuddy CLI**: `codebuddy` CLI
 - **Qoder CLI**: `qodercli` CLI
@@ -327,7 +322,6 @@ Require a command-line tool to be installed:
 - **SHAI**: `shai` CLI
 - **Tabnine CLI**: `tabnine` CLI
 - **Kimi Code**: `kimi` CLI
 - **Pi Coding Agent**: `pi` CLI
 ### IDE-Based Agents
@@ -341,7 +335,7 @@ Work within integrated development environments:
 ### Markdown Format
-Used by: Claude, Cursor, opencode, Windsurf, Junie, Kiro CLI, Amp, SHAI, IBM Bob, Kimi Code, Qwen, Pi
+Used by: Claude, Cursor, opencode, Windsurf, Kiro CLI, Amp, SHAI, IBM Bob, Kimi Code, Qwen
 **Standard format:**
@@ -379,11 +373,6 @@ Command content with {SCRIPT} and {{args}} placeholders.
 ## Directory Conventions
 - **CLI agents**: Usually `.<agent-name>/commands/`
 - **Skills-based exceptions**:
  - Codex: `.agents/skills/` (skills, invoked as `$speckit-<command>`)
 - **Prompt-based exceptions**:
  - Kiro CLI: `.kiro/prompts/`
  - Pi: `.pi/prompts/`
 - **IDE agents**: Follow IDE-specific patterns:
  - Copilot: `.github/agents/`
  - Cursor: `.cursor/commands/`
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -1,61 +1,56 @@
 # Changelog
-## [0.3.2] - 2026-03-19
+<!-- markdownlint-disable MD024 -->
-### Changes
+Recent changes to the Specify CLI and templates are documented here.
- chore: bump version to 0.3.2
+The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
- Add conduct extension to community catalog (#1908)
+and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 - feat(extensions): add verify-tasks extension to community catalog (#1871)
 - feat(presets): add enable/disable toggle and update semantics (#1891)
 - feat: add iFlow CLI support (#1875)
 - feat(commands): wire before/after hook events into specify and plan templates (#1886)
 - docs(catalog): add speckit-utils to community catalog (#1896)
 - docs: Add Extensions & Presets section to README (#1898)
 - chore: update DocGuard extension to v0.9.11 (#1899)
 - Update cognitive-squad catalog entry — Triadic Model, full lifecycle (#1884)
 - feat: register spec-kit-iterate extension (#1887)
 - fix(scripts): add explicit positional binding to PowerShell create-new-feature params (#1885)
 - fix(scripts): encode residual JSON control chars as \uXXXX instead of stripping (#1872)
 - chore: update DocGuard extension to v0.9.10 (#1890)
 - Feature/spec kit add pi coding agent pullrequest (#1853)
 - feat: register spec-kit-learn extension (#1883)
 ## [0.3.1] - 2026-03-17
 ### Changed
 - chore: bump version to 0.3.1
 - docs: add greenfield Spring Boot pirate-speak preset demo to README (#1878)
 - fix(ai-skills): exclude non-speckit copilot agent markdown from skills (#1867)
 - feat: add Trae IDE support as a new agent (#1817)
 - feat(cli): polite deep merge for settings.json and support JSONC (#1874)
 - feat(extensions,presets): add priority-based resolution ordering (#1855)
 - fix(scripts): suppress stdout from git fetch in create-new-feature.sh (#1876)
 - fix(scripts): harden bash scripts — escape, compat, and error handling (#1869)
 - Add cognitive-squad to community extension catalog (#1870)
 - docs: add Go / React brownfield walkthrough to community walkthroughs (#1868)
 - chore: update DocGuard extension to v0.9.8 (#1859)
 - Feature: add specify status command (#1837)
 - fix(extensions): show extension ID in list output (#1843)
 - feat(extensions): add Archive and Reconcile extensions to community catalog (#1844)
 - feat: Add DocGuard CDD enforcement extension to community catalog (#1838)
 ## [0.3.0] - 2026-03-13
 ### Changed
- chore: bump version to 0.3.0
+- No changes have been documented for this release yet.
- feat(presets): Pluggable preset system with catalog, resolver, and skills propagation (#1787)
+
- fix: match 'Last updated' timestamp with or without bold markers (#1836)
+<!-- Entries for 0.2.x and earlier releases are documented in their respective sections below. -->
- Add specify doctor command for project health diagnostics (#1828)
+- make c ignores consistent with c++ (#1747)
- fix: harden bash scripts against shell injection and improve robustness (#1809)
+- chore: bump version to 0.1.13 (#1746)
- fix: clean up command templates (specify, analyze) (#1810)
+- feat: add kiro-cli and AGENT_CONFIG consistency coverage (#1690)
- fix: migrate Qwen Code CLI from TOML to Markdown format (#1589) (#1730)
+- feat: add verify extension to community catalog (#1726)
- fix(cli): deprecate explicit command support for agy (#1798) (#1808)
+- Add Retrospective Extension to community catalog README table (#1741)
- Add /selftest.extension core extension to test other extensions (#1758)
+- fix(scripts): add empty description validation and branch checkout error handling (#1559)
- feat(extensions): Quality of life improvements for RFC-aligned catalog integration (#1776)
+- fix: correct Copilot extension command registration (#1724)
- Add Java brownfield walkthrough to community walkthroughs (#1820)
+- fix(implement): remove Makefile from C ignore patterns (#1558)
 - Add sync extension to community catalog (#1728)
 - fix(checklist): clarify file handling behavior for append vs create (#1556)
 - fix(clarify): correct conflicting question limit from 10 to 5 (#1557)
 - chore: bump version to 0.1.12 (#1737)
 - fix: use RELEASE_PAT so tag push triggers release workflow (#1736)
 - fix: release-trigger uses release branch + PR instead of direct push to main (#1733)
 - fix: Split release process to sync pyproject.toml version with git tags (#1732)
 ## [Unreleased]
 ### Added
 - feat(presets): Pluggable preset system with preset catalog and template resolver
 - Preset manifest (`preset.yml`) with validation for artifact, command, and script types
 - `PresetManifest`, `PresetRegistry`, `PresetManager`, `PresetCatalog`, `PresetResolver` classes in `src/specify_cli/presets.py`
 - CLI commands: `specify preset search`, `specify preset add`, `specify preset list`, `specify preset remove`, `specify preset resolve`, `specify preset info`
 - CLI commands: `specify preset catalog list`, `specify preset catalog add`, `specify preset catalog remove` for multi-catalog management
 - `PresetCatalogEntry` dataclass and multi-catalog support mirroring the extension catalog system
 - `--preset` option for `specify init` to install presets during initialization
 - Priority-based preset resolution: presets with lower priority number win (`--priority` flag)
 - `resolve_template()` / `Resolve-Template` helpers in bash and PowerShell common scripts
 - Template resolution priority stack: overrides → presets → extensions → core
 - Preset catalog files (`presets/catalog.json`, `presets/catalog.community.json`)
 - Preset scaffold directory (`presets/scaffold/`)
 - Scripts updated to use template resolution instead of hardcoded paths
 - feat(presets): Preset command overrides now propagate to agent skills when `--ai-skills` was used during init
 - feat: `specify init` persists CLI options to `.specify/init-options.json` for downstream operations
 - feat(extensions): support `.extensionignore` to exclude files/folders during `specify extension add` (#1781)
 ## [0.2.1] - 2026-03-11
@@ -282,3 +277,28 @@
 - Add pytest and Python linting (ruff) to CI (#1637)
 - feat: add pull request template for better contribution guidelines (#1634)
 ## [0.0.99] - 2026-02-19
 - Feat/ai skills (#1632)
 ## [0.0.98] - 2026-02-19
 - chore(deps): bump actions/stale from 9 to 10 (#1623)
 - feat: add dependabot configuration for pip and GitHub Actions updates (#1622)
 ## [0.0.97] - 2026-02-18
 - Remove Maintainers section from README.md (#1618)
 ## [0.0.96] - 2026-02-17
 - fix: typo in plan-template.md (#1446)
 ## [0.0.95] - 2026-02-12
 - Feat: add a new agent: Google Anti Gravity (#1220)
 ## [0.0.94] - 2026-02-11
 - Add stale workflow for 180-day inactive issues and PRs (#1594)
--- a/README.md
+++ b/README.md
@@ -25,7 +25,6 @@
 - [🚶 Community Walkthroughs](#-community-walkthroughs)
 - [🤖 Supported AI Agents](#-supported-ai-agents)
 - [🔧 Specify CLI Reference](#-specify-cli-reference)
 - [🧩 Making Spec Kit Your Own: Extensions & Presets](#-making-spec-kit-your-own-extensions--presets)
 - [📚 Core Philosophy](#-core-philosophy)
 - [🌟 Development Phases](#-development-phases)
 - [🎯 Experimental Goals](#-experimental-goals)
@@ -49,13 +48,9 @@ Choose your preferred installation method:
 #### Option 1: Persistent Installation (Recommended)
-Install once and use everywhere. Pin a specific release tag for stability (check [Releases](https://github.com/github/spec-kit/releases) for the latest):
+Install once and use everywhere:
 ```bash
 # Install a specific stable release (recommended — replace vX.Y.Z with the latest tag)
 uv tool install specify-cli --from git+https://github.com/github/spec-kit.git@vX.Y.Z
 # Or install latest from main (may include unreleased changes)
 uv tool install specify-cli --from git+https://github.com/github/spec-kit.git
 ```
@@ -77,7 +72,7 @@ specify check
 To upgrade Specify, see the [Upgrade Guide](./docs/upgrade.md) for detailed instructions. Quick upgrade:
 ```bash
-uv tool install specify-cli --force --from git+https://github.com/github/spec-kit.git@vX.Y.Z
+uv tool install specify-cli --force --from git+https://github.com/github/spec-kit.git
 ```
 #### Option 2: One-time Usage
@@ -85,13 +80,13 @@ uv tool install specify-cli --force --from git+https://github.com/github/spec-ki
 Run directly without installing:
 ```bash
-# Create new project (pinned to a stable release — replace vX.Y.Z with the latest tag)
+# Create new project
-uvx --from git+https://github.com/github/spec-kit.git@vX.Y.Z specify init <PROJECT_NAME>
+uvx --from git+https://github.com/github/spec-kit.git specify init <PROJECT_NAME>
 # Or initialize in existing project
-uvx --from git+https://github.com/github/spec-kit.git@vX.Y.Z specify init . --ai claude
+uvx --from git+https://github.com/github/spec-kit.git specify init . --ai claude
 # or
-uvx --from git+https://github.com/github/spec-kit.git@vX.Y.Z specify init --here --ai claude
+uvx --from git+https://github.com/github/spec-kit.git specify init --here --ai claude
 ```
 **Benefits of persistent installation:**
@@ -101,13 +96,9 @@ uvx --from git+https://github.com/github/spec-kit.git@vX.Y.Z specify init --here
 - Better tool management with `uv tool list`, `uv tool upgrade`, `uv tool uninstall`
 - Cleaner shell configuration
 #### Option 3: Enterprise / Air-Gapped Installation
 If your environment blocks access to PyPI or GitHub, see the [Enterprise / Air-Gapped Installation](./docs/installation.md#enterprise--air-gapped-installation) guide for step-by-step instructions on using `pip download` to create portable, OS-specific wheel bundles on a connected machine.
 ### 2. Establish project principles
-Launch your AI assistant in the project directory. Most agents expose spec-kit as `/speckit.*` slash commands; Codex CLI in skills mode uses `$speckit-*` instead.
+Launch your AI assistant in the project directory. The `/speckit.*` commands are available in the assistant.
 Use the **`/speckit.constitution`** command to create your project's governing principles and development guidelines that will guide all subsequent development.
@@ -167,10 +158,6 @@ See Spec-Driven Development in action across different scenarios with these comm
 - **[Brownfield Java runtime extension](https://github.com/mnriem/spec-kit-java-brownfield-demo)** — Extends an existing open-source Jakarta EE runtime (Piranha, ~420,000 lines of Java, XML, JSP, HTML, and config files across 180 Maven modules) with a password-protected Server Admin Console, demonstrating spec-kit on a large multi-module Java project with no prior specs or constitution.
 - **[Brownfield Go / React dashboard demo](https://github.com/mnriem/spec-kit-go-brownfield-demo)** — Demonstrates spec-kit driven entirely from the **terminal using GitHub Copilot CLI**. Extends NASA's open-source Hermes ground support system (Go) with a lightweight React-based web telemetry dashboard, showing that the full constitution → specify → plan → tasks → implement workflow works from the terminal.
 - **[Greenfield Spring Boot MVC with a custom preset](https://github.com/mnriem/spec-kit-pirate-speak-preset-demo)** — Builds a Spring Boot MVC application from scratch using a custom pirate-speak preset, demonstrating how presets can reshape the entire spec-kit experience: specifications become "Voyage Manifests," plans become "Battle Plans," and tasks become "Crew Assignments" — all generated in full pirate vernacular without changing any tooling.
 ## 🤖 Supported AI Agents
 | Agent                                                                                | Support | Notes                                                                                                                                     |
@@ -181,7 +168,7 @@ See Spec-Driven Development in action across different scenarios with these comm
 | [Auggie CLI](https://docs.augmentcode.com/cli/overview)                              | ✅      |                                                                                                                                           |
 | [Claude Code](https://www.anthropic.com/claude-code)                                 | ✅      |                                                                                                                                           |
 | [CodeBuddy CLI](https://www.codebuddy.ai/cli)                                        | ✅      |                                                                                                                                           |
-| [Codex CLI](https://github.com/openai/codex)                                         | ✅      | Requires `--ai-skills`. Codex recommends [skills](https://developers.openai.com/codex/skills) and treats [custom prompts](https://developers.openai.com/codex/custom-prompts) as deprecated. Spec-kit installs Codex skills into `.agents/skills` and invokes them as `$speckit-<command>`. |
+| [Codex CLI](https://github.com/openai/codex)                                         | ✅      |                                                                                                                                           |
 | [Cursor](https://cursor.sh/)                                                         | ✅      |                                                                                                                                           |
 | [Gemini CLI](https://github.com/google-gemini/gemini-cli)                            | ✅      |                                                                                                                                           |
 | [GitHub Copilot](https://code.visualstudio.com/)                                     | ✅      |                                                                                                                                           |
@@ -189,18 +176,14 @@ See Spec-Driven Development in action across different scenarios with these comm
 | [Jules](https://jules.google.com/)                                                   | ✅      |                                                                                                                                           |
 | [Kilo Code](https://github.com/Kilo-Org/kilocode)                                    | ✅      |                                                                                                                                           |
 | [opencode](https://opencode.ai/)                                                     | ✅      |                                                                                                                                           |
 | [Pi Coding Agent](https://pi.dev)                                                    | ✅      | Pi doesn't have MCP support out of the box, so `taskstoissues` won't work as intended. MCP support can be added via [extensions](https://github.com/badlogic/pi-mono/tree/main/packages/coding-agent#extensions) |
 | [Qwen Code](https://github.com/QwenLM/qwen-code)                                     | ✅      |                                                                                                                                           |
 | [Roo Code](https://roocode.com/)                                                     | ✅      |                                                                                                                                           |
 | [SHAI (OVHcloud)](https://github.com/ovh/shai)                                       | ✅      |                                                                                                                                           |
 | [Tabnine CLI](https://docs.tabnine.com/main/getting-started/tabnine-cli)             | ✅      |                                                                                                                                           |
 | [Mistral Vibe](https://github.com/mistralai/mistral-vibe)                            | ✅      |                                                                                                                                           |
 | [Kimi Code](https://code.kimi.com/)                                                  | ✅      |                                                                                                                                           |
 | [iFlow CLI](https://docs.iflow.cn/en/cli/quickstart)                                 | ✅      |                                                                                                                                           |
 | [Windsurf](https://windsurf.com/)                                                    | ✅      |                                                                                                                                           |
 | [Junie](https://junie.jetbrains.com/)                                                | ✅      |                                                                                                                                           |
 | [Antigravity (agy)](https://antigravity.google/)                                     | ✅      | Requires `--ai-skills` |
 | [Trae](https://www.trae.ai/)                                                         | ✅      |                                                                                                                                           |
 | Generic                                                                              | ✅      | Bring your own agent — use `--ai generic --ai-commands-dir <path>` for unsupported agents                                                 |
 ## 🔧 Specify CLI Reference
@@ -209,28 +192,27 @@ The `specify` command supports the following options:
 ### Commands
-| Command | Description                                                                                                                                                                                                                                                                              |
+| Command | Description                                                                                                                                             |
-| ------- |------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|
+| ------- | ------------------------------------------------------------------------------------------------------------------------------------------------------- |
-| `init`  | Initialize a new Specify project from the latest template                                                                                                                                                                                                                                |
+| `init`  | Initialize a new Specify project from the latest template                                                                                               |
-| `check` | Check for installed tools: `git` plus all CLI-based agents configured in `AGENT_CONFIG` (for example: `claude`, `gemini`, `code`/`code-insiders`, `cursor-agent`, `windsurf`, `junie`, `qwen`, `opencode`, `codex`, `kiro-cli`, `shai`, `qodercli`, `vibe`, `kimi`, `iflow`, `pi`, etc.) |
+| `check` | Check for installed tools (`git`, `claude`, `gemini`, `code`/`code-insiders`, `cursor-agent`, `windsurf`, `qwen`, `opencode`, `codex`, `kiro-cli`, `shai`, `qodercli`, `vibe`, `kimi`) |
 ### `specify init` Arguments & Options
-| Argument/Option        | Type     | Description                                                                                                                                                                                                                                                                                                                                                                               |
+| Argument/Option        | Type     | Description                                                                                                                                                                                  |
-| ---------------------- | -------- |-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|
+| ---------------------- | -------- | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
-| `<project-name>`       | Argument | Name for your new project directory (optional if using `--here`, or use `.` for current directory)                                                                                                                                                                                                                                                                                        |
+| `<project-name>`       | Argument | Name for your new project directory (optional if using `--here`, or use `.` for current directory)                                                                                           |
-| `--ai`                 | Option   | AI assistant to use (see `AGENT_CONFIG` for the full, up-to-date list). Common options include: `claude`, `gemini`, `copilot`, `cursor-agent`, `qwen`, `opencode`, `codex`, `windsurf`, `junie`, `kilocode`, `auggie`, `roo`, `codebuddy`, `amp`, `shai`, `kiro-cli` (`kiro` alias), `agy`, `bob`, `qodercli`, `vibe`, `kimi`, `iflow`, `pi`, or `generic` (requires `--ai-commands-dir`) |
+| `--ai`                 | Option   | AI assistant to use: `claude`, `gemini`, `copilot`, `cursor-agent`, `qwen`, `opencode`, `codex`, `windsurf`, `kilocode`, `auggie`, `roo`, `codebuddy`, `amp`, `shai`, `kiro-cli` (`kiro` alias), `agy`, `bob`, `qodercli`, `vibe`, `kimi`, or `generic` (requires `--ai-commands-dir`) |
-| `--ai-commands-dir`    | Option   | Directory for agent command files (required with `--ai generic`, e.g. `.myagent/commands/`)                                                                                                                                                                                                                                                                                               |
+| `--ai-commands-dir`    | Option   | Directory for agent command files (required with `--ai generic`, e.g. `.myagent/commands/`)                                                                                                  |
-| `--script`             | Option   | Script variant to use: `sh` (bash/zsh) or `ps` (PowerShell)                                                                                                                                                                                                                                                                                                                               |
+| `--script`             | Option   | Script variant to use: `sh` (bash/zsh) or `ps` (PowerShell)                                                                                                                                  |
-| `--ignore-agent-tools` | Flag     | Skip checks for AI agent tools like Claude Code                                                                                                                                                                                                                                                                                                                                           |
+| `--ignore-agent-tools` | Flag     | Skip checks for AI agent tools like Claude Code                                                                                                                                              |
-| `--no-git`             | Flag     | Skip git repository initialization                                                                                                                                                                                                                                                                                                                                                        |
+| `--no-git`             | Flag     | Skip git repository initialization                                                                                                                                                           |
-| `--here`               | Flag     | Initialize project in the current directory instead of creating a new one                                                                                                                                                                                                                                                                                                                 |
+| `--here`               | Flag     | Initialize project in the current directory instead of creating a new one                                                                                                                    |
-| `--force`              | Flag     | Force merge/overwrite when initializing in current directory (skip confirmation)                                                                                                                                                                                                                                                                                                          |
+| `--force`              | Flag     | Force merge/overwrite when initializing in current directory (skip confirmation)                                                                                                             |
-| `--skip-tls`           | Flag     | Skip SSL/TLS verification (not recommended)                                                                                                                                                                                                                                                                                                                                               |
+| `--skip-tls`           | Flag     | Skip SSL/TLS verification (not recommended)                                                                                                                                                  |
-| `--debug`              | Flag     | Enable detailed debug output for troubleshooting                                                                                                                                                                                                                                                                                                                                          |
+| `--debug`              | Flag     | Enable detailed debug output for troubleshooting                                                                                                                                             |
-| `--github-token`       | Option   | GitHub token for API requests (or set GH_TOKEN/GITHUB_TOKEN env variable)                                                                                                                                                                                                                                                                                                                 |
+| `--github-token`       | Option   | GitHub token for API requests (or set GH_TOKEN/GITHUB_TOKEN env variable)                                                                                                                    |
-| `--ai-skills`          | Flag     | Install Prompt.MD templates as agent skills in agent-specific `skills/` directory (requires `--ai`)                                                                                                                                                                                                                                                                                       |
+| `--ai-skills`          | Flag     | Install Prompt.MD templates as agent skills in agent-specific `skills/` directory (requires `--ai`)                                                                                          |
 | `--branch-numbering`   | Option   | Branch numbering strategy: `sequential` (default — `001`, `002`, `003`) or `timestamp` (`YYYYMMDD-HHMMSS`). Timestamp mode is useful for distributed teams to avoid numbering conflicts                                                                                                                                                                                                  |
 ### Examples
@@ -265,12 +247,6 @@ specify init my-project --ai vibe
 # Initialize with IBM Bob support
 specify init my-project --ai bob
 # Initialize with Pi Coding Agent support
 specify init my-project --ai pi
 # Initialize with Codex CLI support
 specify init my-project --ai codex --ai-skills
 # Initialize with Antigravity support
 specify init my-project --ai agy --ai-skills
@@ -305,18 +281,13 @@ specify init my-project --ai claude --ai-skills
 # Initialize in current directory with agent skills
 specify init --here --ai gemini --ai-skills
 # Use timestamp-based branch numbering (useful for distributed teams)
 specify init my-project --ai claude --branch-numbering timestamp
 # Check system requirements
 specify check
 ```
 ### Available Slash Commands
-After running `specify init`, your AI coding agent will have access to these slash commands for structured development.
+After running `specify init`, your AI coding agent will have access to these slash commands for structured development:
 For Codex CLI, `--ai-skills` installs spec-kit as agent skills instead of slash-command prompt files. In Codex skills mode, invoke spec-kit as `$speckit-constitution`, `$speckit-specify`, `$speckit-plan`, `$speckit-tasks`, and `$speckit-implement`.
 #### Core Commands
@@ -346,68 +317,6 @@ Additional commands for enhanced quality and validation:
 | ----------------- | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
 | `SPECIFY_FEATURE` | Override feature detection for non-Git repositories. Set to the feature directory name (e.g., `001-photo-albums`) to work on a specific feature when not using Git branches.<br/>\*\*Must be set in the context of the agent you're working with prior to using `/speckit.plan` or follow-up commands. |
 ## 🧩 Making Spec Kit Your Own: Extensions & Presets
 Spec Kit can be tailored to your needs through two complementary systems — **extensions** and **presets** — plus project-local overrides for one-off adjustments:
 ```mermaid
 block-beta
    columns 1
    overrides["⬆ Highest priority\nProject-Local Overrides\n.specify/templates/overrides/"]
    presets["Presets — Customize core & extensions\n.specify/presets/<preset-id>/templates/"]
    extensions["Extensions — Add new capabilities\n.specify/extensions/<ext-id>/templates/"]
    core["Spec Kit Core — Built-in SDD commands & templates\n.specify/templates/\n⬇ Lowest priority"]
    style overrides fill:transparent,stroke:#999
    style presets fill:transparent,stroke:#4a9eda
    style extensions fill:transparent,stroke:#4a9e4a
    style core fill:transparent,stroke:#e6a817
 ```
 **Templates** are resolved at **runtime** — Spec Kit walks the stack top-down and uses the first match. Project-local overrides (`.specify/templates/overrides/`) let you make one-off adjustments for a single project without creating a full preset. **Commands** are applied at **install time** — when you run `specify extension add` or `specify preset add`, command files are written into agent directories (e.g., `.claude/commands/`). If multiple presets or extensions provide the same command, the highest-priority version wins. On removal, the next-highest-priority version is restored automatically. If no overrides or customizations exist, Spec Kit uses its core defaults.
 ### Extensions — Add New Capabilities
 Use **extensions** when you need functionality that goes beyond Spec Kit's core. Extensions introduce new commands and templates — for example, adding domain-specific workflows that are not covered by the built-in SDD commands, integrating with external tools, or adding entirely new development phases. They expand *what Spec Kit can do*.
 ```bash
 # Search available extensions
 specify extension search
 # Install an extension
 specify extension add <extension-name>
 ```
 For example, extensions could add Jira integration, post-implementation code review, V-Model test traceability, or project health diagnostics.
 See the [Extensions README](./extensions/README.md) for the full guide, the complete community catalog, and how to build and publish your own.
 ### Presets — Customize Existing Workflows
 Use **presets** when you want to change *how* Spec Kit works without adding new capabilities. Presets override the templates and commands that ship with the core *and* with installed extensions — for example, enforcing a compliance-oriented spec format, using domain-specific terminology, or applying organizational standards to plans and tasks. They customize the artifacts and instructions that Spec Kit and its extensions produce.
 ```bash
 # Search available presets
 specify preset search
 # Install a preset
 specify preset add <preset-name>
 ```
 For example, presets could restructure spec templates to require regulatory traceability, adapt the workflow to fit the methodology you use (e.g., Agile, Kanban, Waterfall, jobs-to-be-done, or domain-driven design), add mandatory security review gates to plans, enforce test-first task ordering, or localize the entire workflow to a different language. The [pirate-speak demo](https://github.com/mnriem/spec-kit-pirate-speak-preset-demo) shows just how deep the customization can go. Multiple presets can be stacked with priority ordering.
 See the [Presets README](./presets/README.md) for the full guide, including resolution order, priority, and how to create your own.
 ### When to Use Which
 | Goal | Use |
 | --- | --- |
 | Add a brand-new command or workflow | Extension |
 | Customize the format of specs, plans, or tasks | Preset |
 | Integrate an external tool or service | Extension |
 | Enforce organizational or regulatory standards | Preset |
 | Ship reusable domain-specific templates | Either — presets for template overrides, extensions for templates bundled with new commands |
 ## 📚 Core Philosophy
 Spec-Driven Development is a structured process that emphasizes:
@@ -502,11 +411,11 @@ specify init <project_name> --ai copilot
 # Or in current directory:
 specify init . --ai claude
-specify init . --ai codex --ai-skills
+specify init . --ai codex
 # or use --here flag
 specify init --here --ai claude
-specify init --here --ai codex --ai-skills
+specify init --here --ai codex
 # Force merge into a non-empty current directory
 specify init . --force --ai claude
@@ -515,7 +424,7 @@ specify init . --force --ai claude
 specify init --here --force --ai claude
 ```
-The CLI will check if you have Claude Code, Gemini CLI, Cursor CLI, Qwen CLI, opencode, Codex CLI, Qoder CLI, Tabnine CLI, Kiro CLI, Pi, or Mistral Vibe installed. If you do not, or you prefer to get the templates without checking for the right tools, use `--ignore-agent-tools` with your command:
+The CLI will check if you have Claude Code, Gemini CLI, Cursor CLI, Qwen CLI, opencode, Codex CLI, Qoder CLI, Tabnine CLI, Kiro CLI, or Mistral Vibe installed. If you do not, or you prefer to get the templates without checking for the right tools, use `--ignore-agent-tools` with your command:
 ```bash
 specify init <project_name> --ai claude --ignore-agent-tools
--- a/SUPPORT.md
+++ b/SUPPORT.md
@@ -1,17 +1,18 @@
 # Support
-## How to get help
+## How to file issues and get help
-Please search existing [issues](https://github.com/github/spec-kit/issues) and [discussions](https://github.com/github/spec-kit/discussions) before creating new ones to avoid duplicates.
+This project uses GitHub issues to track bugs and feature requests. Please search the existing issues before filing new issues to avoid duplicates. For new issues, file your bug or feature request as a new issue.
- Review the [README](./README.md) for getting started instructions and troubleshooting tips
+For help or questions about using this project, please:
 - Open a [GitHub issue](https://github.com/github/spec-kit/issues/new) for bug reports, feature requests, or questions about the Spec-Driven Development methodology
 - Check the [comprehensive guide](./spec-driven.md) for detailed documentation on the Spec-Driven Development process
- Ask in [GitHub Discussions](https://github.com/github/spec-kit/discussions) for questions about using Spec Kit or the Spec-Driven Development methodology
+- Review the [README](./README.md) for getting started instructions and troubleshooting tips
 - Open a [GitHub issue](https://github.com/github/spec-kit/issues/new) for bug reports and feature requests
 ## Project Status
-**Spec Kit** is under active development and maintained by GitHub staff and the community. We will do our best to respond to support, feature requests, and community questions as time permits.
+**Spec Kit** is under active development and maintained by GitHub staff **AND THE COMMUNITY**. We will do our best to respond to support, feature requests, and community questions in a timely manner.
 ## GitHub Support Policy
--- a/docs/installation.md
+++ b/docs/installation.md
@@ -3,7 +3,7 @@
 ## Prerequisites
 - **Linux/macOS** (or Windows; PowerShell scripts now supported without WSL)
- AI coding agent: [Claude Code](https://www.anthropic.com/claude-code), [GitHub Copilot](https://code.visualstudio.com/), [Codebuddy CLI](https://www.codebuddy.ai/cli), [Gemini CLI](https://github.com/google-gemini/gemini-cli), or [Pi Coding Agent](https://pi.dev)
+- AI coding agent: [Claude Code](https://www.anthropic.com/claude-code), [GitHub Copilot](https://code.visualstudio.com/), [Codebuddy CLI](https://www.codebuddy.ai/cli) or [Gemini CLI](https://github.com/google-gemini/gemini-cli)
 - [uv](https://docs.astral.sh/uv/) for package management
 - [Python 3.11+](https://www.python.org/downloads/)
 - [Git](https://git-scm.com/downloads)
@@ -12,22 +12,18 @@
 ### Initialize a New Project
-The easiest way to get started is to initialize a new project. Pin a specific release tag for stability (check [Releases](https://github.com/github/spec-kit/releases) for the latest):
+The easiest way to get started is to initialize a new project:
 ```bash
 # Install from a specific stable release (recommended — replace vX.Y.Z with the latest tag)
 uvx --from git+https://github.com/github/spec-kit.git@vX.Y.Z specify init <PROJECT_NAME>
 # Or install latest from main (may include unreleased changes)
 uvx --from git+https://github.com/github/spec-kit.git specify init <PROJECT_NAME>
 ```
 Or initialize in the current directory:
 ```bash
-uvx --from git+https://github.com/github/spec-kit.git@vX.Y.Z specify init .
+uvx --from git+https://github.com/github/spec-kit.git specify init .
 # or use the --here flag
-uvx --from git+https://github.com/github/spec-kit.git@vX.Y.Z specify init --here
+uvx --from git+https://github.com/github/spec-kit.git specify init --here
 ```
 ### Specify AI Agent
@@ -35,11 +31,10 @@ uvx --from git+https://github.com/github/spec-kit.git@vX.Y.Z specify init --here
 You can proactively specify your AI agent during initialization:
 ```bash
-uvx --from git+https://github.com/github/spec-kit.git@vX.Y.Z specify init <project_name> --ai claude
+uvx --from git+https://github.com/github/spec-kit.git specify init <project_name> --ai claude
-uvx --from git+https://github.com/github/spec-kit.git@vX.Y.Z specify init <project_name> --ai gemini
+uvx --from git+https://github.com/github/spec-kit.git specify init <project_name> --ai gemini
-uvx --from git+https://github.com/github/spec-kit.git@vX.Y.Z specify init <project_name> --ai copilot
+uvx --from git+https://github.com/github/spec-kit.git specify init <project_name> --ai copilot
-uvx --from git+https://github.com/github/spec-kit.git@vX.Y.Z specify init <project_name> --ai codebuddy
+uvx --from git+https://github.com/github/spec-kit.git specify init <project_name> --ai codebuddy
 uvx --from git+https://github.com/github/spec-kit.git@vX.Y.Z specify init <project_name> --ai pi
 ```
 ### Specify Script Type (Shell vs PowerShell)
@@ -55,8 +50,8 @@ Auto behavior:
 Force a specific script type:
 ```bash
-uvx --from git+https://github.com/github/spec-kit.git@vX.Y.Z specify init <project_name> --script sh
+uvx --from git+https://github.com/github/spec-kit.git specify init <project_name> --script sh
-uvx --from git+https://github.com/github/spec-kit.git@vX.Y.Z specify init <project_name> --script ps
+uvx --from git+https://github.com/github/spec-kit.git specify init <project_name> --script ps
 ```
 ### Ignore Agent Tools Check
@@ -64,7 +59,7 @@ uvx --from git+https://github.com/github/spec-kit.git@vX.Y.Z specify init <proje
 If you prefer to get the templates without checking for the right tools:
 ```bash
-uvx --from git+https://github.com/github/spec-kit.git@vX.Y.Z specify init <project_name> --ai claude --ignore-agent-tools
+uvx --from git+https://github.com/github/spec-kit.git specify init <project_name> --ai claude --ignore-agent-tools
 ```
 ## Verification
@@ -79,52 +74,6 @@ The `.specify/scripts` directory will contain both `.sh` and `.ps1` scripts.
 ## Troubleshooting
 ### Enterprise / Air-Gapped Installation
 If your environment blocks access to PyPI (you see 403 errors when running `uv tool install` or `pip install`), you can create a portable wheel bundle on a connected machine and transfer it to the air-gapped target.
 **Step 1: Build the wheel on a connected machine (same OS and Python version as the target)**
 ```bash
 # Clone the repository
 git clone https://github.com/github/spec-kit.git
 cd spec-kit
 # Build the wheel
 pip install build
 python -m build --wheel --outdir dist/
 # Download the wheel and all its runtime dependencies
 pip download -d dist/ dist/specify_cli-*.whl
 ```
 > **Important:** `pip download` resolves platform-specific wheels (e.g., PyYAML includes native extensions). You must run this step on a machine with the **same OS and Python version** as the air-gapped target. If you need to support multiple platforms, repeat this step on each target OS (Linux, macOS, Windows) and Python version.
 **Step 2: Transfer the `dist/` directory to the air-gapped machine**
 Copy the entire `dist/` directory (which contains the `specify-cli` wheel and all dependency wheels) to the target machine via USB, network share, or other approved transfer method.
 **Step 3: Install on the air-gapped machine**
 ```bash
 pip install --no-index --find-links=./dist specify-cli
 ```
 **Step 4: Initialize a project (no network required)**
 ```bash
 # Initialize a project — no GitHub access needed
 specify init my-project --ai claude --offline
 ```
 The `--offline` flag tells the CLI to use the templates, commands, and scripts bundled inside the wheel instead of downloading from GitHub.
 > **Deprecation notice:** Starting with v0.6.0, `specify init` will use bundled assets by default and the `--offline` flag will be removed. The GitHub download path will be retired because bundled assets eliminate the need for network access, avoid proxy/firewall issues, and guarantee that templates always match the installed CLI version. No action will be needed — `specify init` will simply work without network access out of the box.
 > **Note:** Python 3.11+ is required.
 > **Windows note:** Offline scaffolding requires PowerShell 7+ (`pwsh`), not Windows PowerShell 5.x (`powershell.exe`). Install from https://aka.ms/powershell.
 ### Git Credential Manager on Linux
 If you're having issues with Git authentication on Linux, you can install Git Credential Manager:
--- a/docs/upgrade.md
+++ b/docs/upgrade.md
@@ -8,7 +8,7 @@
 | What to Upgrade | Command | When to Use |
 |----------------|---------|-------------|
-| **CLI Tool Only** | `uv tool install specify-cli --force --from git+https://github.com/github/spec-kit.git@vX.Y.Z` | Get latest CLI features without touching project files |
+| **CLI Tool Only** | `uv tool install specify-cli --force --from git+https://github.com/github/spec-kit.git` | Get latest CLI features without touching project files |
 | **Project Files** | `specify init --here --force --ai <your-agent>` | Update slash commands, templates, and scripts in your project |
 | **Both** | Run CLI upgrade, then project update | Recommended for major version updates |
@@ -20,18 +20,16 @@ The CLI tool (`specify`) is separate from your project files. Upgrade it to get
 ### If you installed with `uv tool install`
 Upgrade to a specific release (check [Releases](https://github.com/github/spec-kit/releases) for the latest tag):
 ```bash
-uv tool install specify-cli --force --from git+https://github.com/github/spec-kit.git@vX.Y.Z
+uv tool install specify-cli --force --from git+https://github.com/github/spec-kit.git
 ```
 ### If you use one-shot `uvx` commands
-Specify the desired release tag:
+No upgrade needed—`uvx` always fetches the latest version. Just run your commands as normal:
 ```bash
-uvx --from git+https://github.com/github/spec-kit.git@vX.Y.Z specify init --here --ai copilot
+uvx --from git+https://github.com/github/spec-kit.git specify init --here --ai copilot
 ```
 ### Verify the upgrade
@@ -291,9 +289,8 @@ This tells Spec Kit which feature directory to use when creating specs, plans, a
   ```bash
   ls -la .claude/commands/      # Claude Code
-   ls -la .gemini/commands/      # Gemini
+   ls -la .gemini/commands/       # Gemini
-   ls -la .cursor/commands/      # Cursor
+   ls -la .cursor/commands/       # Cursor
   ls -la .pi/prompts/           # Pi Coding Agent
   ```
 3. **Check agent-specific setup:**
@@ -401,7 +398,7 @@ The `specify` CLI tool is used for:
 - **Upgrades:** `specify init --here --force` to update templates and commands
 - **Diagnostics:** `specify check` to verify tool installation
-Once you've run `specify init`, the slash commands (like `/speckit.specify`, `/speckit.plan`, etc.) are **permanently installed** in your project's agent folder (`.claude/`, `.github/prompts/`, `.pi/prompts/`, etc.). Your AI assistant reads these command files directly—no need to run `specify` again.
+Once you've run `specify init`, the slash commands (like `/speckit.specify`, `/speckit.plan`, etc.) are **permanently installed** in your project's agent folder (`.claude/`, `.github/prompts/`, etc.). Your AI assistant reads these command files directly—no need to run `specify` again.
 **If your agent isn't recognizing slash commands:**
@@ -413,9 +410,6 @@ Once you've run `specify init`, the slash commands (like `/speckit.specify`, `/s
   # For Claude
   ls -la .claude/commands/
   # For Pi
   ls -la .pi/prompts/
   ```
 2. **Restart your IDE/editor completely** (not just reload window)
--- a/extensions/EXTENSION-API-REFERENCE.md
+++ b/extensions/EXTENSION-API-REFERENCE.md
@@ -53,7 +53,7 @@ provides:
      required: boolean  # Default: false
 hooks:                   # Optional, event hooks
-  event_name:            # e.g., "after_specify", "after_plan", "after_tasks", "after_implement"
+  event_name:            # e.g., "after_tasks", "after_implement"
    command: string      # Command to execute
    optional: boolean    # Default: true
    prompt: string       # Prompt text for optional hooks
@@ -108,7 +108,7 @@ defaults:                # Optional, default configuration values
 #### `hooks`
 - **Type**: object
- **Keys**: Event names (e.g., `after_specify`, `after_plan`, `after_tasks`, `after_implement`, `before_commit`)
+- **Keys**: Event names (e.g., `after_tasks`, `after_implement`, `before_commit`)
 - **Description**: Hooks that execute at lifecycle events
 - **Events**: Defined by core spec-kit commands
@@ -551,16 +551,10 @@ hooks:
 Standard events (defined by core):
 - `before_specify` - Before specification generation
 - `after_specify` - After specification generation
 - `before_plan` - Before implementation planning
 - `after_plan` - After implementation planning
 - `before_tasks` - Before task generation
 - `after_tasks` - After task generation
 - `before_implement` - Before implementation
 - `after_implement` - After implementation
- `before_commit` - Before git commit *(planned - not yet wired into core templates)*
+- `before_commit` - Before git commit
- `after_commit` - After git commit *(planned - not yet wired into core templates)*
+- `after_commit` - After git commit
 ### Hook Configuration
--- a/extensions/EXTENSION-PUBLISHING-GUIDE.md
+++ b/extensions/EXTENSION-PUBLISHING-GUIDE.md
@@ -209,22 +209,9 @@ Edit `extensions/catalog.community.json` and add your extension:
 Add your extension to the Available Extensions table in `extensions/README.md`:
 ```markdown
-| Your Extension Name | Brief description of what it does | `<category>` | <effect> | [repo-name](https://github.com/your-org/spec-kit-your-extension) |
+| Your Extension Name | Brief description of what it does | [repo-name](https://github.com/your-org/spec-kit-your-extension) |
 ```
 **(Table) Category** — pick the one that best fits your extension:
 - `docs` — reads, validates, or generates spec artifacts
 - `code` — reviews, validates, or modifies source code
 - `process` — orchestrates workflow across phases
 - `integration` — syncs with external platforms
 - `visibility` — reports on project health or progress
 **Effect** — choose one:
 - Read-only — produces reports without modifying files
 - Read+Write — modifies files, creates artifacts, or updates specs
 Insert your extension in alphabetical order in the table.
 ### 4. Submit Pull Request
--- a/extensions/EXTENSION-USER-GUIDE.md
+++ b/extensions/EXTENSION-USER-GUIDE.md
@@ -387,9 +387,6 @@ settings:
  auto_execute_hooks: true
 # Hook configuration
 # Available events: before_specify, after_specify, before_plan, after_plan,
 #                   before_tasks, after_tasks, before_implement, after_implement
 # Planned (not yet wired into core templates): before_commit, after_commit
 hooks:
  after_tasks:
    - extension: jira
--- a/extensions/README.md
+++ b/extensions/README.md
@@ -70,34 +70,20 @@ specify extension add --from https://github.com/org/spec-kit-ext/archive/refs/ta
 The following community-contributed extensions are available in [`catalog.community.json`](catalog.community.json):
-**Categories:** `docs` — reads, validates, or generates spec artifacts · `code` — reviews, validates, or modifies source code · `process` — orchestrates workflow across phases · `integration` — syncs with external platforms · `visibility` — reports on project health or progress
+| Extension | Purpose | URL |
-
+|-----------|---------|-----|
-**Effect:** `Read-only` — produces reports without modifying files · `Read+Write` — modifies files, creates artifacts, or updates specs
+| Azure DevOps Integration | Sync user stories and tasks to Azure DevOps work items using OAuth authentication | [spec-kit-azure-devops](https://github.com/pragya247/spec-kit-azure-devops) |
-
+| Cleanup Extension | Post-implementation quality gate that reviews changes, fixes small issues (scout rule), creates tasks for medium issues, and generates analysis for large issues | [spec-kit-cleanup](https://github.com/dsrednicki/spec-kit-cleanup) |
-| Extension | Purpose | Category | Effect | URL |
+| Fleet Orchestrator | Orchestrate a full feature lifecycle with human-in-the-loop gates across all SpecKit phases | [spec-kit-fleet](https://github.com/sharathsatish/spec-kit-fleet) |
-|-----------|---------|----------|--------|-----|
+| Jira Integration | Create Jira Epics, Stories, and Issues from spec-kit specifications and task breakdowns with configurable hierarchy and custom field support | [spec-kit-jira](https://github.com/mbachorik/spec-kit-jira) |
-| Archive Extension | Archive merged features into main project memory. | `docs` | Read+Write | [spec-kit-archive](https://github.com/stn1slv/spec-kit-archive) |
+| Project Health Check | Diagnose a Spec Kit project and report health issues across structure, agents, features, scripts, extensions, and git | [spec-kit-doctor](https://github.com/KhawarHabibKhan/spec-kit-doctor) |
-| Azure DevOps Integration | Sync user stories and tasks to Azure DevOps work items using OAuth authentication | `integration` | Read+Write | [spec-kit-azure-devops](https://github.com/pragya247/spec-kit-azure-devops) |
+| Ralph Loop | Autonomous implementation loop using AI agent CLI | [spec-kit-ralph](https://github.com/Rubiss/spec-kit-ralph) |
-| Cleanup Extension | Post-implementation quality gate that reviews changes, fixes small issues (scout rule), creates tasks for medium issues, and generates analysis for large issues | `code` | Read+Write | [spec-kit-cleanup](https://github.com/dsrednicki/spec-kit-cleanup) |
+| Retrospective Extension | Post-implementation retrospective with spec adherence scoring, drift analysis, and human-gated spec updates | [spec-kit-retrospective](https://github.com/emi-dm/spec-kit-retrospective) |
-| Cognitive Squad | Multi-agent cognitive system with Triadic Model: understanding, internalization, application — with quality gates, backpropagation verification, and self-healing | `docs` | Read+Write | [cognitive-squad](https://github.com/Testimonial/cognitive-squad) |
+| Review Extension | Post-implementation comprehensive code review with specialized agents for code quality, comments, tests, error handling, type design, and simplification | [spec-kit-review](https://github.com/ismaelJimenez/spec-kit-review) |
-| Conduct Extension | Orchestrates spec-kit phases via sub-agent delegation to reduce context pollution. | `process` | Read+Write | [spec-kit-conduct-ext](https://github.com/twbrandon7/spec-kit-conduct-ext) |
+| Spec Sync | Detect and resolve drift between specs and implementation. AI-assisted resolution with human approval | [spec-kit-sync](https://github.com/bgervin/spec-kit-sync) |
-| DocGuard — CDD Enforcement | Canonical-Driven Development enforcement. Validates, scores, and traces project documentation with automated checks, AI-driven workflows, and spec-kit hooks. Zero NPM runtime dependencies. | `docs` | Read+Write | [spec-kit-docguard](https://github.com/raccioly/docguard) |
+| Understanding | Automated requirements quality analysis — 31 deterministic metrics against IEEE/ISO standards with experimental energy-based ambiguity detection | [understanding](https://github.com/Testimonial/understanding) |
-| Fleet Orchestrator | Orchestrate a full feature lifecycle with human-in-the-loop gates across all SpecKit phases | `process` | Read+Write | [spec-kit-fleet](https://github.com/sharathsatish/spec-kit-fleet) |
+| V-Model Extension Pack | Enforces V-Model paired generation of development specs and test specs with full traceability | [spec-kit-v-model](https://github.com/leocamello/spec-kit-v-model) |
-| Iterate | Iterate on spec documents with a two-phase define-and-apply workflow — refine specs mid-implementation and go straight back to building | `docs` | Read+Write | [spec-kit-iterate](https://github.com/imviancagrace/spec-kit-iterate) |
+| Verify Extension | Post-implementation quality gate that validates implemented code against specification artifacts | [spec-kit-verify](https://github.com/ismaelJimenez/spec-kit-verify) |
 | Jira Integration | Create Jira Epics, Stories, and Issues from spec-kit specifications and task breakdowns with configurable hierarchy and custom field support | `integration` | Read+Write | [spec-kit-jira](https://github.com/mbachorik/spec-kit-jira) |
 | Learning Extension | Generate educational guides from implementations and enhance clarifications with mentoring context | `docs` | Read+Write | [spec-kit-learn](https://github.com/imviancagrace/spec-kit-learn) |
 | Project Health Check | Diagnose a Spec Kit project and report health issues across structure, agents, features, scripts, extensions, and git | `visibility` | Read-only | [spec-kit-doctor](https://github.com/KhawarHabibKhan/spec-kit-doctor) |
 | Project Status | Show current SDD workflow progress — active feature, artifact status, task completion, workflow phase, and extensions summary | `visibility` | Read-only | [spec-kit-status](https://github.com/KhawarHabibKhan/spec-kit-status) |
 | Ralph Loop | Autonomous implementation loop using AI agent CLI | `code` | Read+Write | [spec-kit-ralph](https://github.com/Rubiss/spec-kit-ralph) |
 | Reconcile Extension | Reconcile implementation drift by surgically updating feature artifacts. | `docs` | Read+Write | [spec-kit-reconcile](https://github.com/stn1slv/spec-kit-reconcile) |
 | Retrospective Extension | Post-implementation retrospective with spec adherence scoring, drift analysis, and human-gated spec updates | `docs` | Read+Write | [spec-kit-retrospective](https://github.com/emi-dm/spec-kit-retrospective) |
 | Review Extension | Post-implementation comprehensive code review with specialized agents for code quality, comments, tests, error handling, type design, and simplification | `code` | Read-only | [spec-kit-review](https://github.com/ismaelJimenez/spec-kit-review) |
 | SDD Utilities | Resume interrupted workflows, validate project health, and verify spec-to-task traceability | `process` | Read+Write | [speckit-utils](https://github.com/mvanhorn/speckit-utils) |
 | Spec Sync | Detect and resolve drift between specs and implementation. AI-assisted resolution with human approval | `docs` | Read+Write | [spec-kit-sync](https://github.com/bgervin/spec-kit-sync) |
 | Understanding | Automated requirements quality analysis — 31 deterministic metrics against IEEE/ISO standards with experimental energy-based ambiguity detection | `docs` | Read-only | [understanding](https://github.com/Testimonial/understanding) |
 | V-Model Extension Pack | Enforces V-Model paired generation of development specs and test specs with full traceability | `docs` | Read+Write | [spec-kit-v-model](https://github.com/leocamello/spec-kit-v-model) |
 | Verify Extension | Post-implementation quality gate that validates implemented code against specification artifacts | `code` | Read-only | [spec-kit-verify](https://github.com/ismaelJimenez/spec-kit-verify) |
 | Verify Tasks Extension | Detect phantom completions: tasks marked [X] in tasks.md with no real implementation | `code` | Read-only | [spec-kit-verify-tasks](https://github.com/datastone-inc/spec-kit-verify-tasks) |
 ## Adding Your Extension
--- a/extensions/RFC-EXTENSION-SYSTEM.md
+++ b/extensions/RFC-EXTENSION-SYSTEM.md
@@ -359,15 +359,12 @@ specify extension add jira
      "installed_at": "2026-01-28T14:30:00Z",
      "source": "catalog",
      "manifest_hash": "sha256:abc123...",
-      "enabled": true,
+      "enabled": true
      "priority": 10
    }
  }
 }
 ```
 **Priority Field**: Extensions are ordered by `priority` (lower = higher precedence). Default is 10. Used for template resolution when multiple extensions provide the same template.
 ### 3. Configuration
 ```bash
@@ -1087,15 +1084,11 @@ List installed extensions in current project.
 $ specify extension list
 Installed Extensions:
-  ✓ Jira Integration (v1.0.0)
+  ✓ jira (v1.0.0) - Jira Integration
-     jira
+    Commands: 3 | Hooks: 2 | Status: Enabled
     Create Jira issues from spec-kit artifacts
     Commands: 3 | Hooks: 2 | Priority: 10 | Status: Enabled
-  ✓ Linear Integration (v0.9.0)
+  ✓ linear (v0.9.0) - Linear Integration
-     linear
+    Commands: 1 | Hooks: 1 | Status: Enabled
     Create Linear issues from spec-kit artifacts
     Commands: 1 | Hooks: 1 | Priority: 10 | Status: Enabled
 ```
 **Options:**
@@ -1203,9 +1196,10 @@ Next steps:
 **Options:**
- `--from URL`: Install from a remote URL (archive). Does not accept Git repositories directly.
+- `--from URL`: Install from custom URL or Git repo
- `--dev`: Install from a local path in development mode (the PATH is the positional `extension` argument).
+- `--version VERSION`: Install specific version
- `--priority NUMBER`: Set resolution priority (lower = higher precedence, default 10)
+- `--dev PATH`: Install from local path (development mode)
 - `--no-register`: Skip command registration (manual setup)
 #### `specify extension remove NAME`
@@ -1286,29 +1280,6 @@ $ specify extension disable jira
 To re-enable: specify extension enable jira
 ```
 #### `specify extension set-priority NAME PRIORITY`
 Change the resolution priority of an installed extension.
 ```bash
 $ specify extension set-priority jira 5
 ✓ Extension 'Jira Integration' priority changed: 10 → 5
 Lower priority = higher precedence in template resolution
 ```
 **Priority Values:**
 - Lower numbers = higher precedence (checked first in resolution)
 - Default priority is 10
 - Must be a positive integer (1 or higher)
 **Use Cases:**
 - Ensure a critical extension's templates take precedence
 - Override default resolution order when multiple extensions provide similar templates
 ---
 ## Compatibility & Versioning
--- a/extensions/catalog.community.json
+++ b/extensions/catalog.community.json
@@ -1,39 +1,8 @@
 {
  "schema_version": "1.0",
-  "updated_at": "2026-03-19T12:08:20Z",
+  "updated_at": "2026-03-13T12:00:00Z",
  "catalog_url": "https://raw.githubusercontent.com/github/spec-kit/main/extensions/catalog.community.json",
  "extensions": {
    "archive": {
      "name": "Archive Extension",
      "id": "archive",
      "description": "Archive merged features into main project memory, resolving gaps and conflicts.",
      "author": "Stanislav Deviatov",
      "version": "1.0.0",
      "download_url": "https://github.com/stn1slv/spec-kit-archive/archive/refs/tags/v1.0.0.zip",
      "repository": "https://github.com/stn1slv/spec-kit-archive",
      "homepage": "https://github.com/stn1slv/spec-kit-archive",
      "documentation": "https://github.com/stn1slv/spec-kit-archive/blob/main/README.md",
      "changelog": "https://github.com/stn1slv/spec-kit-archive/blob/main/CHANGELOG.md",
      "license": "MIT",
      "requires": {
        "speckit_version": ">=0.1.0"
      },
      "provides": {
        "commands": 1,
        "hooks": 0
      },
      "tags": [
        "archive",
        "memory",
        "merge",
        "changelog"
      ],
      "verified": false,
      "downloads": 0,
      "stars": 0,
      "created_at": "2026-03-14T00:00:00Z",
      "updated_at": "2026-03-14T00:00:00Z"
    },
    "azure-devops": {
      "name": "Azure DevOps Integration",
      "id": "azure-devops",
@@ -105,122 +74,6 @@
      "created_at": "2026-02-22T00:00:00Z",
      "updated_at": "2026-02-22T00:00:00Z"
    },
    "cognitive-squad": {
      "name": "Cognitive Squad",
      "id": "cognitive-squad",
      "description": "Multi-agent cognitive system with Triadic Model: understanding, internalization, application — with quality gates, backpropagation verification, and self-healing",
      "author": "Testimonial",
      "version": "0.1.0",
      "download_url": "https://github.com/Testimonial/cognitive-squad/archive/refs/tags/v0.1.0.zip",
      "repository": "https://github.com/Testimonial/cognitive-squad",
      "homepage": "https://github.com/Testimonial/cognitive-squad",
      "documentation": "https://github.com/Testimonial/cognitive-squad/blob/main/README.md",
      "changelog": "https://github.com/Testimonial/cognitive-squad/blob/main/CHANGELOG.md",
      "license": "MIT",
      "requires": {
        "speckit_version": ">=0.3.0",
        "tools": [
          {
            "name": "understanding",
            "version": ">=3.4.0",
            "required": false
          },
          {
            "name": "spec-kit-reverse-eng",
            "version": ">=1.0.0",
            "required": false
          }
        ]
      },
      "provides": {
        "commands": 10,
        "hooks": 1
      },
      "tags": [
        "ai-agents",
        "cognitive",
        "full-lifecycle",
        "verification",
        "multi-agent"
      ],
      "verified": false,
      "downloads": 0,
      "stars": 0,
      "created_at": "2026-03-16T00:00:00Z",
      "updated_at": "2026-03-18T00:00:00Z"
    },
    "conduct": {
      "name": "Conduct Extension",
      "id": "conduct",
      "description": "Executes a single spec-kit phase via sub-agent delegation to reduce context pollution.",
      "author": "twbrandon7",
      "version": "1.0.0",
      "download_url": "https://github.com/twbrandon7/spec-kit-conduct-ext/archive/refs/tags/v1.0.0.zip",
      "repository": "https://github.com/twbrandon7/spec-kit-conduct-ext",
      "homepage": "https://github.com/twbrandon7/spec-kit-conduct-ext",
      "documentation": "https://github.com/twbrandon7/spec-kit-conduct-ext/blob/main/README.md",
      "changelog": "https://github.com/twbrandon7/spec-kit-conduct-ext/blob/main/CHANGELOG.md",
      "license": "MIT",
      "requires": {
        "speckit_version": ">=0.3.1"
      },
      "provides": {
        "commands": 1,
        "hooks": 0
      },
      "tags": [
        "conduct",
        "workflow",
        "automation"
      ],
      "verified": false,
      "downloads": 0,
      "stars": 0,
      "created_at": "2026-03-19T12:08:20Z",
      "updated_at": "2026-03-19T12:08:20Z"
    },
    "docguard": {
      "name": "DocGuard \u2014 CDD Enforcement",
      "id": "docguard",
      "description": "Canonical-Driven Development enforcement. Validates, scores, and traces project documentation with automated checks, AI-driven workflows, and spec-kit hooks. Zero NPM runtime dependencies.",
      "author": "raccioly",
      "version": "0.9.11",
      "download_url": "https://github.com/raccioly/docguard/releases/download/v0.9.11/spec-kit-docguard-v0.9.11.zip",
      "repository": "https://github.com/raccioly/docguard",
      "homepage": "https://www.npmjs.com/package/docguard-cli",
      "documentation": "https://github.com/raccioly/docguard/blob/main/extensions/spec-kit-docguard/README.md",
      "changelog": "https://github.com/raccioly/docguard/blob/main/CHANGELOG.md",
      "license": "MIT",
      "requires": {
        "speckit_version": ">=0.1.0",
        "tools": [
          {
            "name": "node",
            "version": ">=18.0.0",
            "required": true
          }
        ]
      },
      "provides": {
        "commands": 6,
        "hooks": 3
      },
      "tags": [
        "documentation",
        "validation",
        "quality",
        "cdd",
        "traceability",
        "ai-agents",
        "enforcement",
        "spec-kit"
      ],
      "verified": false,
      "downloads": 0,
      "stars": 0,
      "created_at": "2026-03-13T00:00:00Z",
      "updated_at": "2026-03-18T18:53:31Z"
    },
    "doctor": {
      "name": "Project Health Check",
      "id": "doctor",
@@ -271,48 +124,13 @@
        "commands": 2,
        "hooks": 1
      },
-      "tags": [
+      "tags": ["orchestration", "workflow", "human-in-the-loop", "parallel"],
        "orchestration",
        "workflow",
        "human-in-the-loop",
        "parallel"
      ],
      "verified": false,
      "downloads": 0,
      "stars": 0,
      "created_at": "2026-03-06T00:00:00Z",
      "updated_at": "2026-03-06T00:00:00Z"
    },
    "iterate": {
      "name": "Iterate",
      "id": "iterate",
      "description": "Iterate on spec documents with a two-phase define-and-apply workflow — refine specs mid-implementation and go straight back to building",
      "author": "Vianca Martinez",
      "version": "2.0.0",
      "download_url": "https://github.com/imviancagrace/spec-kit-iterate/archive/refs/tags/v2.0.0.zip",
      "repository": "https://github.com/imviancagrace/spec-kit-iterate",
      "homepage": "https://github.com/imviancagrace/spec-kit-iterate",
      "documentation": "https://github.com/imviancagrace/spec-kit-iterate/blob/main/README.md",
      "changelog": "https://github.com/imviancagrace/spec-kit-iterate/blob/main/CHANGELOG.md",
      "license": "MIT",
      "requires": {
        "speckit_version": ">=0.1.0"
      },
      "provides": {
        "commands": 2,
        "hooks": 0
      },
      "tags": [
        "iteration",
        "change-management",
        "spec-maintenance"
      ],
      "verified": false,
      "downloads": 0,
      "stars": 0,
      "created_at": "2026-03-17T00:00:00Z",
      "updated_at": "2026-03-17T00:00:00Z"
    },
    "jira": {
      "name": "Jira Integration",
      "id": "jira",
@@ -373,49 +191,13 @@
        "commands": 2,
        "hooks": 1
      },
-      "tags": [
+      "tags": ["implementation", "automation", "loop", "copilot"],
        "implementation",
        "automation",
        "loop",
        "copilot"
      ],
      "verified": false,
      "downloads": 0,
      "stars": 0,
      "created_at": "2026-03-09T00:00:00Z",
      "updated_at": "2026-03-09T00:00:00Z"
    },
    "reconcile": {
      "name": "Reconcile Extension",
      "id": "reconcile",
      "description": "Reconcile implementation drift by surgically updating the feature's own spec, plan, and tasks.",
      "author": "Stanislav Deviatov",
      "version": "1.0.0",
      "download_url": "https://github.com/stn1slv/spec-kit-reconcile/archive/refs/tags/v1.0.0.zip",
      "repository": "https://github.com/stn1slv/spec-kit-reconcile",
      "homepage": "https://github.com/stn1slv/spec-kit-reconcile",
      "documentation": "https://github.com/stn1slv/spec-kit-reconcile/blob/main/README.md",
      "changelog": "https://github.com/stn1slv/spec-kit-reconcile/blob/main/CHANGELOG.md",
      "license": "MIT",
      "requires": {
        "speckit_version": ">=0.1.0"
      },
      "provides": {
        "commands": 1,
        "hooks": 0
      },
      "tags": [
        "reconcile",
        "drift",
        "tasks",
        "remediation"
      ],
      "verified": false,
      "downloads": 0,
      "stars": 0,
      "created_at": "2026-03-14T00:00:00Z",
      "updated_at": "2026-03-14T00:00:00Z"
    },
    "retrospective": {
      "name": "Retrospective Extension",
      "id": "retrospective",
@@ -467,53 +249,13 @@
        "commands": 7,
        "hooks": 1
      },
-      "tags": [
+      "tags": ["code-review", "quality", "review", "testing", "error-handling", "type-design", "simplification"],
        "code-review",
        "quality",
        "review",
        "testing",
        "error-handling",
        "type-design",
        "simplification"
      ],
      "verified": false,
      "downloads": 0,
      "stars": 0,
      "created_at": "2026-03-06T00:00:00Z",
      "updated_at": "2026-03-06T00:00:00Z"
    },
    "speckit-utils": {
      "name": "SDD Utilities",
      "id": "speckit-utils",
      "description": "Resume interrupted workflows, validate project health, and verify spec-to-task traceability.",
      "author": "mvanhorn",
      "version": "1.0.0",
      "download_url": "https://github.com/mvanhorn/speckit-utils/archive/refs/tags/v1.0.0.zip",
      "repository": "https://github.com/mvanhorn/speckit-utils",
      "homepage": "https://github.com/mvanhorn/speckit-utils",
      "documentation": "https://github.com/mvanhorn/speckit-utils/blob/main/README.md",
      "changelog": "https://github.com/mvanhorn/speckit-utils/blob/main/CHANGELOG.md",
      "license": "MIT",
      "requires": {
        "speckit_version": ">=0.1.0"
      },
      "provides": {
        "commands": 3,
        "hooks": 2
      },
      "tags": [
        "resume",
        "doctor",
        "validate",
        "workflow",
        "health-check"
      ],
      "verified": false,
      "downloads": 0,
      "stars": 0,
      "created_at": "2026-03-18T00:00:00Z",
      "updated_at": "2026-03-18T00:00:00Z"
    },
    "sync": {
      "name": "Spec Sync",
      "id": "sync",
@@ -549,7 +291,7 @@
    "understanding": {
      "name": "Understanding",
      "id": "understanding",
-      "description": "Automated requirements quality analysis \u2014 validates specs against IEEE/ISO standards using 31 deterministic metrics. Catches ambiguity, missing testability, and structural issues before they reach implementation. Includes experimental energy-based ambiguity detection using local LM token perplexity.",
+      "description": "Automated requirements quality analysis — validates specs against IEEE/ISO standards using 31 deterministic metrics. Catches ambiguity, missing testability, and structural issues before they reach implementation. Includes experimental energy-based ambiguity detection using local LM token perplexity.",
      "author": "Ladislav Bihari",
      "version": "3.4.0",
      "download_url": "https://github.com/Testimonial/understanding/archive/refs/tags/v3.4.0.zip",
@@ -587,38 +329,6 @@
      "created_at": "2026-03-07T00:00:00Z",
      "updated_at": "2026-03-07T00:00:00Z"
    },
    "status": {
      "name": "Project Status",
      "id": "status",
      "description": "Show current SDD workflow progress — active feature, artifact status, task completion, workflow phase, and extensions summary.",
      "author": "KhawarHabibKhan",
      "version": "1.0.0",
      "download_url": "https://github.com/KhawarHabibKhan/spec-kit-status/archive/refs/tags/v1.0.0.zip",
      "repository": "https://github.com/KhawarHabibKhan/spec-kit-status",
      "homepage": "https://github.com/KhawarHabibKhan/spec-kit-status",
      "documentation": "https://github.com/KhawarHabibKhan/spec-kit-status/blob/main/README.md",
      "changelog": "https://github.com/KhawarHabibKhan/spec-kit-status/blob/main/CHANGELOG.md",
      "license": "MIT",
      "requires": {
        "speckit_version": ">=0.1.0"
      },
      "provides": {
        "commands": 1,
        "hooks": 0
      },
      "tags": [
        "status",
        "workflow",
        "progress",
        "feature-tracking",
        "task-progress"
      ],
      "verified": false,
      "downloads": 0,
      "stars": 0,
      "created_at": "2026-03-16T00:00:00Z",
      "updated_at": "2026-03-16T00:00:00Z"
    },
    "v-model": {
      "name": "V-Model Extension Pack",
      "id": "v-model",
@@ -651,37 +361,6 @@
      "created_at": "2026-02-20T00:00:00Z",
      "updated_at": "2026-02-22T00:00:00Z"
    },
    "learn": {
      "name": "Learning Extension",
      "id": "learn",
      "description": "Generate educational guides from implementations and enhance clarifications with mentoring context.",
      "author": "Vianca Martinez",
      "version": "1.0.0",
      "download_url": "https://github.com/imviancagrace/spec-kit-learn/archive/refs/tags/v1.0.0.zip",
      "repository": "https://github.com/imviancagrace/spec-kit-learn",
      "homepage": "https://github.com/imviancagrace/spec-kit-learn",
      "documentation": "https://github.com/imviancagrace/spec-kit-learn/blob/main/README.md",
      "changelog": "https://github.com/imviancagrace/spec-kit-learn/blob/main/CHANGELOG.md",
      "license": "MIT",
      "requires": {
        "speckit_version": ">=0.1.0"
      },
      "provides": {
        "commands": 2,
        "hooks": 1
      },
      "tags": [
        "learning",
        "education",
        "mentoring",
        "knowledge-transfer"
      ],
      "verified": false,
      "downloads": 0,
      "stars": 0,
      "created_at": "2026-03-17T00:00:00Z",
      "updated_at": "2026-03-17T00:00:00Z"
    },
    "verify": {
      "name": "Verify Extension",
      "id": "verify",
@@ -713,37 +392,6 @@
      "stars": 0,
      "created_at": "2026-03-03T00:00:00Z",
      "updated_at": "2026-03-03T00:00:00Z"
    },
    "verify-tasks": {
      "name": "Verify Tasks Extension",
      "id": "verify-tasks",
      "description": "Detect phantom completions: tasks marked [X] in tasks.md with no real implementation.",
      "author": "Dave Sharpe",
      "version": "1.0.0",
      "download_url": "https://github.com/datastone-inc/spec-kit-verify-tasks/archive/refs/tags/v1.0.0.zip",
      "repository": "https://github.com/datastone-inc/spec-kit-verify-tasks",
      "homepage": "https://github.com/datastone-inc/spec-kit-verify-tasks",
      "documentation": "https://github.com/datastone-inc/spec-kit-verify-tasks/blob/main/README.md",
      "changelog": "https://github.com/datastone-inc/spec-kit-verify-tasks/blob/main/CHANGELOG.md",
      "license": "MIT",
      "requires": {
        "speckit_version": ">=0.1.0"
      },
      "provides": {
        "commands": 1,
        "hooks": 1
      },
      "tags": [
        "verification",
        "quality",
        "phantom-completion",
        "tasks"
      ],
      "verified": false,
      "downloads": 0,
      "stars": 0,
      "created_at": "2026-03-16T00:00:00Z",
      "updated_at": "2026-03-16T00:00:00Z"
    }
  }
 }
--- a/presets/README.md
+++ b/presets/README.md
@@ -13,15 +13,13 @@ When Spec Kit needs a template (e.g. `spec-template`), it walks a resolution sta
 If no preset is installed, core templates are used — exactly the same behavior as before presets existed.
 Template resolution happens **at runtime** — although preset files are copied into `.specify/presets/<id>/` during installation, Spec Kit walks the resolution stack on every template lookup rather than merging templates into a single location.
 For detailed resolution and command registration flows, see [ARCHITECTURE.md](ARCHITECTURE.md).
 ## Command Overrides
 Presets can also override the commands that guide the SDD workflow. Templates define *what* gets produced (specs, plans, constitutions); commands define *how* the LLM produces them (the step-by-step instructions).
-Unlike templates, command overrides are applied **at install time**. When a preset includes `type: "command"` entries, the commands are registered into all detected agent directories (`.claude/commands/`, `.gemini/commands/`, etc.) in the correct format (Markdown or TOML with appropriate argument placeholders). When the preset is removed, the registered commands are cleaned up.
+When a preset includes `type: "command"` entries, the commands are automatically registered into all detected agent directories (`.claude/commands/`, `.gemini/commands/`, etc.) in the correct format (Markdown or TOML with appropriate argument placeholders). When the preset is removed, the registered commands are cleaned up.
 ## Quick Start
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -1,6 +1,6 @@
 [project]
 name = "specify-cli"
-version = "0.3.2"
+version = "0.3.0"
 description = "Specify CLI, part of GitHub Spec Kit. A tool to bootstrap your projects for Spec-Driven Development (SDD)."
 requires-python = ">=3.11"
 dependencies = [
@@ -14,7 +14,6 @@ dependencies = [
    "pyyaml>=6.0",
    "packaging>=23.0",
    "pathspec>=0.12.0",
    "json5>=0.13.0",
 ]
 [project.scripts]
@@ -27,25 +26,6 @@ build-backend = "hatchling.build"
 [tool.hatch.build.targets.wheel]
 packages = ["src/specify_cli"]
 [tool.hatch.build.targets.wheel.force-include]
 # Bundle core assets so `specify init` works without network access (air-gapped / enterprise)
 # Page templates (exclude commands/ — bundled separately below to avoid duplication)
 "templates/agent-file-template.md" = "specify_cli/core_pack/templates/agent-file-template.md"
 "templates/checklist-template.md" = "specify_cli/core_pack/templates/checklist-template.md"
 "templates/constitution-template.md" = "specify_cli/core_pack/templates/constitution-template.md"
 "templates/plan-template.md" = "specify_cli/core_pack/templates/plan-template.md"
 "templates/spec-template.md" = "specify_cli/core_pack/templates/spec-template.md"
 "templates/tasks-template.md" = "specify_cli/core_pack/templates/tasks-template.md"
 "templates/vscode-settings.json" = "specify_cli/core_pack/templates/vscode-settings.json"
 # Command templates
 "templates/commands" = "specify_cli/core_pack/commands"
 "scripts/bash" = "specify_cli/core_pack/scripts/bash"
 "scripts/powershell" = "specify_cli/core_pack/scripts/powershell"
 ".github/workflows/scripts/create-release-packages.sh" = "specify_cli/core_pack/release_scripts/create-release-packages.sh"
 ".github/workflows/scripts/create-release-packages.ps1" = "specify_cli/core_pack/release_scripts/create-release-packages.ps1"
 # Official agent packs (embedded in wheel for zero-config offline operation)
 "src/specify_cli/core_pack/agents" = "specify_cli/core_pack/agents"
 [project.optional-dependencies]
 test = [
    "pytest>=7.0",
--- a/scripts/bash/check-prerequisites.sh
+++ b/scripts/bash/check-prerequisites.sh
@@ -168,7 +168,7 @@ if $JSON_MODE; then
        if [[ ${#docs[@]} -eq 0 ]]; then
            json_docs="[]"
        else
-            json_docs=$(for d in "${docs[@]}"; do printf '"%s",' "$(json_escape "$d")"; done)
+            json_docs=$(printf '"%s",' "${docs[@]}")
            json_docs="[${json_docs%,}]"
        fi
        printf '{"FEATURE_DIR":"%s","AVAILABLE_DOCS":%s}\n' "$(json_escape "$FEATURE_DIR")" "$json_docs"
--- a/scripts/bash/common.sh
+++ b/scripts/bash/common.sh
@@ -33,27 +33,16 @@ get_current_branch() {
    if [[ -d "$specs_dir" ]]; then
        local latest_feature=""
        local highest=0
        local latest_timestamp=""
        for dir in "$specs_dir"/*; do
            if [[ -d "$dir" ]]; then
                local dirname=$(basename "$dir")
-                if [[ "$dirname" =~ ^([0-9]{8}-[0-9]{6})- ]]; then
+                if [[ "$dirname" =~ ^([0-9]{3})- ]]; then
                    # Timestamp-based branch: compare lexicographically
                    local ts="${BASH_REMATCH[1]}"
                    if [[ "$ts" > "$latest_timestamp" ]]; then
                        latest_timestamp="$ts"
                        latest_feature=$dirname
                    fi
                elif [[ "$dirname" =~ ^([0-9]{3})- ]]; then
                    local number=${BASH_REMATCH[1]}
                    number=$((10#$number))
                    if [[ "$number" -gt "$highest" ]]; then
                        highest=$number
-                        # Only update if no timestamp branch found yet
+                        latest_feature=$dirname
                        if [[ -z "$latest_timestamp" ]]; then
                            latest_feature=$dirname
                        fi
                    fi
                fi
            fi
@@ -83,9 +72,9 @@ check_feature_branch() {
        return 0
    fi
-    if [[ ! "$branch" =~ ^[0-9]{3}- ]] && [[ ! "$branch" =~ ^[0-9]{8}-[0-9]{6}- ]]; then
+    if [[ ! "$branch" =~ ^[0-9]{3}- ]]; then
        echo "ERROR: Not on a feature branch. Current branch: $branch" >&2
-        echo "Feature branches should be named like: 001-feature-name or 20260319-143022-feature-name" >&2
+        echo "Feature branches should be named like: 001-feature-name" >&2
        return 1
    fi
@@ -101,18 +90,15 @@ find_feature_dir_by_prefix() {
    local branch_name="$2"
    local specs_dir="$repo_root/specs"
-    # Extract prefix from branch (e.g., "004" from "004-whatever" or "20260319-143022" from timestamp branches)
+    # Extract numeric prefix from branch (e.g., "004" from "004-whatever")
-    local prefix=""
+    if [[ ! "$branch_name" =~ ^([0-9]{3})- ]]; then
-    if [[ "$branch_name" =~ ^([0-9]{8}-[0-9]{6})- ]]; then
+        # If branch doesn't have numeric prefix, fall back to exact match
        prefix="${BASH_REMATCH[1]}"
    elif [[ "$branch_name" =~ ^([0-9]{3})- ]]; then
        prefix="${BASH_REMATCH[1]}"
    else
        # If branch doesn't have a recognized prefix, fall back to exact match
        echo "$specs_dir/$branch_name"
        return
    fi
    local prefix="${BASH_REMATCH[1]}"
    # Search for directories in specs/ that start with this prefix
    local matches=()
    if [[ -d "$specs_dir" ]]; then
@@ -133,7 +119,7 @@ find_feature_dir_by_prefix() {
    else
        # Multiple matches - this shouldn't happen with proper naming convention
        echo "ERROR: Multiple spec directories found with prefix '$prefix': ${matches[*]}" >&2
-        echo "Please ensure only one spec directory exists per prefix." >&2
+        echo "Please ensure only one spec directory exists per numeric prefix." >&2
        return 1
    fi
 }
@@ -175,7 +161,7 @@ has_jq() {
 }
 # Escape a string for safe embedding in a JSON value (fallback when jq is unavailable).
-# Handles backslash, double-quote, and JSON-required control character escapes (RFC 8259).
+# Handles backslash, double-quote, and control characters (newline, tab, carriage return).
 json_escape() {
    local s="$1"
    s="${s//\\/\\\\}"
@@ -183,23 +169,7 @@ json_escape() {
    s="${s//$'\n'/\\n}"
    s="${s//$'\t'/\\t}"
    s="${s//$'\r'/\\r}"
-    s="${s//$'\b'/\\b}"
+    printf '%s' "$s"
    s="${s//$'\f'/\\f}"
    # Escape any remaining U+0001-U+001F control characters as \uXXXX.
    # (U+0000/NUL cannot appear in bash strings and is excluded.)
    # LC_ALL=C ensures ${#s} counts bytes and ${s:$i:1} yields single bytes,
    # so multi-byte UTF-8 sequences (first byte >= 0xC0) pass through intact.
    local LC_ALL=C
    local i char code
    for (( i=0; i<${#s}; i++ )); do
        char="${s:$i:1}"
        printf -v code '%d' "'$char" 2>/dev/null || code=256
        if (( code >= 1 && code <= 31 )); then
            printf '\\u%04x' "$code"
        else
            printf '%s' "$char"
        fi
    done
 }
 check_file() { [[ -f "$1" ]] && echo "  ✓ $2" || echo "  ✗ $2"; }
@@ -224,11 +194,9 @@ resolve_template() {
    if [ -d "$presets_dir" ]; then
        local registry_file="$presets_dir/.registry"
        if [ -f "$registry_file" ] && command -v python3 >/dev/null 2>&1; then
-            # Read preset IDs sorted by priority (lower number = higher precedence).
+            # Read preset IDs sorted by priority (lower number = higher precedence)
-            # The python3 call is wrapped in an if-condition so that set -e does not
+            local sorted_presets
-            # abort the function when python3 exits non-zero (e.g. invalid JSON).
+            sorted_presets=$(SPECKIT_REGISTRY="$registry_file" python3 -c "
            local sorted_presets=""
            if sorted_presets=$(SPECKIT_REGISTRY="$registry_file" python3 -c "
 import json, sys, os
 try:
    with open(os.environ['SPECKIT_REGISTRY']) as f:
@@ -238,17 +206,14 @@ try:
        print(pid)
 except Exception:
    sys.exit(1)
-" 2>/dev/null); then
+" 2>/dev/null)
-                if [ -n "$sorted_presets" ]; then
+            if [ $? -eq 0 ] && [ -n "$sorted_presets" ]; then
-                    # python3 succeeded and returned preset IDs — search in priority order
+                while IFS= read -r preset_id; do
-                    while IFS= read -r preset_id; do
+                    local candidate="$presets_dir/$preset_id/templates/${template_name}.md"
-                        local candidate="$presets_dir/$preset_id/templates/${template_name}.md"
+                    [ -f "$candidate" ] && echo "$candidate" && return 0
-                        [ -f "$candidate" ] && echo "$candidate" && return 0
+                done <<< "$sorted_presets"
                    done <<< "$sorted_presets"
                fi
                # python3 succeeded but registry has no presets — nothing to search
            else
-                # python3 failed (missing, or registry parse error) — fall back to unordered directory scan
+                # python3 returned empty list — fall through to directory scan
                for preset in "$presets_dir"/*/; do
                    [ -d "$preset" ] || continue
                    local candidate="$preset/templates/${template_name}.md"
@@ -281,9 +246,8 @@ except Exception:
    local core="$base/${template_name}.md"
    [ -f "$core" ] && echo "$core" && return 0
-    # Template not found in any location.
+    # Return success with empty output so callers using set -e don't abort;
-    # Return 1 so callers can distinguish "not found" from "found".
+    # callers check [ -n "$TEMPLATE" ] to detect "not found".
-    # Callers running under set -e should use: TEMPLATE=$(resolve_template ...) || true
+    return 0
    return 1
 }
--- a/scripts/bash/create-new-feature.sh
+++ b/scripts/bash/create-new-feature.sh
@@ -5,7 +5,6 @@ set -e
 JSON_MODE=false
 SHORT_NAME=""
 BRANCH_NUMBER=""
 USE_TIMESTAMP=false
 ARGS=()
 i=1
 while [ $i -le $# ]; do
@@ -41,23 +40,18 @@ while [ $i -le $# ]; do
            fi
            BRANCH_NUMBER="$next_arg"
            ;;
        --timestamp)
            USE_TIMESTAMP=true
            ;;
        --help|-h) 
-            echo "Usage: $0 [--json] [--short-name <name>] [--number N] [--timestamp] <feature_description>"
+            echo "Usage: $0 [--json] [--short-name <name>] [--number N] <feature_description>"
            echo ""
            echo "Options:"
            echo "  --json              Output in JSON format"
            echo "  --short-name <name> Provide a custom short name (2-4 words) for the branch"
            echo "  --number N          Specify branch number manually (overrides auto-detection)"
            echo "  --timestamp         Use timestamp prefix (YYYYMMDD-HHMMSS) instead of sequential numbering"
            echo "  --help, -h          Show this help message"
            echo ""
            echo "Examples:"
            echo "  $0 'Add user authentication system' --short-name 'user-auth'"
            echo "  $0 'Implement OAuth2 integration for API' --number 5"
            echo "  $0 --timestamp --short-name 'user-auth' 'Add user authentication'"
            exit 0
            ;;
        *) 
@@ -69,7 +63,7 @@ done
 FEATURE_DESCRIPTION="${ARGS[*]}"
 if [ -z "$FEATURE_DESCRIPTION" ]; then
-    echo "Usage: $0 [--json] [--short-name <name>] [--number N] [--timestamp] <feature_description>" >&2
+    echo "Usage: $0 [--json] [--short-name <name>] [--number N] <feature_description>" >&2
    exit 1
 fi
@@ -102,13 +96,10 @@ get_highest_from_specs() {
        for dir in "$specs_dir"/*; do
            [ -d "$dir" ] || continue
            dirname=$(basename "$dir")
-            # Only match sequential prefixes (###-*), skip timestamp dirs
+            number=$(echo "$dirname" | grep -o '^[0-9]\+' || echo "0")
-            if echo "$dirname" | grep -q '^[0-9]\{3\}-'; then
+            number=$((10#$number))
-                number=$(echo "$dirname" | grep -o '^[0-9]\{3\}')
+            if [ "$number" -gt "$highest" ]; then
-                number=$((10#$number))
+                highest=$number
                if [ "$number" -gt "$highest" ]; then
                    highest=$number
                fi
            fi
        done
    fi
@@ -147,7 +138,7 @@ check_existing_branches() {
    local specs_dir="$1"
    # Fetch all remotes to get latest branch info (suppress errors if no remotes)
-    git fetch --all --prune >/dev/null 2>&1 || true
+    git fetch --all --prune 2>/dev/null || true
    # Get highest number from ALL branches (not just matching short name)
    local highest_branch=$(get_highest_from_branches)
@@ -171,6 +162,17 @@ clean_branch_name() {
    echo "$name" | tr '[:upper:]' '[:lower:]' | sed 's/[^a-z0-9]/-/g' | sed 's/-\+/-/g' | sed 's/^-//' | sed 's/-$//'
 }
 # Escape a string for safe embedding in a JSON value (fallback when jq is unavailable).
 json_escape() {
    local s="$1"
    s="${s//\\/\\\\}"
    s="${s//\"/\\\"}"
    s="${s//$'\n'/\\n}"
    s="${s//$'\t'/\\t}"
    s="${s//$'\r'/\\r}"
    printf '%s' "$s"
 }
 # Resolve repository root. Prefer git information when available, but fall back
 # to searching for repository markers so the workflow still functions in repositories that
 # were initialised with --no-git.
@@ -251,42 +253,29 @@ else
    BRANCH_SUFFIX=$(generate_branch_name "$FEATURE_DESCRIPTION")
 fi
-# Warn if --number and --timestamp are both specified
+# Determine branch number
-if [ "$USE_TIMESTAMP" = true ] && [ -n "$BRANCH_NUMBER" ]; then
+if [ -z "$BRANCH_NUMBER" ]; then
-    >&2 echo "[specify] Warning: --number is ignored when --timestamp is used"
+    if [ "$HAS_GIT" = true ]; then
-    BRANCH_NUMBER=""
+        # Check existing branches on remotes
-fi
+        BRANCH_NUMBER=$(check_existing_branches "$SPECS_DIR")
-
+    else
-# Determine branch prefix
+        # Fall back to local directory check
-if [ "$USE_TIMESTAMP" = true ]; then
+        HIGHEST=$(get_highest_from_specs "$SPECS_DIR")
-    FEATURE_NUM=$(date +%Y%m%d-%H%M%S)
+        BRANCH_NUMBER=$((HIGHEST + 1))
    BRANCH_NAME="${FEATURE_NUM}-${BRANCH_SUFFIX}"
 else
    # Determine branch number
    if [ -z "$BRANCH_NUMBER" ]; then
        if [ "$HAS_GIT" = true ]; then
            # Check existing branches on remotes
            BRANCH_NUMBER=$(check_existing_branches "$SPECS_DIR")
        else
            # Fall back to local directory check
            HIGHEST=$(get_highest_from_specs "$SPECS_DIR")
            BRANCH_NUMBER=$((HIGHEST + 1))
        fi
    fi
    # Force base-10 interpretation to prevent octal conversion (e.g., 010 → 8 in octal, but should be 10 in decimal)
    FEATURE_NUM=$(printf "%03d" "$((10#$BRANCH_NUMBER))")
    BRANCH_NAME="${FEATURE_NUM}-${BRANCH_SUFFIX}"
 fi
 # Force base-10 interpretation to prevent octal conversion (e.g., 010 → 8 in octal, but should be 10 in decimal)
 FEATURE_NUM=$(printf "%03d" "$((10#$BRANCH_NUMBER))")
 BRANCH_NAME="${FEATURE_NUM}-${BRANCH_SUFFIX}"
 # GitHub enforces a 244-byte limit on branch names
 # Validate and truncate if necessary
 MAX_BRANCH_LENGTH=244
 if [ ${#BRANCH_NAME} -gt $MAX_BRANCH_LENGTH ]; then
    # Calculate how much we need to trim from suffix
-    # Account for prefix length: timestamp (15) + hyphen (1) = 16, or sequential (3) + hyphen (1) = 4
+    # Account for: feature number (3) + hyphen (1) = 4 chars
-    PREFIX_LENGTH=$(( ${#FEATURE_NUM} + 1 ))
+    MAX_SUFFIX_LENGTH=$((MAX_BRANCH_LENGTH - 4))
    MAX_SUFFIX_LENGTH=$((MAX_BRANCH_LENGTH - PREFIX_LENGTH))
    # Truncate suffix at word boundary if possible
    TRUNCATED_SUFFIX=$(echo "$BRANCH_SUFFIX" | cut -c1-$MAX_SUFFIX_LENGTH)
@@ -305,11 +294,7 @@ if [ "$HAS_GIT" = true ]; then
    if ! git checkout -b "$BRANCH_NAME" 2>/dev/null; then
        # Check if branch already exists
        if git branch --list "$BRANCH_NAME" | grep -q .; then
-            if [ "$USE_TIMESTAMP" = true ]; then
+            >&2 echo "Error: Branch '$BRANCH_NAME' already exists. Please use a different feature name or specify a different number with --number."
                >&2 echo "Error: Branch '$BRANCH_NAME' already exists. Rerun to get a new timestamp or use a different --short-name."
            else
                >&2 echo "Error: Branch '$BRANCH_NAME' already exists. Please use a different feature name or specify a different number with --number."
            fi
            exit 1
        else
            >&2 echo "Error: Failed to create git branch '$BRANCH_NAME'. Please check your git configuration and try again."
@@ -323,14 +308,9 @@ fi
 FEATURE_DIR="$SPECS_DIR/$BRANCH_NAME"
 mkdir -p "$FEATURE_DIR"
-TEMPLATE=$(resolve_template "spec-template" "$REPO_ROOT") || true
+TEMPLATE=$(resolve_template "spec-template" "$REPO_ROOT")
 SPEC_FILE="$FEATURE_DIR/spec.md"
-if [ -n "$TEMPLATE" ] && [ -f "$TEMPLATE" ]; then
+if [ -n "$TEMPLATE" ] && [ -f "$TEMPLATE" ]; then cp "$TEMPLATE" "$SPEC_FILE"; else touch "$SPEC_FILE"; fi
    cp "$TEMPLATE" "$SPEC_FILE"
 else
    echo "Warning: Spec template not found; created empty spec file" >&2
    touch "$SPEC_FILE"
 fi
 # Inform the user how to persist the feature variable in their own shell
 printf '# To persist: export SPECIFY_FEATURE=%q\n' "$BRANCH_NAME" >&2
--- a/scripts/bash/setup-plan.sh
+++ b/scripts/bash/setup-plan.sh
@@ -39,7 +39,7 @@ check_feature_branch "$CURRENT_BRANCH" "$HAS_GIT" || exit 1
 mkdir -p "$FEATURE_DIR"
 # Copy plan template if it exists
-TEMPLATE=$(resolve_template "plan-template" "$REPO_ROOT") || true
+TEMPLATE=$(resolve_template "plan-template" "$REPO_ROOT")
 if [[ -n "$TEMPLATE" ]] && [[ -f "$TEMPLATE" ]]; then
    cp "$TEMPLATE" "$IMPL_PLAN"
    echo "Copied plan template to $IMPL_PLAN"
--- a/scripts/bash/update-agent-context.sh
+++ b/scripts/bash/update-agent-context.sh
@@ -30,12 +30,12 @@
 #
 # 5. Multi-Agent Support
 #    - Handles agent-specific file paths and naming conventions
-#    - Supports: Claude, Gemini, Copilot, Cursor, Qwen, opencode, Codex, Windsurf, Junie, Kilo Code, Auggie CLI, Roo Code, CodeBuddy CLI, Qoder CLI, Amp, SHAI, Tabnine CLI, Kiro CLI, Mistral Vibe, Kimi Code, Pi Coding Agent, iFlow CLI, Antigravity or Generic
+#    - Supports: Claude, Gemini, Copilot, Cursor, Qwen, opencode, Codex, Windsurf, Kilo Code, Auggie CLI, Roo Code, CodeBuddy CLI, Qoder CLI, Amp, SHAI, Tabnine CLI, Kiro CLI, Mistral Vibe, Kimi Code, Antigravity or Generic
 #    - Can update single agents or all existing agent files
 #    - Creates default Claude file if no agent files exist
 #
 # Usage: ./update-agent-context.sh [agent_type]
-# Agent types: claude|gemini|copilot|cursor-agent|qwen|opencode|codex|windsurf|junie|kilocode|auggie|roo|codebuddy|amp|shai|tabnine|kiro-cli|agy|bob|vibe|qodercli|kimi|trae|pi|iflow|generic
+# Agent types: claude|gemini|copilot|cursor-agent|qwen|opencode|codex|windsurf|kilocode|auggie|roo|codebuddy|amp|shai|tabnine|kiro-cli|agy|bob|vibe|qodercli|kimi|generic
 # Leave empty to update all existing agent files
 set -e
@@ -68,13 +68,12 @@ CURSOR_FILE="$REPO_ROOT/.cursor/rules/specify-rules.mdc"
 QWEN_FILE="$REPO_ROOT/QWEN.md"
 AGENTS_FILE="$REPO_ROOT/AGENTS.md"
 WINDSURF_FILE="$REPO_ROOT/.windsurf/rules/specify-rules.md"
 JUNIE_FILE="$REPO_ROOT/.junie/AGENTS.md"
 KILOCODE_FILE="$REPO_ROOT/.kilocode/rules/specify-rules.md"
 AUGGIE_FILE="$REPO_ROOT/.augment/rules/specify-rules.md"
 ROO_FILE="$REPO_ROOT/.roo/rules/specify-rules.md"
 CODEBUDDY_FILE="$REPO_ROOT/CODEBUDDY.md"
 QODER_FILE="$REPO_ROOT/QODER.md"
-# Amp, Kiro CLI, IBM Bob, and Pi all share AGENTS.md — use AGENTS_FILE to avoid
+# AMP, Kiro CLI, and IBM Bob all share AGENTS.md — use AGENTS_FILE to avoid
 # updating the same file multiple times.
 AMP_FILE="$AGENTS_FILE"
 SHAI_FILE="$REPO_ROOT/SHAI.md"
@@ -84,8 +83,6 @@ AGY_FILE="$REPO_ROOT/.agent/rules/specify-rules.md"
 BOB_FILE="$AGENTS_FILE"
 VIBE_FILE="$REPO_ROOT/.vibe/agents/specify-agents.md"
 KIMI_FILE="$REPO_ROOT/KIMI.md"
 TRAE_FILE="$REPO_ROOT/.trae/rules/AGENTS.md"
 IFLOW_FILE="$REPO_ROOT/IFLOW.md"
 # Template file
 TEMPLATE_FILE="$REPO_ROOT/.specify/templates/agent-file-template.md"
@@ -639,9 +636,6 @@ update_specific_agent() {
        windsurf)
            update_agent_file "$WINDSURF_FILE" "Windsurf" || return 1
            ;;
        junie)
            update_agent_file "$JUNIE_FILE" "Junie" || return 1
            ;;
        kilocode)
            update_agent_file "$KILOCODE_FILE" "Kilo Code" || return 1
            ;;
@@ -681,90 +675,67 @@ update_specific_agent() {
        kimi)
            update_agent_file "$KIMI_FILE" "Kimi Code" || return 1
            ;;
        trae)
            update_agent_file "$TRAE_FILE" "Trae" || return 1
            ;;
        pi)
            update_agent_file "$AGENTS_FILE" "Pi Coding Agent" || return 1
            ;;
        iflow)
            update_agent_file "$IFLOW_FILE" "iFlow CLI" || return 1
            ;;
        generic)
            log_info "Generic agent: no predefined context file. Use the agent-specific update script for your agent."
            ;;
        *)
            log_error "Unknown agent type '$agent_type'"
-            log_error "Expected: claude|gemini|copilot|cursor-agent|qwen|opencode|codex|windsurf|junie|kilocode|auggie|roo|codebuddy|amp|shai|tabnine|kiro-cli|agy|bob|vibe|qodercli|kimi|trae|pi|iflow|generic"
+            log_error "Expected: claude|gemini|copilot|cursor-agent|qwen|opencode|codex|windsurf|kilocode|auggie|roo|codebuddy|amp|shai|tabnine|kiro-cli|agy|bob|vibe|qodercli|kimi|generic"
            exit 1
            ;;
    esac
 }
 # Helper: skip non-existent files and files already updated (dedup by
 # realpath so that variables pointing to the same file — e.g. AMP_FILE,
 # KIRO_FILE, BOB_FILE all resolving to AGENTS_FILE — are only written once).
 # Uses a linear array instead of associative array for bash 3.2 compatibility.
 # Note: defined at top level because bash 3.2 does not support true
 # nested/local functions. _updated_paths, _found_agent, and _all_ok are
 # initialised exclusively inside update_all_existing_agents so that
 # sourcing this script has no side effects on the caller's environment.
 _update_if_new() {
    local file="$1" name="$2"
    [[ -f "$file" ]] || return 0
    local real_path
    real_path=$(realpath "$file" 2>/dev/null || echo "$file")
    local p
    if [[ ${#_updated_paths[@]} -gt 0 ]]; then
        for p in "${_updated_paths[@]}"; do
            [[ "$p" == "$real_path" ]] && return 0
        done
    fi
    # Record the file as seen before attempting the update so that:
    # (a) aliases pointing to the same path are not retried on failure
    # (b) _found_agent reflects file existence, not update success
    _updated_paths+=("$real_path")
    _found_agent=true
    update_agent_file "$file" "$name"
 }
 update_all_existing_agents() {
-    _found_agent=false
+    local found_agent=false
-    _updated_paths=()
+    local _updated_paths=()
    local _all_ok=true
-    _update_if_new "$CLAUDE_FILE" "Claude Code"           || _all_ok=false
+    # Helper: skip non-existent files and files already updated (dedup by
-    _update_if_new "$GEMINI_FILE" "Gemini CLI"             || _all_ok=false
+    # realpath so that variables pointing to the same file — e.g. AMP_FILE,
-    _update_if_new "$COPILOT_FILE" "GitHub Copilot"        || _all_ok=false
+    # KIRO_FILE, BOB_FILE all resolving to AGENTS_FILE — are only written once).
-    _update_if_new "$CURSOR_FILE" "Cursor IDE"             || _all_ok=false
+    # Uses a linear array instead of associative array for bash 3.2 compatibility.
-    _update_if_new "$QWEN_FILE" "Qwen Code"                || _all_ok=false
+    update_if_new() {
-    _update_if_new "$AGENTS_FILE" "Codex/opencode"         || _all_ok=false
+        local file="$1" name="$2"
-    _update_if_new "$AMP_FILE" "Amp"                       || _all_ok=false
+        [[ -f "$file" ]] || return 0
-    _update_if_new "$KIRO_FILE" "Kiro CLI"                 || _all_ok=false
+        local real_path
-    _update_if_new "$BOB_FILE" "IBM Bob"                   || _all_ok=false
+        real_path=$(realpath "$file" 2>/dev/null || echo "$file")
-    _update_if_new "$WINDSURF_FILE" "Windsurf"             || _all_ok=false
+        local p
-    _update_if_new "$JUNIE_FILE" "Junie"                || _all_ok=false
+        if [[ ${#_updated_paths[@]} -gt 0 ]]; then
-    _update_if_new "$KILOCODE_FILE" "Kilo Code"            || _all_ok=false
+            for p in "${_updated_paths[@]}"; do
-    _update_if_new "$AUGGIE_FILE" "Auggie CLI"             || _all_ok=false
+                [[ "$p" == "$real_path" ]] && return 0
-    _update_if_new "$ROO_FILE" "Roo Code"                  || _all_ok=false
+            done
-    _update_if_new "$CODEBUDDY_FILE" "CodeBuddy CLI"       || _all_ok=false
+        fi
-    _update_if_new "$SHAI_FILE" "SHAI"                     || _all_ok=false
+        update_agent_file "$file" "$name" || return 1
-    _update_if_new "$TABNINE_FILE" "Tabnine CLI"           || _all_ok=false
+        _updated_paths+=("$real_path")
-    _update_if_new "$QODER_FILE" "Qoder CLI"               || _all_ok=false
+        found_agent=true
-    _update_if_new "$AGY_FILE" "Antigravity"               || _all_ok=false
+    }
-    _update_if_new "$VIBE_FILE" "Mistral Vibe"             || _all_ok=false
+
-    _update_if_new "$KIMI_FILE" "Kimi Code"                || _all_ok=false
+    update_if_new "$CLAUDE_FILE" "Claude Code"
-    _update_if_new "$TRAE_FILE" "Trae"                     || _all_ok=false
+    update_if_new "$GEMINI_FILE" "Gemini CLI"
-    _update_if_new "$IFLOW_FILE" "iFlow CLI"               || _all_ok=false
+    update_if_new "$COPILOT_FILE" "GitHub Copilot"
    update_if_new "$CURSOR_FILE" "Cursor IDE"
    update_if_new "$QWEN_FILE" "Qwen Code"
    update_if_new "$AGENTS_FILE" "Codex/opencode"
    update_if_new "$AMP_FILE" "Amp"
    update_if_new "$KIRO_FILE" "Kiro CLI"
    update_if_new "$BOB_FILE" "IBM Bob"
    update_if_new "$WINDSURF_FILE" "Windsurf"
    update_if_new "$KILOCODE_FILE" "Kilo Code"
    update_if_new "$AUGGIE_FILE" "Auggie CLI"
    update_if_new "$ROO_FILE" "Roo Code"
    update_if_new "$CODEBUDDY_FILE" "CodeBuddy CLI"
    update_if_new "$SHAI_FILE" "SHAI"
    update_if_new "$TABNINE_FILE" "Tabnine CLI"
    update_if_new "$QODER_FILE" "Qoder CLI"
    update_if_new "$AGY_FILE" "Antigravity"
    update_if_new "$VIBE_FILE" "Mistral Vibe"
    update_if_new "$KIMI_FILE" "Kimi Code"
    # If no agent files exist, create a default Claude file
-    if [[ "$_found_agent" == false ]]; then
+    if [[ "$found_agent" == false ]]; then
        log_info "No existing agent files found, creating default Claude file..."
        update_agent_file "$CLAUDE_FILE" "Claude Code" || return 1
    fi
    [[ "$_all_ok" == true ]]
 }
 print_summary() {
    echo
@@ -783,7 +754,7 @@ print_summary() {
    fi
    echo
-    log_info "Usage: $0 [claude|gemini|copilot|cursor-agent|qwen|opencode|codex|windsurf|junie|kilocode|auggie|roo|codebuddy|amp|shai|tabnine|kiro-cli|agy|bob|vibe|qodercli|kimi|trae|pi|iflow|generic]"
+    log_info "Usage: $0 [claude|gemini|copilot|cursor-agent|qwen|opencode|codex|windsurf|kilocode|auggie|roo|codebuddy|amp|shai|tabnine|kiro-cli|agy|bob|vibe|qodercli|kimi|generic]"
 }
 #==============================================================================
--- a/scripts/powershell/common.ps1
+++ b/scripts/powershell/common.ps1
@@ -38,24 +38,13 @@ function Get-CurrentBranch {
    if (Test-Path $specsDir) {
        $latestFeature = ""
        $highest = 0
        $latestTimestamp = ""
        Get-ChildItem -Path $specsDir -Directory | ForEach-Object {
-            if ($_.Name -match '^(\d{8}-\d{6})-') {
+            if ($_.Name -match '^(\d{3})-') {
                # Timestamp-based branch: compare lexicographically
                $ts = $matches[1]
                if ($ts -gt $latestTimestamp) {
                    $latestTimestamp = $ts
                    $latestFeature = $_.Name
                }
            } elseif ($_.Name -match '^(\d{3})-') {
                $num = [int]$matches[1]
                if ($num -gt $highest) {
                    $highest = $num
-                    # Only update if no timestamp branch found yet
+                    $latestFeature = $_.Name
                    if (-not $latestTimestamp) {
                        $latestFeature = $_.Name
                    }
                }
            }
        }
@@ -90,9 +79,9 @@ function Test-FeatureBranch {
        return $true
    }
-    if ($Branch -notmatch '^[0-9]{3}-' -and $Branch -notmatch '^\d{8}-\d{6}-') {
+    if ($Branch -notmatch '^[0-9]{3}-') {
        Write-Output "ERROR: Not on a feature branch. Current branch: $Branch"
-        Write-Output "Feature branches should be named like: 001-feature-name or 20260319-143022-feature-name"
+        Write-Output "Feature branches should be named like: 001-feature-name"
        return $false
    }
    return $true
--- a/scripts/powershell/create-new-feature.ps1
+++ b/scripts/powershell/create-new-feature.ps1
@@ -4,36 +4,32 @@
 param(
    [switch]$Json,
    [string]$ShortName,
    [Parameter()]
    [int]$Number = 0,
    [switch]$Timestamp,
    [switch]$Help,
-    [Parameter(Position = 0, ValueFromRemainingArguments = $true)]
+    [Parameter(ValueFromRemainingArguments = $true)]
    [string[]]$FeatureDescription
 )
 $ErrorActionPreference = 'Stop'
 # Show help if requested
 if ($Help) {
-    Write-Host "Usage: ./create-new-feature.ps1 [-Json] [-ShortName <name>] [-Number N] [-Timestamp] <feature description>"
+    Write-Host "Usage: ./create-new-feature.ps1 [-Json] [-ShortName <name>] [-Number N] <feature description>"
    Write-Host ""
    Write-Host "Options:"
    Write-Host "  -Json               Output in JSON format"
    Write-Host "  -ShortName <name>   Provide a custom short name (2-4 words) for the branch"
    Write-Host "  -Number N           Specify branch number manually (overrides auto-detection)"
    Write-Host "  -Timestamp          Use timestamp prefix (YYYYMMDD-HHMMSS) instead of sequential numbering"
    Write-Host "  -Help               Show this help message"
    Write-Host ""
    Write-Host "Examples:"
    Write-Host "  ./create-new-feature.ps1 'Add user authentication system' -ShortName 'user-auth'"
    Write-Host "  ./create-new-feature.ps1 'Implement OAuth2 integration for API'"
    Write-Host "  ./create-new-feature.ps1 -Timestamp -ShortName 'user-auth' 'Add user authentication'"
    exit 0
 }
 # Check if feature description provided
 if (-not $FeatureDescription -or $FeatureDescription.Count -eq 0) {
-    Write-Error "Usage: ./create-new-feature.ps1 [-Json] [-ShortName <name>] [-Number N] [-Timestamp] <feature description>"
+    Write-Error "Usage: ./create-new-feature.ps1 [-Json] [-ShortName <name>] <feature description>"
    exit 1
 }
@@ -75,7 +71,7 @@ function Get-HighestNumberFromSpecs {
    $highest = 0
    if (Test-Path $SpecsDir) {
        Get-ChildItem -Path $SpecsDir -Directory | ForEach-Object {
-            if ($_.Name -match '^(\d{3})-') {
+            if ($_.Name -match '^(\d+)') {
                $num = [int]$matches[1]
                if ($num -gt $highest) { $highest = $num }
            }
@@ -96,7 +92,7 @@ function Get-HighestNumberFromBranches {
                $cleanBranch = $branch.Trim() -replace '^\*?\s+', '' -replace '^remotes/[^/]+/', ''
                # Extract feature number if branch matches pattern ###-*
-                if ($cleanBranch -match '^(\d{3})-') {
+                if ($cleanBranch -match '^(\d+)-') {
                    $num = [int]$matches[1]
                    if ($num -gt $highest) { $highest = $num }
                }
@@ -219,40 +215,27 @@ if ($ShortName) {
    $branchSuffix = Get-BranchName -Description $featureDesc
 }
-# Warn if -Number and -Timestamp are both specified
+# Determine branch number
-if ($Timestamp -and $Number -ne 0) {
+if ($Number -eq 0) {
-    Write-Warning "[specify] Warning: -Number is ignored when -Timestamp is used"
+    if ($hasGit) {
-    $Number = 0
+        # Check existing branches on remotes
-}
+        $Number = Get-NextBranchNumber -SpecsDir $specsDir
-
+    } else {
-# Determine branch prefix
+        # Fall back to local directory check
-if ($Timestamp) {
+        $Number = (Get-HighestNumberFromSpecs -SpecsDir $specsDir) + 1
    $featureNum = Get-Date -Format 'yyyyMMdd-HHmmss'
    $branchName = "$featureNum-$branchSuffix"
 } else {
    # Determine branch number
    if ($Number -eq 0) {
        if ($hasGit) {
            # Check existing branches on remotes
            $Number = Get-NextBranchNumber -SpecsDir $specsDir
        } else {
            # Fall back to local directory check
            $Number = (Get-HighestNumberFromSpecs -SpecsDir $specsDir) + 1
        }
    }
    $featureNum = ('{0:000}' -f $Number)
    $branchName = "$featureNum-$branchSuffix"
 }
 $featureNum = ('{0:000}' -f $Number)
 $branchName = "$featureNum-$branchSuffix"
 # GitHub enforces a 244-byte limit on branch names
 # Validate and truncate if necessary
 $maxBranchLength = 244
 if ($branchName.Length -gt $maxBranchLength) {
    # Calculate how much we need to trim from suffix
-    # Account for prefix length: timestamp (15) + hyphen (1) = 16, or sequential (3) + hyphen (1) = 4
+    # Account for: feature number (3) + hyphen (1) = 4 chars
-    $prefixLength = $featureNum.Length + 1
+    $maxSuffixLength = $maxBranchLength - 4
    $maxSuffixLength = $maxBranchLength - $prefixLength
    # Truncate suffix
    $truncatedSuffix = $branchSuffix.Substring(0, [Math]::Min($branchSuffix.Length, $maxSuffixLength))
@@ -282,11 +265,7 @@ if ($hasGit) {
        # Check if branch already exists
        $existingBranch = git branch --list $branchName 2>$null
        if ($existingBranch) {
-            if ($Timestamp) {
+            Write-Error "Error: Branch '$branchName' already exists. Please use a different feature name or specify a different number with -Number."
                Write-Error "Error: Branch '$branchName' already exists. Rerun to get a new timestamp or use a different -ShortName."
            } else {
                Write-Error "Error: Branch '$branchName' already exists. Please use a different feature name or specify a different number with -Number."
            }
            exit 1
        } else {
            Write-Error "Error: Failed to create git branch '$branchName'. Please check your git configuration and try again."
--- a/scripts/powershell/update-agent-context.ps1
+++ b/scripts/powershell/update-agent-context.ps1
@@ -9,7 +9,7 @@ Mirrors the behavior of scripts/bash/update-agent-context.sh:
 2. Plan Data Extraction
 3. Agent File Management (create from template or update existing)
 4. Content Generation (technology stack, recent changes, timestamp)
- 5. Multi-Agent Support (claude, gemini, copilot, cursor-agent, qwen, opencode, codex, windsurf, junie, kilocode, auggie, roo, codebuddy, amp, shai, tabnine, kiro-cli, agy, bob, vibe, qodercli, kimi, trae, pi, iflow, generic)
+ 5. Multi-Agent Support (claude, gemini, copilot, cursor-agent, qwen, opencode, codex, windsurf, kilocode, auggie, roo, codebuddy, amp, shai, tabnine, kiro-cli, agy, bob, vibe, qodercli, kimi, generic)
 .PARAMETER AgentType
 Optional agent key to update a single agent. If omitted, updates all existing agent files (creating a default Claude file if none exist).
@@ -25,7 +25,7 @@ Relies on common helper functions in common.ps1
 #>
 param(
    [Parameter(Position=0)]
-    [ValidateSet('claude','gemini','copilot','cursor-agent','qwen','opencode','codex','windsurf','junie','kilocode','auggie','roo','codebuddy','amp','shai','tabnine','kiro-cli','agy','bob','qodercli','vibe','kimi','trae','pi','iflow','generic')]
+    [ValidateSet('claude','gemini','copilot','cursor-agent','qwen','opencode','codex','windsurf','kilocode','auggie','roo','codebuddy','amp','shai','tabnine','kiro-cli','agy','bob','qodercli','vibe','kimi','generic')]
    [string]$AgentType
 )
@@ -51,7 +51,6 @@ $CURSOR_FILE   = Join-Path $REPO_ROOT '.cursor/rules/specify-rules.mdc'
 $QWEN_FILE     = Join-Path $REPO_ROOT 'QWEN.md'
 $AGENTS_FILE   = Join-Path $REPO_ROOT 'AGENTS.md'
 $WINDSURF_FILE = Join-Path $REPO_ROOT '.windsurf/rules/specify-rules.md'
 $JUNIE_FILE = Join-Path $REPO_ROOT '.junie/AGENTS.md'
 $KILOCODE_FILE = Join-Path $REPO_ROOT '.kilocode/rules/specify-rules.md'
 $AUGGIE_FILE   = Join-Path $REPO_ROOT '.augment/rules/specify-rules.md'
 $ROO_FILE      = Join-Path $REPO_ROOT '.roo/rules/specify-rules.md'
@@ -65,8 +64,6 @@ $AGY_FILE      = Join-Path $REPO_ROOT '.agent/rules/specify-rules.md'
 $BOB_FILE      = Join-Path $REPO_ROOT 'AGENTS.md'
 $VIBE_FILE     = Join-Path $REPO_ROOT '.vibe/agents/specify-agents.md'
 $KIMI_FILE     = Join-Path $REPO_ROOT 'KIMI.md'
 $TRAE_FILE     = Join-Path $REPO_ROOT '.trae/rules/AGENTS.md'
 $IFLOW_FILE    = Join-Path $REPO_ROOT 'IFLOW.md'
 $TEMPLATE_FILE = Join-Path $REPO_ROOT '.specify/templates/agent-file-template.md'
@@ -398,7 +395,6 @@ function Update-SpecificAgent {
        'opencode' { Update-AgentFile -TargetFile $AGENTS_FILE   -AgentName 'opencode' }
        'codex'    { Update-AgentFile -TargetFile $AGENTS_FILE   -AgentName 'Codex CLI' }
        'windsurf' { Update-AgentFile -TargetFile $WINDSURF_FILE -AgentName 'Windsurf' }
        'junie'    { Update-AgentFile -TargetFile $JUNIE_FILE    -AgentName 'Junie' }
        'kilocode' { Update-AgentFile -TargetFile $KILOCODE_FILE -AgentName 'Kilo Code' }
        'auggie'   { Update-AgentFile -TargetFile $AUGGIE_FILE   -AgentName 'Auggie CLI' }
        'roo'      { Update-AgentFile -TargetFile $ROO_FILE      -AgentName 'Roo Code' }
@@ -412,11 +408,8 @@ function Update-SpecificAgent {
        'bob'      { Update-AgentFile -TargetFile $BOB_FILE      -AgentName 'IBM Bob' }
        'vibe'     { Update-AgentFile -TargetFile $VIBE_FILE     -AgentName 'Mistral Vibe' }
        'kimi'     { Update-AgentFile -TargetFile $KIMI_FILE     -AgentName 'Kimi Code' }
        'trae'     { Update-AgentFile -TargetFile $TRAE_FILE     -AgentName 'Trae' }
        'pi'       { Update-AgentFile -TargetFile $AGENTS_FILE   -AgentName 'Pi Coding Agent' }
        'iflow'    { Update-AgentFile -TargetFile $IFLOW_FILE    -AgentName 'iFlow CLI' }
        'generic'  { Write-Info 'Generic agent: no predefined context file. Use the agent-specific update script for your agent.' }
-        default { Write-Err "Unknown agent type '$Type'"; Write-Err 'Expected: claude|gemini|copilot|cursor-agent|qwen|opencode|codex|windsurf|junie|kilocode|auggie|roo|codebuddy|amp|shai|tabnine|kiro-cli|agy|bob|vibe|qodercli|kimi|trae|pi|iflow|generic'; return $false }
+        default { Write-Err "Unknown agent type '$Type'"; Write-Err 'Expected: claude|gemini|copilot|cursor-agent|qwen|opencode|codex|windsurf|kilocode|auggie|roo|codebuddy|amp|shai|tabnine|kiro-cli|agy|bob|vibe|qodercli|kimi|generic'; return $false }
    }
 }
@@ -430,7 +423,6 @@ function Update-AllExistingAgents {
    if (Test-Path $QWEN_FILE)     { if (-not (Update-AgentFile -TargetFile $QWEN_FILE     -AgentName 'Qwen Code')) { $ok = $false }; $found = $true }
    if (Test-Path $AGENTS_FILE)   { if (-not (Update-AgentFile -TargetFile $AGENTS_FILE   -AgentName 'Codex/opencode')) { $ok = $false }; $found = $true }
    if (Test-Path $WINDSURF_FILE) { if (-not (Update-AgentFile -TargetFile $WINDSURF_FILE -AgentName 'Windsurf')) { $ok = $false }; $found = $true }
    if (Test-Path $JUNIE_FILE)    { if (-not (Update-AgentFile -TargetFile $JUNIE_FILE    -AgentName 'Junie')) { $ok = $false }; $found = $true }
    if (Test-Path $KILOCODE_FILE) { if (-not (Update-AgentFile -TargetFile $KILOCODE_FILE -AgentName 'Kilo Code')) { $ok = $false }; $found = $true }
    if (Test-Path $AUGGIE_FILE)   { if (-not (Update-AgentFile -TargetFile $AUGGIE_FILE   -AgentName 'Auggie CLI')) { $ok = $false }; $found = $true }
    if (Test-Path $ROO_FILE)      { if (-not (Update-AgentFile -TargetFile $ROO_FILE      -AgentName 'Roo Code')) { $ok = $false }; $found = $true }
@@ -443,8 +435,6 @@ function Update-AllExistingAgents {
    if (Test-Path $BOB_FILE)      { if (-not (Update-AgentFile -TargetFile $BOB_FILE      -AgentName 'IBM Bob')) { $ok = $false }; $found = $true }
    if (Test-Path $VIBE_FILE)     { if (-not (Update-AgentFile -TargetFile $VIBE_FILE     -AgentName 'Mistral Vibe')) { $ok = $false }; $found = $true }
    if (Test-Path $KIMI_FILE)     { if (-not (Update-AgentFile -TargetFile $KIMI_FILE     -AgentName 'Kimi Code')) { $ok = $false }; $found = $true }
    if (Test-Path $TRAE_FILE)     { if (-not (Update-AgentFile -TargetFile $TRAE_FILE     -AgentName 'Trae')) { $ok = $false }; $found = $true }
    if (Test-Path $IFLOW_FILE)    { if (-not (Update-AgentFile -TargetFile $IFLOW_FILE    -AgentName 'iFlow CLI')) { $ok = $false }; $found = $true }
    if (-not $found) {
        Write-Info 'No existing agent files found, creating default Claude file...'
        if (-not (Update-AgentFile -TargetFile $CLAUDE_FILE -AgentName 'Claude Code')) { $ok = $false }
@@ -459,7 +449,7 @@ function Print-Summary {
    if ($NEW_FRAMEWORK) { Write-Host "  - Added framework: $NEW_FRAMEWORK" }
    if ($NEW_DB -and $NEW_DB -ne 'N/A') { Write-Host "  - Added database: $NEW_DB" }
    Write-Host ''
-    Write-Info 'Usage: ./update-agent-context.ps1 [-AgentType claude|gemini|copilot|cursor-agent|qwen|opencode|codex|windsurf|junie|kilocode|auggie|roo|codebuddy|amp|shai|tabnine|kiro-cli|agy|bob|vibe|qodercli|kimi|trae|pi|iflow|generic]'
+    Write-Info 'Usage: ./update-agent-context.ps1 [-AgentType claude|gemini|copilot|cursor-agent|qwen|opencode|codex|windsurf|kilocode|auggie|roo|codebuddy|amp|shai|tabnine|kiro-cli|agy|bob|vibe|qodercli|generic]'
 }
 function Main {
--- a/src/specify_cli/init.py
+++ b/src/specify_cli/init.py
--- a/src/specify_cli/agent_pack.py
+++ b/src/specify_cli/agent_pack.py
@@ -1,849 +0,0 @@
 """
 Agent Pack Manager for Spec Kit
 Implements self-bootstrapping agent packs with declarative manifests
 (speckit-agent.yml) and Python bootstrap modules (bootstrap.py).
 Agent packs resolve by priority:
  1. User-level   (~/.specify/agents/<id>/)
  2. Project-level (.specify/agents/<id>/)
  3. Catalog-installed (downloaded via `specify agent add`)
  4. Embedded in wheel (official packs under core_pack/agents/)
 The embedded packs ship inside the pip wheel so that
 `pip install specify-cli && specify init --ai claude` works offline.
 """
 import hashlib
 import importlib.util
 import json
 import shutil
 from dataclasses import dataclass, field
 from pathlib import Path
 from typing import Any, Dict, List, Optional
 import yaml
 from platformdirs import user_data_path
 # ---------------------------------------------------------------------------
 # Manifest schema
 # ---------------------------------------------------------------------------
 MANIFEST_FILENAME = "speckit-agent.yml"
 BOOTSTRAP_FILENAME = "bootstrap.py"
 MANIFEST_SCHEMA_VERSION = "1.0"
 # Required top-level keys
 _REQUIRED_TOP_KEYS = {"schema_version", "agent"}
 # Required keys within the ``agent`` block
 _REQUIRED_AGENT_KEYS = {"id", "name", "version"}
 class AgentPackError(Exception):
    """Base exception for agent-pack operations."""
 class ManifestValidationError(AgentPackError):
    """Raised when a speckit-agent.yml file is invalid."""
 class PackResolutionError(AgentPackError):
    """Raised when no pack can be found for the requested agent id."""
 class AgentFileModifiedError(AgentPackError):
    """Raised when teardown finds user-modified files and ``--force`` is not set."""
 # ---------------------------------------------------------------------------
 # Manifest
 # ---------------------------------------------------------------------------
@dataclass
 class AgentManifest:
    """Parsed and validated representation of a speckit-agent.yml file."""
    # identity
    id: str
    name: str
    version: str
    description: str = ""
    author: str = ""
    license: str = ""
    # runtime
    requires_cli: bool = False
    install_url: Optional[str] = None
    cli_tool: Optional[str] = None
    # compatibility
    speckit_version: str = ">=0.1.0"
    # discovery
    tags: List[str] = field(default_factory=list)
    # command registration metadata (used by CommandRegistrar / extensions)
    commands_dir: str = ""
    command_format: str = "markdown"
    arg_placeholder: str = "$ARGUMENTS"
    file_extension: str = ".md"
    # raw data for anything else
    raw: Dict[str, Any] = field(default_factory=dict, repr=False)
    # filesystem path to the pack directory that produced this manifest
    pack_path: Optional[Path] = field(default=None, repr=False)
    @classmethod
    def from_yaml(cls, path: Path) -> "AgentManifest":
        """Load and validate a manifest from *path*.
        Raises ``ManifestValidationError`` on structural problems.
        """
        try:
            text = path.read_text(encoding="utf-8")
            data = yaml.safe_load(text) or {}
        except yaml.YAMLError as exc:
            raise ManifestValidationError(f"Invalid YAML in {path}: {exc}")
        except FileNotFoundError:
            raise ManifestValidationError(f"Manifest not found: {path}")
        return cls.from_dict(data, pack_path=path.parent)
    @classmethod
    def from_dict(cls, data: dict, *, pack_path: Optional[Path] = None) -> "AgentManifest":
        """Build a manifest from a raw dictionary."""
        if not isinstance(data, dict):
            raise ManifestValidationError("Manifest must be a YAML mapping")
        missing_top = _REQUIRED_TOP_KEYS - set(data)
        if missing_top:
            raise ManifestValidationError(
                f"Missing required top-level key(s): {', '.join(sorted(missing_top))}"
            )
        if data.get("schema_version") != MANIFEST_SCHEMA_VERSION:
            raise ManifestValidationError(
                f"Unsupported schema_version: {data.get('schema_version')!r} "
                f"(expected {MANIFEST_SCHEMA_VERSION!r})"
            )
        agent_block = data.get("agent")
        if not isinstance(agent_block, dict):
            raise ManifestValidationError("'agent' must be a mapping")
        missing_agent = _REQUIRED_AGENT_KEYS - set(agent_block)
        if missing_agent:
            raise ManifestValidationError(
                f"Missing required agent key(s): {', '.join(sorted(missing_agent))}"
            )
        runtime = data.get("runtime") or {}
        requires = data.get("requires") or {}
        tags = data.get("tags") or []
        cmd_reg = data.get("command_registration") or {}
        return cls(
            id=str(agent_block["id"]),
            name=str(agent_block["name"]),
            version=str(agent_block["version"]),
            description=str(agent_block.get("description", "")),
            author=str(agent_block.get("author", "")),
            license=str(agent_block.get("license", "")),
            requires_cli=bool(runtime.get("requires_cli", False)),
            install_url=runtime.get("install_url"),
            cli_tool=runtime.get("cli_tool"),
            speckit_version=str(requires.get("speckit_version", ">=0.1.0")),
            tags=[str(t) for t in tags] if isinstance(tags, list) else [],
            commands_dir=str(cmd_reg.get("commands_dir", "")),
            command_format=str(cmd_reg.get("format", "markdown")),
            arg_placeholder=str(cmd_reg.get("arg_placeholder", "$ARGUMENTS")),
            file_extension=str(cmd_reg.get("file_extension", ".md")),
            raw=data,
            pack_path=pack_path,
        )
 # ---------------------------------------------------------------------------
 # Bootstrap base class
 # ---------------------------------------------------------------------------
 class AgentBootstrap:
    """Base class that every agent pack's ``bootstrap.py`` must subclass.
    Subclasses override :meth:`setup` and :meth:`teardown` to define
    agent-specific lifecycle operations.
    """
    def __init__(self, manifest: AgentManifest):
        self.manifest = manifest
        self.pack_path = manifest.pack_path
    # -- lifecycle -----------------------------------------------------------
    def setup(self, project_path: Path, script_type: str, options: Dict[str, Any]) -> List[Path]:
        """Install agent files into *project_path*.
        This is invoked by ``specify init --ai <agent>`` and
        ``specify agent switch <agent>``.
        Implementations **must** return every file they create so that the
        CLI can record both agent-installed files and extension-installed
        files in a single install manifest.
        Args:
            project_path: Target project directory.
            script_type: ``"sh"`` or ``"ps"``.
            options: Arbitrary key/value options forwarded from the CLI.
        Returns:
            List of absolute paths of files created during setup.
        """
        raise NotImplementedError
    def teardown(
        self,
        project_path: Path,
        *,
        force: bool = False,
        files: Optional[Dict[str, str]] = None,
    ) -> List[str]:
        """Remove agent-specific files from *project_path*.
        Invoked by ``specify agent switch`` (for the *old* agent) and
        ``specify agent remove`` when the user explicitly uninstalls.
        Must preserve shared infrastructure (specs, plans, tasks, etc.).
        Only individual files are removed — directories are **never**
        deleted.
        The caller (CLI) is expected to check for user-modified files
        **before** invoking teardown and prompt for confirmation.  If
        *files* is provided, exactly those files are removed (values are
        ignored but kept for forward compatibility).  Otherwise the
        install manifest is read.
        Args:
            project_path: Project directory to clean up.
            force: When ``True``, remove files even if they were modified
                after installation.
            files: Mapping of project-relative path → SHA-256 hash.
                When supplied, only these files are removed and the
                install manifest is not consulted.
        Returns:
            List of project-relative paths that were actually deleted.
        """
        raise NotImplementedError
    # -- helpers available to subclasses ------------------------------------
    def agent_dir(self, project_path: Path) -> Path:
        """Return the agent's top-level directory inside the project."""
        return project_path / self.manifest.commands_dir.split("/")[0]
    def collect_installed_files(self, project_path: Path) -> List[Path]:
        """Return every file under the agent's directory tree.
        Subclasses should call this at the end of :meth:`setup` to build
        the return list.  Any files present in the agent directory at
        that point — whether created by ``setup()`` itself, by the
        scaffold pipeline, or by a preceding step — are reported.
        """
        root = self.agent_dir(project_path)
        if not root.is_dir():
            return []
        return sorted(p for p in root.rglob("*") if p.is_file())
    def _scaffold_project(
        self,
        project_path: Path,
        script_type: str,
        is_current_dir: bool = False,
    ) -> List[Path]:
        """Run the shared scaffolding pipeline and return new files.
        Calls ``scaffold_from_core_pack`` for this agent and then
        collects every file that was created.  Subclasses should call
        this from :meth:`setup` when they want to use the shared
        scaffolding rather than creating files manually.
        Returns:
            List of absolute paths of **all** files created by the
            scaffold (agent-specific commands, shared scripts,
            templates, etc.).
        """
        # Lazy import to avoid circular dependency (agent_pack is
        # imported by specify_cli.__init__).
        from specify_cli import scaffold_from_core_pack
        # Snapshot existing files
        before: set[Path] = set()
        if project_path.exists():
            before = {p for p in project_path.rglob("*") if p.is_file()}
        ok = scaffold_from_core_pack(
            project_path, self.manifest.id, script_type, is_current_dir,
        )
        if not ok:
            raise AgentPackError(
                f"Scaffolding failed for agent '{self.manifest.id}'")
        # Collect every new file
        after = {p for p in project_path.rglob("*") if p.is_file()}
        return sorted(after - before)
    def finalize_setup(
        self,
        project_path: Path,
        agent_files: Optional[List[Path]] = None,
        extension_files: Optional[List[Path]] = None,
    ) -> None:
        """Record installed files for tracked teardown.
        This must be called **after** the full init pipeline has finished
        writing files (commands, context files, extensions) into the
        project.  It combines the files reported by :meth:`setup` with
        any extra files (e.g. from extension registration), scans the
        agent's directory tree for anything additional, and writes the
        install manifest.
        ``setup()`` may return *all* files created by the shared
        scaffolding (including shared project files in ``.specify/``).
        Only files under the agent's own directory tree are recorded as
        ``agent_files`` — shared project infrastructure is not tracked
        per-agent and will not be removed during teardown.
        Args:
            agent_files: Files reported by :meth:`setup`.
            extension_files: Files created by extension registration.
        """
        all_extension = list(extension_files or [])
        # Filter agent_files: only keep files under the agent's directory
        # tree.  setup() returns *all* scaffolded files (including shared
        # project infrastructure in .specify/) but only agent-owned files
        # should be tracked per-agent — shared files are not removed
        # during teardown/switch.
        agent_root = self.agent_dir(project_path)
        agent_root_resolved = agent_root.resolve()
        all_agent: List[Path] = []
        for p in (agent_files or []):
            try:
                p.resolve().relative_to(agent_root_resolved)
                all_agent.append(p)
            except ValueError:
                pass
        # Scan the agent's directory tree for files created by later
        # init pipeline steps (skills, presets, extensions) that
        # setup() did not report.  We scan the agent root directory
        # (e.g. .claude/) so we catch both commands and skills
        # directories (skills-migrated agents replace the commands
        # directory with a sibling skills directory during init).
        if self.manifest.commands_dir:
            agent_root = self.agent_dir(project_path)
            if agent_root.is_dir():
                agent_set = {p.resolve() for p in all_agent}
                for p in agent_root.rglob("*"):
                    if p.is_file() and p.resolve() not in agent_set:
                        all_agent.append(p)
                        agent_set.add(p.resolve())
        record_installed_files(
            project_path,
            self.manifest.id,
            agent_files=all_agent,
            extension_files=all_extension,
        )
 # ---------------------------------------------------------------------------
 # Installed-file tracking
 # ---------------------------------------------------------------------------
 def _manifest_path(project_path: Path, agent_id: str) -> Path:
    """Return the path to the install manifest for *agent_id*."""
    return project_path / ".specify" / f"agent-manifest-{agent_id}.json"
 def _sha256(path: Path) -> str:
    """Return the hex SHA-256 of a file."""
    h = hashlib.sha256()
    with open(path, "rb") as f:
        for chunk in iter(lambda: f.read(8192), b""):
            h.update(chunk)
    return h.hexdigest()
 def _hash_file_list(
    project_path: Path,
    files: List[Path],
 ) -> Dict[str, str]:
    """Build a {relative_path: sha256} dict from a list of file paths."""
    entries: Dict[str, str] = {}
    for file_path in files:
        abs_path = project_path / file_path if not file_path.is_absolute() else file_path
        if abs_path.is_file():
            rel = str(abs_path.relative_to(project_path))
            entries[rel] = _sha256(abs_path)
    return entries
 def record_installed_files(
    project_path: Path,
    agent_id: str,
    agent_files: Optional[List[Path]] = None,
    extension_files: Optional[List[Path]] = None,
 ) -> Path:
    """Record the installed files and their SHA-256 hashes.
    Writes ``.specify/agent-manifest-<agent_id>.json`` containing
    categorised mappings of project-relative paths to SHA-256 digests.
    Args:
        project_path: Project root directory.
        agent_id: Agent identifier.
        agent_files: Files created by the agent's ``setup()`` and the
            init pipeline (core commands / templates).
        extension_files: Files created by extension registration.
    Returns:
        Path to the written manifest file.
    """
    agent_entries = _hash_file_list(project_path, agent_files or [])
    extension_entries = _hash_file_list(project_path, extension_files or [])
    manifest_file = _manifest_path(project_path, agent_id)
    manifest_file.parent.mkdir(parents=True, exist_ok=True)
    manifest_file.write_text(
        json.dumps(
            {
                "agent_id": agent_id,
                "agent_files": agent_entries,
                "extension_files": extension_entries,
            },
            indent=2,
        ),
        encoding="utf-8",
    )
    return manifest_file
 def _all_tracked_entries(data: dict) -> Dict[str, str]:
    """Return the combined file → hash mapping from a manifest dict.
    Supports both the new categorised layout (``agent_files`` +
    ``extension_files``) and the legacy flat ``files`` key.
    """
    combined: Dict[str, str] = {}
    # Legacy flat format
    if "files" in data and isinstance(data["files"], dict):
        combined.update(data["files"])
    # New categorised format
    if "agent_files" in data and isinstance(data["agent_files"], dict):
        combined.update(data["agent_files"])
    if "extension_files" in data and isinstance(data["extension_files"], dict):
        combined.update(data["extension_files"])
    return combined
 def get_tracked_files(
    project_path: Path,
    agent_id: str,
 ) -> tuple[Dict[str, str], Dict[str, str]]:
    """Return the tracked file hashes split by source.
    Returns:
        A tuple ``(agent_files, extension_files)`` where each is a
        ``{relative_path: sha256}`` dict.  Returns two empty dicts
        when no install manifest exists.
    """
    manifest_file = _manifest_path(project_path, agent_id)
    if not manifest_file.is_file():
        return {}, {}
    try:
        data = json.loads(manifest_file.read_text(encoding="utf-8"))
    except (json.JSONDecodeError, OSError):
        return {}, {}
    # Support legacy flat format
    if "files" in data and "agent_files" not in data:
        return dict(data["files"]), {}
    agent_entries = data.get("agent_files", {})
    ext_entries = data.get("extension_files", {})
    return dict(agent_entries), dict(ext_entries)
 def check_modified_files(
    project_path: Path,
    agent_id: str,
 ) -> List[str]:
    """Return project-relative paths of files modified since installation.
    Returns an empty list when no install manifest exists or when every
    tracked file still has its original hash.
    """
    manifest_file = _manifest_path(project_path, agent_id)
    if not manifest_file.is_file():
        return []
    try:
        data = json.loads(manifest_file.read_text(encoding="utf-8"))
    except (json.JSONDecodeError, OSError):
        return []
    entries = _all_tracked_entries(data)
    modified: List[str] = []
    for rel_path, original_hash in entries.items():
        abs_path = project_path / rel_path
        if abs_path.is_file():
            if _sha256(abs_path) != original_hash:
                modified.append(rel_path)
        # If the file was deleted by the user, treat it as not needing
        # removal — skip rather than flag as modified.
    return modified
 def remove_tracked_files(
    project_path: Path,
    agent_id: str,
    *,
    force: bool = False,
    files: Optional[Dict[str, str]] = None,
 ) -> List[str]:
    """Remove individual tracked files.
    If *files* is provided, exactly those files are removed (the values
    are ignored but accepted for forward compatibility).  Otherwise the
    install manifest for *agent_id* is read.
    Raises :class:`AgentFileModifiedError` if any tracked file was
    modified and *force* is ``False`` (only when reading from the
    manifest — callers that pass *files* are expected to have already
    prompted the user).
    Directories are **never** deleted — only individual files.
    Args:
        project_path: Project root directory.
        agent_id: Agent identifier.
        force: When ``True``, delete even modified files.
        files: Explicit mapping of project-relative path → hash.  When
            supplied, the install manifest is not consulted.
    Returns:
        List of project-relative paths that were removed.
    """
    manifest_file = _manifest_path(project_path, agent_id)
    if files is not None:
        entries = files
    else:
        if not manifest_file.is_file():
            return []
        try:
            data = json.loads(manifest_file.read_text(encoding="utf-8"))
        except (json.JSONDecodeError, OSError):
            return []
        entries = _all_tracked_entries(data)
        if not entries:
            manifest_file.unlink(missing_ok=True)
            return []
        if not force:
            modified = check_modified_files(project_path, agent_id)
            if modified:
                raise AgentFileModifiedError(
                    f"The following agent files have been modified since installation:\n"
                    + "\n".join(f"  {p}" for p in modified)
                    + "\nUse --force to remove them anyway."
                )
    removed: List[str] = []
    for rel_path in entries:
        abs_path = project_path / rel_path
        if abs_path.is_file():
            abs_path.unlink()
            removed.append(rel_path)
    # Clean up the install manifest itself
    if manifest_file.is_file():
        manifest_file.unlink(missing_ok=True)
    return removed
 # ---------------------------------------------------------------------------
 # Pack resolution
 # ---------------------------------------------------------------------------
 def _embedded_agents_dir() -> Path:
    """Return the path to the embedded agent packs inside the wheel."""
    return Path(__file__).parent / "core_pack" / "agents"
 def _user_agents_dir() -> Path:
    """Return the user-level agent overrides directory."""
    return user_data_path("specify", "github") / "agents"
 def _project_agents_dir(project_path: Path) -> Path:
    """Return the project-level agent overrides directory."""
    return project_path / ".specify" / "agents"
 def _catalog_agents_dir() -> Path:
    """Return the catalog-installed agent cache directory."""
    return user_data_path("specify", "github") / "agent-cache"
@dataclass
 class ResolvedPack:
    """Result of resolving an agent pack through the priority stack."""
    manifest: AgentManifest
    source: str          # "user", "project", "catalog", "embedded"
    path: Path
    overrides: Optional[str] = None  # version of the pack being overridden
 def resolve_agent_pack(
    agent_id: str,
    project_path: Optional[Path] = None,
 ) -> ResolvedPack:
    """Resolve an agent pack through the priority stack.
    Priority (highest first):
      1. User-level     ``~/.specify/agents/<id>/``
      2. Project-level  ``.specify/agents/<id>/``
      3. Catalog-installed cache
      4. Embedded in wheel
    Raises ``PackResolutionError`` when no pack is found at any level.
    """
    candidates: List[tuple[str, Path]] = []
    # Priority 1 — user level
    user_dir = _user_agents_dir() / agent_id
    candidates.append(("user", user_dir))
    # Priority 2 — project level
    if project_path is not None:
        proj_dir = _project_agents_dir(project_path) / agent_id
        candidates.append(("project", proj_dir))
    # Priority 3 — catalog cache
    catalog_dir = _catalog_agents_dir() / agent_id
    candidates.append(("catalog", catalog_dir))
    # Priority 4 — embedded
    embedded_dir = _embedded_agents_dir() / agent_id
    candidates.append(("embedded", embedded_dir))
    embedded_manifest: Optional[AgentManifest] = None
    for source, pack_dir in candidates:
        manifest_file = pack_dir / MANIFEST_FILENAME
        if manifest_file.is_file():
            manifest = AgentManifest.from_yaml(manifest_file)
            if source == "embedded":
                embedded_manifest = manifest
            overrides = None
            if source != "embedded" and embedded_manifest is None:
                # Try loading embedded to record what it overrides
                emb_file = _embedded_agents_dir() / agent_id / MANIFEST_FILENAME
                if emb_file.is_file():
                    try:
                        emb = AgentManifest.from_yaml(emb_file)
                        overrides = f"embedded v{emb.version}"
                    except AgentPackError:
                        pass
            return ResolvedPack(
                manifest=manifest,
                source=source,
                path=pack_dir,
                overrides=overrides,
            )
    raise PackResolutionError(
        f"Agent '{agent_id}' not found locally or in any active catalog.\n"
        f"Run 'specify agent search' to browse available agents, or\n"
        f"'specify agent add {agent_id} --from <path>' for offline install."
    )
 # ---------------------------------------------------------------------------
 # Pack discovery helpers
 # ---------------------------------------------------------------------------
 def list_embedded_agents() -> List[AgentManifest]:
    """Return manifests for all agent packs embedded in the wheel."""
    agents_dir = _embedded_agents_dir()
    if not agents_dir.is_dir():
        return []
    manifests: List[AgentManifest] = []
    for child in sorted(agents_dir.iterdir()):
        manifest_file = child / MANIFEST_FILENAME
        if child.is_dir() and manifest_file.is_file():
            try:
                manifests.append(AgentManifest.from_yaml(manifest_file))
            except AgentPackError:
                continue
    return manifests
 def list_all_agents(project_path: Optional[Path] = None) -> List[ResolvedPack]:
    """List all available agents, resolved through the priority stack.
    Each agent id appears at most once, at its highest-priority source.
    """
    seen: dict[str, ResolvedPack] = {}
    # Start from lowest priority (embedded) so higher priorities overwrite
    for manifest in list_embedded_agents():
        seen[manifest.id] = ResolvedPack(
            manifest=manifest,
            source="embedded",
            path=manifest.pack_path or _embedded_agents_dir() / manifest.id,
        )
    # Catalog cache
    catalog_dir = _catalog_agents_dir()
    if catalog_dir.is_dir():
        for child in sorted(catalog_dir.iterdir()):
            mf = child / MANIFEST_FILENAME
            if child.is_dir() and mf.is_file():
                try:
                    m = AgentManifest.from_yaml(mf)
                    overrides = f"embedded v{seen[m.id].manifest.version}" if m.id in seen else None
                    seen[m.id] = ResolvedPack(manifest=m, source="catalog", path=child, overrides=overrides)
                except AgentPackError:
                    continue
    # Project-level
    if project_path is not None:
        proj_dir = _project_agents_dir(project_path)
        if proj_dir.is_dir():
            for child in sorted(proj_dir.iterdir()):
                mf = child / MANIFEST_FILENAME
                if child.is_dir() and mf.is_file():
                    try:
                        m = AgentManifest.from_yaml(mf)
                        overrides = f"embedded v{seen[m.id].manifest.version}" if m.id in seen else None
                        seen[m.id] = ResolvedPack(manifest=m, source="project", path=child, overrides=overrides)
                    except AgentPackError:
                        continue
    # User-level
    user_dir = _user_agents_dir()
    if user_dir.is_dir():
        for child in sorted(user_dir.iterdir()):
            mf = child / MANIFEST_FILENAME
            if child.is_dir() and mf.is_file():
                try:
                    m = AgentManifest.from_yaml(mf)
                    overrides = f"embedded v{seen[m.id].manifest.version}" if m.id in seen else None
                    seen[m.id] = ResolvedPack(manifest=m, source="user", path=child, overrides=overrides)
                except AgentPackError:
                    continue
    return sorted(seen.values(), key=lambda r: r.manifest.id)
 def load_bootstrap(pack_path: Path, manifest: AgentManifest) -> AgentBootstrap:
    """Import ``bootstrap.py`` from *pack_path* and return the bootstrap instance.
    The bootstrap module must define exactly one public subclass of
    ``AgentBootstrap``.  That class is instantiated with *manifest* and
    returned.
    """
    bootstrap_file = pack_path / BOOTSTRAP_FILENAME
    if not bootstrap_file.is_file():
        raise AgentPackError(
            f"Bootstrap module not found: {bootstrap_file}"
        )
    spec = importlib.util.spec_from_file_location(
        f"speckit_agent_{manifest.id}_bootstrap", bootstrap_file
    )
    if spec is None or spec.loader is None:
        raise AgentPackError(f"Cannot load bootstrap module: {bootstrap_file}")
    module = importlib.util.module_from_spec(spec)
    spec.loader.exec_module(module)
    # Find the AgentBootstrap subclass
    candidates = [
        obj
        for name, obj in vars(module).items()
        if (
            isinstance(obj, type)
            and issubclass(obj, AgentBootstrap)
            and obj is not AgentBootstrap
            and not name.startswith("_")
        )
    ]
    if not candidates:
        raise AgentPackError(
            f"No AgentBootstrap subclass found in {bootstrap_file}"
        )
    if len(candidates) > 1:
        raise AgentPackError(
            f"Multiple AgentBootstrap subclasses in {bootstrap_file}: "
            f"{[c.__name__ for c in candidates]}"
        )
    return candidates[0](manifest)
 def validate_pack(pack_path: Path) -> List[str]:
    """Validate a pack directory structure and return a list of warnings.
    Returns an empty list when the pack is fully valid.
    Raises ``ManifestValidationError`` on hard errors.
    """
    warnings: List[str] = []
    manifest_file = pack_path / MANIFEST_FILENAME
    if not manifest_file.is_file():
        raise ManifestValidationError(
            f"Missing {MANIFEST_FILENAME} in {pack_path}"
        )
    manifest = AgentManifest.from_yaml(manifest_file)
    bootstrap_file = pack_path / BOOTSTRAP_FILENAME
    if not bootstrap_file.is_file():
        warnings.append(f"Missing {BOOTSTRAP_FILENAME} (pack cannot be bootstrapped)")
    if not manifest.commands_dir:
        warnings.append("command_registration.commands_dir not set in manifest")
    if not manifest.description:
        warnings.append("agent.description is empty")
    if not manifest.tags:
        warnings.append("No tags specified (reduces discoverability)")
    return warnings
 def export_pack(agent_id: str, dest: Path, project_path: Optional[Path] = None) -> Path:
    """Export the active pack for *agent_id* to *dest*.
    Returns the path to the exported pack directory.
    """
    resolved = resolve_agent_pack(agent_id, project_path=project_path)
    dest.mkdir(parents=True, exist_ok=True)
    shutil.copytree(resolved.path, dest, dirs_exist_ok=True)
    return dest
--- a/src/specify_cli/agents.py
+++ b/src/specify_cli/agents.py
@@ -9,7 +9,6 @@ command files into agent-specific directories in the correct format.
 from pathlib import Path
 from typing import Dict, List, Any
 import platform
 import yaml
@@ -60,19 +59,13 @@ class CommandRegistrar:
            "extension": ".md"
        },
        "codex": {
-            "dir": ".agents/skills",
+            "dir": ".codex/prompts",
            "format": "markdown",
            "args": "$ARGUMENTS",
            "extension": "/SKILL.md",
        },
        "windsurf": {
            "dir": ".windsurf/workflows",
            "format": "markdown",
            "args": "$ARGUMENTS",
            "extension": ".md"
        },
-        "junie": {
+        "windsurf": {
-            "dir": ".junie/commands",
+            "dir": ".windsurf/workflows",
            "format": "markdown",
            "args": "$ARGUMENTS",
            "extension": ".md"
@@ -113,12 +106,6 @@ class CommandRegistrar:
            "args": "$ARGUMENTS",
            "extension": ".md"
        },
        "pi": {
            "dir": ".pi/prompts",
            "format": "markdown",
            "args": "$ARGUMENTS",
            "extension": ".md"
        },
        "amp": {
            "dir": ".agents/commands",
            "format": "markdown",
@@ -147,19 +134,7 @@ class CommandRegistrar:
            "dir": ".kimi/skills",
            "format": "markdown",
            "args": "$ARGUMENTS",
-            "extension": "/SKILL.md",
+            "extension": "/SKILL.md"
        },
        "trae": {
            "dir": ".trae/rules",
            "format": "markdown",
            "args": "$ARGUMENTS",
            "extension": ".md"
        },
        "iflow": {
            "dir": ".iflow/commands",
            "format": "markdown",
            "args": "$ARGUMENTS",
            "extension": ".md"
        }
    }
@@ -189,9 +164,6 @@ class CommandRegistrar:
        except yaml.YAMLError:
            frontmatter = {}
        if not isinstance(frontmatter, dict):
            frontmatter = {}
        return frontmatter, body
    @staticmethod
@@ -219,14 +191,11 @@ class CommandRegistrar:
        Returns:
            Modified frontmatter with adjusted paths
        """
-        for script_key in ("scripts", "agent_scripts"):
+        if "scripts" in frontmatter:
-            scripts = frontmatter.get(script_key)
+            for key in frontmatter["scripts"]:
-            if not isinstance(scripts, dict):
+                script_path = frontmatter["scripts"][key]
-                continue
+                if script_path.startswith("../../scripts/"):
-
+                    frontmatter["scripts"][key] = f".specify/scripts/{script_path[14:]}"
            for key, script_path in scripts.items():
                if isinstance(script_path, str) and script_path.startswith("../../scripts/"):
                    scripts[key] = f".specify/scripts/{script_path[14:]}"
        return frontmatter
    def render_markdown_command(
@@ -283,101 +252,6 @@ class CommandRegistrar:
        return "\n".join(toml_lines)
    def render_skill_command(
        self,
        agent_name: str,
        skill_name: str,
        frontmatter: dict,
        body: str,
        source_id: str,
        source_file: str,
        project_root: Path,
    ) -> str:
        """Render a command override as a SKILL.md file.
        SKILL-target agents should receive the same skills-oriented
        frontmatter shape used elsewhere in the project instead of the
        original command frontmatter.
        Technical debt note:
        Spec-kit currently has multiple SKILL.md generators (template packaging,
        init-time conversion, and extension/preset overrides). Keep the skill
        frontmatter keys aligned (name/description/compatibility/metadata, with
        metadata.author and metadata.source subkeys) to avoid drift across agents.
        """
        if not isinstance(frontmatter, dict):
            frontmatter = {}
        if agent_name == "codex":
            body = self._resolve_codex_skill_placeholders(frontmatter, body, project_root)
        description = frontmatter.get("description", f"Spec-kit workflow command: {skill_name}")
        skill_frontmatter = {
            "name": skill_name,
            "description": description,
            "compatibility": "Requires spec-kit project structure with .specify/ directory",
            "metadata": {
                "author": "github-spec-kit",
                "source": f"{source_id}:{source_file}",
            },
        }
        return self.render_frontmatter(skill_frontmatter) + "\n" + body
    @staticmethod
    def _resolve_codex_skill_placeholders(frontmatter: dict, body: str, project_root: Path) -> str:
        """Resolve script placeholders for Codex skill overrides.
        This intentionally scopes the fix to Codex, which is the newly
        migrated runtime path in this PR. Existing Kimi behavior is left
        unchanged for now.
        """
        try:
            from . import load_init_options
        except ImportError:
            return body
        if not isinstance(frontmatter, dict):
            frontmatter = {}
        scripts = frontmatter.get("scripts", {}) or {}
        agent_scripts = frontmatter.get("agent_scripts", {}) or {}
        if not isinstance(scripts, dict):
            scripts = {}
        if not isinstance(agent_scripts, dict):
            agent_scripts = {}
        script_variant = load_init_options(project_root).get("script")
        if script_variant not in {"sh", "ps"}:
            fallback_order = []
            default_variant = "ps" if platform.system().lower().startswith("win") else "sh"
            secondary_variant = "sh" if default_variant == "ps" else "ps"
            if default_variant in scripts or default_variant in agent_scripts:
                fallback_order.append(default_variant)
            if secondary_variant in scripts or secondary_variant in agent_scripts:
                fallback_order.append(secondary_variant)
            for key in scripts:
                if key not in fallback_order:
                    fallback_order.append(key)
            for key in agent_scripts:
                if key not in fallback_order:
                    fallback_order.append(key)
            script_variant = fallback_order[0] if fallback_order else None
        script_command = scripts.get(script_variant) if script_variant else None
        if script_command:
            script_command = script_command.replace("{ARGS}", "$ARGUMENTS")
            body = body.replace("{SCRIPT}", script_command)
        agent_script_command = agent_scripts.get(script_variant) if script_variant else None
        if agent_script_command:
            agent_script_command = agent_script_command.replace("{ARGS}", "$ARGUMENTS")
            body = body.replace("{AGENT_SCRIPT}", agent_script_command)
        return body.replace("{ARGS}", "$ARGUMENTS").replace("__AGENT__", "codex")
    def _convert_argument_placeholder(self, content: str, from_placeholder: str, to_placeholder: str) -> str:
        """Convert argument placeholder format.
@@ -391,18 +265,6 @@ class CommandRegistrar:
        """
        return content.replace(from_placeholder, to_placeholder)
    @staticmethod
    def _compute_output_name(agent_name: str, cmd_name: str, agent_config: Dict[str, Any]) -> str:
        """Compute the on-disk command or skill name for an agent."""
        if agent_config["extension"] != "/SKILL.md":
            return cmd_name
        short_name = cmd_name
        if short_name.startswith("speckit."):
            short_name = short_name[len("speckit."):]
        return f"speckit.{short_name}" if agent_name == "kimi" else f"speckit-{short_name}"
    def register_commands(
        self,
        agent_name: str,
@@ -454,20 +316,14 @@ class CommandRegistrar:
                body, "$ARGUMENTS", agent_config["args"]
            )
-            output_name = self._compute_output_name(agent_name, cmd_name, agent_config)
+            if agent_config["format"] == "markdown":
            if agent_config["extension"] == "/SKILL.md":
                output = self.render_skill_command(
                    agent_name, output_name, frontmatter, body, source_id, cmd_file, project_root
                )
            elif agent_config["format"] == "markdown":
                output = self.render_markdown_command(frontmatter, body, source_id, context_note)
            elif agent_config["format"] == "toml":
                output = self.render_toml_command(frontmatter, body, source_id)
            else:
                raise ValueError(f"Unsupported format: {agent_config['format']}")
-            dest_file = commands_dir / f"{output_name}{agent_config['extension']}"
+            dest_file = commands_dir / f"{cmd_name}{agent_config['extension']}"
            dest_file.parent.mkdir(parents=True, exist_ok=True)
            dest_file.write_text(output, encoding="utf-8")
@@ -477,15 +333,9 @@ class CommandRegistrar:
            registered.append(cmd_name)
            for alias in cmd_info.get("aliases", []):
-                alias_output_name = self._compute_output_name(agent_name, alias, agent_config)
+                alias_file = commands_dir / f"{alias}{agent_config['extension']}"
                alias_output = output
                if agent_config["extension"] == "/SKILL.md":
                    alias_output = self.render_skill_command(
                        agent_name, alias_output_name, frontmatter, body, source_id, cmd_file, project_root
                    )
                alias_file = commands_dir / f"{alias_output_name}{agent_config['extension']}"
                alias_file.parent.mkdir(parents=True, exist_ok=True)
-                alias_file.write_text(alias_output, encoding="utf-8")
+                alias_file.write_text(output, encoding="utf-8")
                if agent_name == "copilot":
                    self.write_copilot_prompt(project_root, alias)
                registered.append(alias)
@@ -528,7 +378,7 @@ class CommandRegistrar:
        results = {}
        for agent_name, agent_config in self.AGENT_CONFIGS.items():
-            agent_dir = project_root / agent_config["dir"]
+            agent_dir = project_root / agent_config["dir"].split("/")[0]
            if agent_dir.exists():
                try:
@@ -562,8 +412,7 @@ class CommandRegistrar:
            commands_dir = project_root / agent_config["dir"]
            for cmd_name in cmd_names:
-                output_name = self._compute_output_name(agent_name, cmd_name, agent_config)
+                cmd_file = commands_dir / f"{cmd_name}{agent_config['extension']}"
                cmd_file = commands_dir / f"{output_name}{agent_config['extension']}"
                if cmd_file.exists():
                    cmd_file.unlink()
--- a/src/specify_cli/core_pack/agents/init.py
+++ b/src/specify_cli/core_pack/agents/init.py
--- a/src/specify_cli/core_pack/agents/agy/init.py
+++ b/src/specify_cli/core_pack/agents/agy/init.py
--- a/src/specify_cli/core_pack/agents/agy/bootstrap.py
+++ b/src/specify_cli/core_pack/agents/agy/bootstrap.py
@@ -1,30 +0,0 @@
 """Bootstrap module for Antigravity agent pack."""
 from pathlib import Path
 from typing import Any, Dict, List, Optional
 from specify_cli.agent_pack import AgentBootstrap, remove_tracked_files
 class Agy(AgentBootstrap):
    """Bootstrap for Antigravity."""
    AGENT_DIR = ".agent"
    COMMANDS_SUBDIR = "commands"
    def setup(self, project_path: Path, script_type: str, options: Dict[str, Any]) -> List[Path]:
        """Install Antigravity agent files into the project."""
        commands_dir = project_path / self.AGENT_DIR / self.COMMANDS_SUBDIR
        commands_dir.mkdir(parents=True, exist_ok=True)
        return self._scaffold_project(project_path, script_type)
    def teardown(self, project_path: Path, *, force: bool = False, files: Optional[Dict[str, str]] = None) -> List[str]:
        """Remove Antigravity agent files from the project.
        Only removes individual tracked files — directories are never
        deleted.  When *files* is provided, exactly those files are
        removed.  Otherwise the install manifest is consulted and
        ``AgentFileModifiedError`` is raised if any tracked file was
        modified and *force* is ``False``.
        """
        return remove_tracked_files(project_path, self.manifest.id, force=force, files=files)
--- a/src/specify_cli/core_pack/agents/agy/speckit-agent.yml
+++ b/src/specify_cli/core_pack/agents/agy/speckit-agent.yml
@@ -1,23 +0,0 @@
 schema_version: "1.0"
 agent:
  id: "agy"
  name: "Antigravity"
  version: "1.0.0"
  description: "Antigravity IDE for AI-assisted development"
  author: "github"
  license: "MIT"
 runtime:
  requires_cli: false
 requires:
  speckit_version: ">=0.1.0"
 tags: ['ide', 'antigravity']
 command_registration:
  commands_dir: ".agent/commands"
  format: "markdown"
  arg_placeholder: "$ARGUMENTS"
  file_extension: ".md"
--- a/src/specify_cli/core_pack/agents/amp/init.py
+++ b/src/specify_cli/core_pack/agents/amp/init.py
--- a/src/specify_cli/core_pack/agents/amp/bootstrap.py
+++ b/src/specify_cli/core_pack/agents/amp/bootstrap.py
@@ -1,30 +0,0 @@
 """Bootstrap module for Amp agent pack."""
 from pathlib import Path
 from typing import Any, Dict, List, Optional
 from specify_cli.agent_pack import AgentBootstrap, remove_tracked_files
 class Amp(AgentBootstrap):
    """Bootstrap for Amp."""
    AGENT_DIR = ".agents"
    COMMANDS_SUBDIR = "commands"
    def setup(self, project_path: Path, script_type: str, options: Dict[str, Any]) -> List[Path]:
        """Install Amp agent files into the project."""
        commands_dir = project_path / self.AGENT_DIR / self.COMMANDS_SUBDIR
        commands_dir.mkdir(parents=True, exist_ok=True)
        return self._scaffold_project(project_path, script_type)
    def teardown(self, project_path: Path, *, force: bool = False, files: Optional[Dict[str, str]] = None) -> List[str]:
        """Remove Amp agent files from the project.
        Only removes individual tracked files — directories are never
        deleted.  When *files* is provided, exactly those files are
        removed.  Otherwise the install manifest is consulted and
        ``AgentFileModifiedError`` is raised if any tracked file was
        modified and *force* is ``False``.
        """
        return remove_tracked_files(project_path, self.manifest.id, force=force, files=files)
--- a/src/specify_cli/core_pack/agents/amp/speckit-agent.yml
+++ b/src/specify_cli/core_pack/agents/amp/speckit-agent.yml
@@ -1,25 +0,0 @@
 schema_version: "1.0"
 agent:
  id: "amp"
  name: "Amp"
  version: "1.0.0"
  description: "Amp CLI for AI-assisted development"
  author: "github"
  license: "MIT"
 runtime:
  requires_cli: true
  install_url: "https://ampcode.com/manual#install"
  cli_tool: "amp"
 requires:
  speckit_version: ">=0.1.0"
 tags: ['cli', 'amp']
 command_registration:
  commands_dir: ".agents/commands"
  format: "markdown"
  arg_placeholder: "$ARGUMENTS"
  file_extension: ".md"
--- a/src/specify_cli/core_pack/agents/auggie/init.py
+++ b/src/specify_cli/core_pack/agents/auggie/init.py
--- a/src/specify_cli/core_pack/agents/auggie/bootstrap.py
+++ b/src/specify_cli/core_pack/agents/auggie/bootstrap.py
@@ -1,30 +0,0 @@
 """Bootstrap module for Auggie CLI agent pack."""
 from pathlib import Path
 from typing import Any, Dict, List, Optional
 from specify_cli.agent_pack import AgentBootstrap, remove_tracked_files
 class Auggie(AgentBootstrap):
    """Bootstrap for Auggie CLI."""
    AGENT_DIR = ".augment"
    COMMANDS_SUBDIR = "commands"
    def setup(self, project_path: Path, script_type: str, options: Dict[str, Any]) -> List[Path]:
        """Install Auggie CLI agent files into the project."""
        commands_dir = project_path / self.AGENT_DIR / self.COMMANDS_SUBDIR
        commands_dir.mkdir(parents=True, exist_ok=True)
        return self._scaffold_project(project_path, script_type)
    def teardown(self, project_path: Path, *, force: bool = False, files: Optional[Dict[str, str]] = None) -> List[str]:
        """Remove Auggie CLI agent files from the project.
        Only removes individual tracked files — directories are never
        deleted.  When *files* is provided, exactly those files are
        removed.  Otherwise the install manifest is consulted and
        ``AgentFileModifiedError`` is raised if any tracked file was
        modified and *force* is ``False``.
        """
        return remove_tracked_files(project_path, self.manifest.id, force=force, files=files)
--- a/src/specify_cli/core_pack/agents/auggie/speckit-agent.yml
+++ b/src/specify_cli/core_pack/agents/auggie/speckit-agent.yml
@@ -1,25 +0,0 @@
 schema_version: "1.0"
 agent:
  id: "auggie"
  name: "Auggie CLI"
  version: "1.0.0"
  description: "Auggie CLI for AI-assisted development"
  author: "github"
  license: "MIT"
 runtime:
  requires_cli: true
  install_url: "https://docs.augmentcode.com/cli/setup-auggie/install-auggie-cli"
  cli_tool: "auggie"
 requires:
  speckit_version: ">=0.1.0"
 tags: ['cli', 'augment', 'auggie']
 command_registration:
  commands_dir: ".augment/commands"
  format: "markdown"
  arg_placeholder: "$ARGUMENTS"
  file_extension: ".md"
--- a/src/specify_cli/core_pack/agents/bob/init.py
+++ b/src/specify_cli/core_pack/agents/bob/init.py
--- a/src/specify_cli/core_pack/agents/bob/bootstrap.py
+++ b/src/specify_cli/core_pack/agents/bob/bootstrap.py
@@ -1,30 +0,0 @@
 """Bootstrap module for IBM Bob agent pack."""
 from pathlib import Path
 from typing import Any, Dict, List, Optional
 from specify_cli.agent_pack import AgentBootstrap, remove_tracked_files
 class Bob(AgentBootstrap):
    """Bootstrap for IBM Bob."""
    AGENT_DIR = ".bob"
    COMMANDS_SUBDIR = "commands"
    def setup(self, project_path: Path, script_type: str, options: Dict[str, Any]) -> List[Path]:
        """Install IBM Bob agent files into the project."""
        commands_dir = project_path / self.AGENT_DIR / self.COMMANDS_SUBDIR
        commands_dir.mkdir(parents=True, exist_ok=True)
        return self._scaffold_project(project_path, script_type)
    def teardown(self, project_path: Path, *, force: bool = False, files: Optional[Dict[str, str]] = None) -> List[str]:
        """Remove IBM Bob agent files from the project.
        Only removes individual tracked files — directories are never
        deleted.  When *files* is provided, exactly those files are
        removed.  Otherwise the install manifest is consulted and
        ``AgentFileModifiedError`` is raised if any tracked file was
        modified and *force* is ``False``.
        """
        return remove_tracked_files(project_path, self.manifest.id, force=force, files=files)
--- a/src/specify_cli/core_pack/agents/bob/speckit-agent.yml
+++ b/src/specify_cli/core_pack/agents/bob/speckit-agent.yml
@@ -1,23 +0,0 @@
 schema_version: "1.0"
 agent:
  id: "bob"
  name: "IBM Bob"
  version: "1.0.0"
  description: "IBM Bob IDE for AI-assisted development"
  author: "github"
  license: "MIT"
 runtime:
  requires_cli: false
 requires:
  speckit_version: ">=0.1.0"
 tags: ['ide', 'ibm', 'bob']
 command_registration:
  commands_dir: ".bob/commands"
  format: "markdown"
  arg_placeholder: "$ARGUMENTS"
  file_extension: ".md"
--- a/src/specify_cli/core_pack/agents/claude/init.py
+++ b/src/specify_cli/core_pack/agents/claude/init.py
--- a/src/specify_cli/core_pack/agents/claude/bootstrap.py
+++ b/src/specify_cli/core_pack/agents/claude/bootstrap.py
@@ -1,30 +0,0 @@
 """Bootstrap module for Claude Code agent pack."""
 from pathlib import Path
 from typing import Any, Dict, List, Optional
 from specify_cli.agent_pack import AgentBootstrap, remove_tracked_files
 class Claude(AgentBootstrap):
    """Bootstrap for Claude Code."""
    AGENT_DIR = ".claude"
    COMMANDS_SUBDIR = "commands"
    def setup(self, project_path: Path, script_type: str, options: Dict[str, Any]) -> List[Path]:
        """Install Claude Code agent files into the project."""
        commands_dir = project_path / self.AGENT_DIR / self.COMMANDS_SUBDIR
        commands_dir.mkdir(parents=True, exist_ok=True)
        return self._scaffold_project(project_path, script_type)
    def teardown(self, project_path: Path, *, force: bool = False, files: Optional[Dict[str, str]] = None) -> List[str]:
        """Remove Claude Code agent files from the project.
        Only removes individual tracked files — directories are never
        deleted.  When *files* is provided, exactly those files are
        removed.  Otherwise the install manifest is consulted and
        ``AgentFileModifiedError`` is raised if any tracked file was
        modified and *force* is ``False``.
        """
        return remove_tracked_files(project_path, self.manifest.id, force=force, files=files)
--- a/src/specify_cli/core_pack/agents/claude/speckit-agent.yml
+++ b/src/specify_cli/core_pack/agents/claude/speckit-agent.yml
@@ -1,25 +0,0 @@
 schema_version: "1.0"
 agent:
  id: "claude"
  name: "Claude Code"
  version: "1.0.0"
  description: "Anthropic's Claude Code CLI for AI-assisted development"
  author: "github"
  license: "MIT"
 runtime:
  requires_cli: true
  install_url: "https://docs.anthropic.com/en/docs/claude-code/setup"
  cli_tool: "claude"
 requires:
  speckit_version: ">=0.1.0"
 tags: ['cli', 'anthropic', 'claude']
 command_registration:
  commands_dir: ".claude/commands"
  format: "markdown"
  arg_placeholder: "$ARGUMENTS"
  file_extension: ".md"
--- a/src/specify_cli/core_pack/agents/codebuddy/init.py
+++ b/src/specify_cli/core_pack/agents/codebuddy/init.py
--- a/src/specify_cli/core_pack/agents/codebuddy/bootstrap.py
+++ b/src/specify_cli/core_pack/agents/codebuddy/bootstrap.py
@@ -1,30 +0,0 @@
 """Bootstrap module for CodeBuddy agent pack."""
 from pathlib import Path
 from typing import Any, Dict, List, Optional
 from specify_cli.agent_pack import AgentBootstrap, remove_tracked_files
 class Codebuddy(AgentBootstrap):
    """Bootstrap for CodeBuddy."""
    AGENT_DIR = ".codebuddy"
    COMMANDS_SUBDIR = "commands"
    def setup(self, project_path: Path, script_type: str, options: Dict[str, Any]) -> List[Path]:
        """Install CodeBuddy agent files into the project."""
        commands_dir = project_path / self.AGENT_DIR / self.COMMANDS_SUBDIR
        commands_dir.mkdir(parents=True, exist_ok=True)
        return self._scaffold_project(project_path, script_type)
    def teardown(self, project_path: Path, *, force: bool = False, files: Optional[Dict[str, str]] = None) -> List[str]:
        """Remove CodeBuddy agent files from the project.
        Only removes individual tracked files — directories are never
        deleted.  When *files* is provided, exactly those files are
        removed.  Otherwise the install manifest is consulted and
        ``AgentFileModifiedError`` is raised if any tracked file was
        modified and *force* is ``False``.
        """
        return remove_tracked_files(project_path, self.manifest.id, force=force, files=files)
--- a/src/specify_cli/core_pack/agents/codebuddy/speckit-agent.yml
+++ b/src/specify_cli/core_pack/agents/codebuddy/speckit-agent.yml
@@ -1,25 +0,0 @@
 schema_version: "1.0"
 agent:
  id: "codebuddy"
  name: "CodeBuddy"
  version: "1.0.0"
  description: "CodeBuddy CLI for AI-assisted development"
  author: "github"
  license: "MIT"
 runtime:
  requires_cli: true
  install_url: "https://www.codebuddy.ai/cli"
  cli_tool: "codebuddy"
 requires:
  speckit_version: ">=0.1.0"
 tags: ['cli', 'codebuddy']
 command_registration:
  commands_dir: ".codebuddy/commands"
  format: "markdown"
  arg_placeholder: "$ARGUMENTS"
  file_extension: ".md"
--- a/src/specify_cli/core_pack/agents/codex/init.py
+++ b/src/specify_cli/core_pack/agents/codex/init.py
--- a/src/specify_cli/core_pack/agents/codex/bootstrap.py
+++ b/src/specify_cli/core_pack/agents/codex/bootstrap.py
@@ -1,30 +0,0 @@
 """Bootstrap module for Codex CLI agent pack."""
 from pathlib import Path
 from typing import Any, Dict, List, Optional
 from specify_cli.agent_pack import AgentBootstrap, remove_tracked_files
 class Codex(AgentBootstrap):
    """Bootstrap for Codex CLI."""
    AGENT_DIR = ".agents"
    COMMANDS_SUBDIR = "skills"
    def setup(self, project_path: Path, script_type: str, options: Dict[str, Any]) -> List[Path]:
        """Install Codex CLI agent files into the project."""
        commands_dir = project_path / self.AGENT_DIR / self.COMMANDS_SUBDIR
        commands_dir.mkdir(parents=True, exist_ok=True)
        return self._scaffold_project(project_path, script_type)
    def teardown(self, project_path: Path, *, force: bool = False, files: Optional[Dict[str, str]] = None) -> List[str]:
        """Remove Codex CLI agent files from the project.
        Only removes individual tracked files — directories are never
        deleted.  When *files* is provided, exactly those files are
        removed.  Otherwise the install manifest is consulted and
        ``AgentFileModifiedError`` is raised if any tracked file was
        modified and *force* is ``False``.
        """
        return remove_tracked_files(project_path, self.manifest.id, force=force, files=files)
--- a/src/specify_cli/core_pack/agents/codex/speckit-agent.yml
+++ b/src/specify_cli/core_pack/agents/codex/speckit-agent.yml
@@ -1,25 +0,0 @@
 schema_version: "1.0"
 agent:
  id: "codex"
  name: "Codex CLI"
  version: "1.0.0"
  description: "OpenAI Codex CLI with project skills support"
  author: "github"
  license: "MIT"
 runtime:
  requires_cli: true
  install_url: "https://github.com/openai/codex"
  cli_tool: "codex"
 requires:
  speckit_version: ">=0.1.0"
 tags: ['cli', 'openai', 'codex', 'skills']
 command_registration:
  commands_dir: ".agents/skills"
  format: "markdown"
  arg_placeholder: "$ARGUMENTS"
  file_extension: "/SKILL.md"
--- a/src/specify_cli/core_pack/agents/copilot/init.py
+++ b/src/specify_cli/core_pack/agents/copilot/init.py
--- a/src/specify_cli/core_pack/agents/copilot/bootstrap.py
+++ b/src/specify_cli/core_pack/agents/copilot/bootstrap.py
@@ -1,30 +0,0 @@
 """Bootstrap module for GitHub Copilot agent pack."""
 from pathlib import Path
 from typing import Any, Dict, List, Optional
 from specify_cli.agent_pack import AgentBootstrap, remove_tracked_files
 class Copilot(AgentBootstrap):
    """Bootstrap for GitHub Copilot."""
    AGENT_DIR = ".github"
    COMMANDS_SUBDIR = "agents"
    def setup(self, project_path: Path, script_type: str, options: Dict[str, Any]) -> List[Path]:
        """Install GitHub Copilot agent files into the project."""
        commands_dir = project_path / self.AGENT_DIR / self.COMMANDS_SUBDIR
        commands_dir.mkdir(parents=True, exist_ok=True)
        return self._scaffold_project(project_path, script_type)
    def teardown(self, project_path: Path, *, force: bool = False, files: Optional[Dict[str, str]] = None) -> List[str]:
        """Remove GitHub Copilot agent files from the project.
        Only removes individual tracked files — directories are never
        deleted.  When *files* is provided, exactly those files are
        removed.  Otherwise the install manifest is consulted and
        ``AgentFileModifiedError`` is raised if any tracked file was
        modified and *force* is ``False``.
        """
        return remove_tracked_files(project_path, self.manifest.id, force=force, files=files)
--- a/src/specify_cli/core_pack/agents/copilot/speckit-agent.yml
+++ b/src/specify_cli/core_pack/agents/copilot/speckit-agent.yml
@@ -1,23 +0,0 @@
 schema_version: "1.0"
 agent:
  id: "copilot"
  name: "GitHub Copilot"
  version: "1.0.0"
  description: "GitHub Copilot for AI-assisted development in VS Code"
  author: "github"
  license: "MIT"
 runtime:
  requires_cli: false
 requires:
  speckit_version: ">=0.1.0"
 tags: ['ide', 'github', 'copilot']
 command_registration:
  commands_dir: ".github/agents"
  format: "markdown"
  arg_placeholder: "$ARGUMENTS"
  file_extension: ".agent.md"
--- a/src/specify_cli/core_pack/agents/cursor-agent/init.py
+++ b/src/specify_cli/core_pack/agents/cursor-agent/init.py
--- a/src/specify_cli/core_pack/agents/cursor-agent/bootstrap.py
+++ b/src/specify_cli/core_pack/agents/cursor-agent/bootstrap.py
@@ -1,30 +0,0 @@
 """Bootstrap module for Cursor agent pack."""
 from pathlib import Path
 from typing import Any, Dict, List, Optional
 from specify_cli.agent_pack import AgentBootstrap, remove_tracked_files
 class CursorAgent(AgentBootstrap):
    """Bootstrap for Cursor."""
    AGENT_DIR = ".cursor"
    COMMANDS_SUBDIR = "commands"
    def setup(self, project_path: Path, script_type: str, options: Dict[str, Any]) -> List[Path]:
        """Install Cursor agent files into the project."""
        commands_dir = project_path / self.AGENT_DIR / self.COMMANDS_SUBDIR
        commands_dir.mkdir(parents=True, exist_ok=True)
        return self._scaffold_project(project_path, script_type)
    def teardown(self, project_path: Path, *, force: bool = False, files: Optional[Dict[str, str]] = None) -> List[str]:
        """Remove Cursor agent files from the project.
        Only removes individual tracked files — directories are never
        deleted.  When *files* is provided, exactly those files are
        removed.  Otherwise the install manifest is consulted and
        ``AgentFileModifiedError`` is raised if any tracked file was
        modified and *force* is ``False``.
        """
        return remove_tracked_files(project_path, self.manifest.id, force=force, files=files)
--- a/src/specify_cli/core_pack/agents/cursor-agent/speckit-agent.yml
+++ b/src/specify_cli/core_pack/agents/cursor-agent/speckit-agent.yml
@@ -1,23 +0,0 @@
 schema_version: "1.0"
 agent:
  id: "cursor-agent"
  name: "Cursor"
  version: "1.0.0"
  description: "Cursor IDE for AI-assisted development"
  author: "github"
  license: "MIT"
 runtime:
  requires_cli: false
 requires:
  speckit_version: ">=0.1.0"
 tags: ['ide', 'cursor']
 command_registration:
  commands_dir: ".cursor/commands"
  format: "markdown"
  arg_placeholder: "$ARGUMENTS"
  file_extension: ".md"
--- a/src/specify_cli/core_pack/agents/gemini/init.py
+++ b/src/specify_cli/core_pack/agents/gemini/init.py
--- a/src/specify_cli/core_pack/agents/gemini/bootstrap.py
+++ b/src/specify_cli/core_pack/agents/gemini/bootstrap.py
@@ -1,30 +0,0 @@
 """Bootstrap module for Gemini CLI agent pack."""
 from pathlib import Path
 from typing import Any, Dict, List, Optional
 from specify_cli.agent_pack import AgentBootstrap, remove_tracked_files
 class Gemini(AgentBootstrap):
    """Bootstrap for Gemini CLI."""
    AGENT_DIR = ".gemini"
    COMMANDS_SUBDIR = "commands"
    def setup(self, project_path: Path, script_type: str, options: Dict[str, Any]) -> List[Path]:
        """Install Gemini CLI agent files into the project."""
        commands_dir = project_path / self.AGENT_DIR / self.COMMANDS_SUBDIR
        commands_dir.mkdir(parents=True, exist_ok=True)
        return self._scaffold_project(project_path, script_type)
    def teardown(self, project_path: Path, *, force: bool = False, files: Optional[Dict[str, str]] = None) -> List[str]:
        """Remove Gemini CLI agent files from the project.
        Only removes individual tracked files — directories are never
        deleted.  When *files* is provided, exactly those files are
        removed.  Otherwise the install manifest is consulted and
        ``AgentFileModifiedError`` is raised if any tracked file was
        modified and *force* is ``False``.
        """
        return remove_tracked_files(project_path, self.manifest.id, force=force, files=files)
--- a/src/specify_cli/core_pack/agents/gemini/speckit-agent.yml
+++ b/src/specify_cli/core_pack/agents/gemini/speckit-agent.yml
@@ -1,25 +0,0 @@
 schema_version: "1.0"
 agent:
  id: "gemini"
  name: "Gemini CLI"
  version: "1.0.0"
  description: "Google's Gemini CLI for AI-assisted development"
  author: "github"
  license: "MIT"
 runtime:
  requires_cli: true
  install_url: "https://github.com/google-gemini/gemini-cli"
  cli_tool: "gemini"
 requires:
  speckit_version: ">=0.1.0"
 tags: ['cli', 'google', 'gemini']
 command_registration:
  commands_dir: ".gemini/commands"
  format: "toml"
  arg_placeholder: "{{args}}"
  file_extension: ".toml"
--- a/src/specify_cli/core_pack/agents/iflow/init.py
+++ b/src/specify_cli/core_pack/agents/iflow/init.py
--- a/src/specify_cli/core_pack/agents/iflow/bootstrap.py
+++ b/src/specify_cli/core_pack/agents/iflow/bootstrap.py
@@ -1,30 +0,0 @@
 """Bootstrap module for iFlow CLI agent pack."""
 from pathlib import Path
 from typing import Any, Dict, List, Optional
 from specify_cli.agent_pack import AgentBootstrap, remove_tracked_files
 class Iflow(AgentBootstrap):
    """Bootstrap for iFlow CLI."""
    AGENT_DIR = ".iflow"
    COMMANDS_SUBDIR = "commands"
    def setup(self, project_path: Path, script_type: str, options: Dict[str, Any]) -> List[Path]:
        """Install iFlow CLI agent files into the project."""
        commands_dir = project_path / self.AGENT_DIR / self.COMMANDS_SUBDIR
        commands_dir.mkdir(parents=True, exist_ok=True)
        return self._scaffold_project(project_path, script_type)
    def teardown(self, project_path: Path, *, force: bool = False, files: Optional[Dict[str, str]] = None) -> List[str]:
        """Remove iFlow CLI agent files from the project.
        Only removes individual tracked files — directories are never
        deleted.  When *files* is provided, exactly those files are
        removed.  Otherwise the install manifest is consulted and
        ``AgentFileModifiedError`` is raised if any tracked file was
        modified and *force* is ``False``.
        """
        return remove_tracked_files(project_path, self.manifest.id, force=force, files=files)
--- a/src/specify_cli/core_pack/agents/iflow/speckit-agent.yml
+++ b/src/specify_cli/core_pack/agents/iflow/speckit-agent.yml
@@ -1,25 +0,0 @@
 schema_version: "1.0"
 agent:
  id: "iflow"
  name: "iFlow CLI"
  version: "1.0.0"
  description: "iFlow CLI by iflow-ai for AI-assisted development"
  author: "github"
  license: "MIT"
 runtime:
  requires_cli: true
  install_url: "https://docs.iflow.cn/en/cli/quickstart"
  cli_tool: "iflow"
 requires:
  speckit_version: ">=0.1.0"
 tags: ['cli', 'iflow']
 command_registration:
  commands_dir: ".iflow/commands"
  format: "markdown"
  arg_placeholder: "$ARGUMENTS"
  file_extension: ".md"
--- a/src/specify_cli/core_pack/agents/junie/init.py
+++ b/src/specify_cli/core_pack/agents/junie/init.py
--- a/src/specify_cli/core_pack/agents/junie/bootstrap.py
+++ b/src/specify_cli/core_pack/agents/junie/bootstrap.py
@@ -1,30 +0,0 @@
 """Bootstrap module for Junie agent pack."""
 from pathlib import Path
 from typing import Any, Dict, List, Optional
 from specify_cli.agent_pack import AgentBootstrap, remove_tracked_files
 class Junie(AgentBootstrap):
    """Bootstrap for Junie."""
    AGENT_DIR = ".junie"
    COMMANDS_SUBDIR = "commands"
    def setup(self, project_path: Path, script_type: str, options: Dict[str, Any]) -> List[Path]:
        """Install Junie agent files into the project."""
        commands_dir = project_path / self.AGENT_DIR / self.COMMANDS_SUBDIR
        commands_dir.mkdir(parents=True, exist_ok=True)
        return self._scaffold_project(project_path, script_type)
    def teardown(self, project_path: Path, *, force: bool = False, files: Optional[Dict[str, str]] = None) -> List[str]:
        """Remove Junie agent files from the project.
        Only removes individual tracked files — directories are never
        deleted.  When *files* is provided, exactly those files are
        removed.  Otherwise the install manifest is consulted and
        ``AgentFileModifiedError`` is raised if any tracked file was
        modified and *force* is ``False``.
        """
        return remove_tracked_files(project_path, self.manifest.id, force=force, files=files)
--- a/src/specify_cli/core_pack/agents/junie/speckit-agent.yml
+++ b/src/specify_cli/core_pack/agents/junie/speckit-agent.yml
@@ -1,25 +0,0 @@
 schema_version: "1.0"
 agent:
  id: "junie"
  name: "Junie"
  version: "1.0.0"
  description: "Junie by JetBrains for AI-assisted development"
  author: "github"
  license: "MIT"
 runtime:
  requires_cli: true
  install_url: "https://junie.jetbrains.com/"
  cli_tool: "junie"
 requires:
  speckit_version: ">=0.1.0"
 tags: ['cli', 'jetbrains', 'junie']
 command_registration:
  commands_dir: ".junie/commands"
  format: "markdown"
  arg_placeholder: "$ARGUMENTS"
  file_extension: ".md"
--- a/src/specify_cli/core_pack/agents/kilocode/init.py
+++ b/src/specify_cli/core_pack/agents/kilocode/init.py
--- a/src/specify_cli/core_pack/agents/kilocode/bootstrap.py
+++ b/src/specify_cli/core_pack/agents/kilocode/bootstrap.py
@@ -1,30 +0,0 @@
 """Bootstrap module for Kilo Code agent pack."""
 from pathlib import Path
 from typing import Any, Dict, List, Optional
 from specify_cli.agent_pack import AgentBootstrap, remove_tracked_files
 class Kilocode(AgentBootstrap):
    """Bootstrap for Kilo Code."""
    AGENT_DIR = ".kilocode"
    COMMANDS_SUBDIR = "workflows"
    def setup(self, project_path: Path, script_type: str, options: Dict[str, Any]) -> List[Path]:
        """Install Kilo Code agent files into the project."""
        commands_dir = project_path / self.AGENT_DIR / self.COMMANDS_SUBDIR
        commands_dir.mkdir(parents=True, exist_ok=True)
        return self._scaffold_project(project_path, script_type)
    def teardown(self, project_path: Path, *, force: bool = False, files: Optional[Dict[str, str]] = None) -> List[str]:
        """Remove Kilo Code agent files from the project.
        Only removes individual tracked files — directories are never
        deleted.  When *files* is provided, exactly those files are
        removed.  Otherwise the install manifest is consulted and
        ``AgentFileModifiedError`` is raised if any tracked file was
        modified and *force* is ``False``.
        """
        return remove_tracked_files(project_path, self.manifest.id, force=force, files=files)
--- a/src/specify_cli/core_pack/agents/kilocode/speckit-agent.yml
+++ b/src/specify_cli/core_pack/agents/kilocode/speckit-agent.yml
@@ -1,23 +0,0 @@
 schema_version: "1.0"
 agent:
  id: "kilocode"
  name: "Kilo Code"
  version: "1.0.0"
  description: "Kilo Code IDE for AI-assisted development"
  author: "github"
  license: "MIT"
 runtime:
  requires_cli: false
 requires:
  speckit_version: ">=0.1.0"
 tags: ['ide', 'kilocode']
 command_registration:
  commands_dir: ".kilocode/workflows"
  format: "markdown"
  arg_placeholder: "$ARGUMENTS"
  file_extension: ".md"
--- a/src/specify_cli/core_pack/agents/kimi/init.py
+++ b/src/specify_cli/core_pack/agents/kimi/init.py
--- a/src/specify_cli/core_pack/agents/kimi/bootstrap.py
+++ b/src/specify_cli/core_pack/agents/kimi/bootstrap.py
@@ -1,30 +0,0 @@
 """Bootstrap module for Kimi Code agent pack."""
 from pathlib import Path
 from typing import Any, Dict, List, Optional
 from specify_cli.agent_pack import AgentBootstrap, remove_tracked_files
 class Kimi(AgentBootstrap):
    """Bootstrap for Kimi Code."""
    AGENT_DIR = ".kimi"
    COMMANDS_SUBDIR = "skills"
    def setup(self, project_path: Path, script_type: str, options: Dict[str, Any]) -> List[Path]:
        """Install Kimi Code agent files into the project."""
        commands_dir = project_path / self.AGENT_DIR / self.COMMANDS_SUBDIR
        commands_dir.mkdir(parents=True, exist_ok=True)
        return self._scaffold_project(project_path, script_type)
    def teardown(self, project_path: Path, *, force: bool = False, files: Optional[Dict[str, str]] = None) -> List[str]:
        """Remove Kimi Code agent files from the project.
        Only removes individual tracked files — directories are never
        deleted.  When *files* is provided, exactly those files are
        removed.  Otherwise the install manifest is consulted and
        ``AgentFileModifiedError`` is raised if any tracked file was
        modified and *force* is ``False``.
        """
        return remove_tracked_files(project_path, self.manifest.id, force=force, files=files)
--- a/src/specify_cli/core_pack/agents/kimi/speckit-agent.yml
+++ b/src/specify_cli/core_pack/agents/kimi/speckit-agent.yml
@@ -1,25 +0,0 @@
 schema_version: "1.0"
 agent:
  id: "kimi"
  name: "Kimi Code"
  version: "1.0.0"
  description: "Kimi Code CLI by Moonshot AI with skills support"
  author: "github"
  license: "MIT"
 runtime:
  requires_cli: true
  install_url: "https://code.kimi.com/"
  cli_tool: "kimi"
 requires:
  speckit_version: ">=0.1.0"
 tags: ['cli', 'moonshot', 'kimi', 'skills']
 command_registration:
  commands_dir: ".kimi/skills"
  format: "markdown"
  arg_placeholder: "$ARGUMENTS"
  file_extension: "/SKILL.md"
--- a/src/specify_cli/core_pack/agents/kiro-cli/init.py
+++ b/src/specify_cli/core_pack/agents/kiro-cli/init.py
--- a/src/specify_cli/core_pack/agents/kiro-cli/bootstrap.py
+++ b/src/specify_cli/core_pack/agents/kiro-cli/bootstrap.py
@@ -1,30 +0,0 @@
 """Bootstrap module for Kiro CLI agent pack."""
 from pathlib import Path
 from typing import Any, Dict, List, Optional
 from specify_cli.agent_pack import AgentBootstrap, remove_tracked_files
 class KiroCli(AgentBootstrap):
    """Bootstrap for Kiro CLI."""
    AGENT_DIR = ".kiro"
    COMMANDS_SUBDIR = "prompts"
    def setup(self, project_path: Path, script_type: str, options: Dict[str, Any]) -> List[Path]:
        """Install Kiro CLI agent files into the project."""
        commands_dir = project_path / self.AGENT_DIR / self.COMMANDS_SUBDIR
        commands_dir.mkdir(parents=True, exist_ok=True)
        return self._scaffold_project(project_path, script_type)
    def teardown(self, project_path: Path, *, force: bool = False, files: Optional[Dict[str, str]] = None) -> List[str]:
        """Remove Kiro CLI agent files from the project.
        Only removes individual tracked files — directories are never
        deleted.  When *files* is provided, exactly those files are
        removed.  Otherwise the install manifest is consulted and
        ``AgentFileModifiedError`` is raised if any tracked file was
        modified and *force* is ``False``.
        """
        return remove_tracked_files(project_path, self.manifest.id, force=force, files=files)
--- a/src/specify_cli/core_pack/agents/kiro-cli/speckit-agent.yml
+++ b/src/specify_cli/core_pack/agents/kiro-cli/speckit-agent.yml
@@ -1,25 +0,0 @@
 schema_version: "1.0"
 agent:
  id: "kiro-cli"
  name: "Kiro CLI"
  version: "1.0.0"
  description: "Kiro CLI by Amazon for AI-assisted development"
  author: "github"
  license: "MIT"
 runtime:
  requires_cli: true
  install_url: "https://kiro.dev/docs/cli/"
  cli_tool: "kiro-cli"
 requires:
  speckit_version: ">=0.1.0"
 tags: ['cli', 'amazon', 'kiro']
 command_registration:
  commands_dir: ".kiro/prompts"
  format: "markdown"
  arg_placeholder: "$ARGUMENTS"
  file_extension: ".md"
--- a/src/specify_cli/core_pack/agents/opencode/init.py
+++ b/src/specify_cli/core_pack/agents/opencode/init.py
--- a/src/specify_cli/core_pack/agents/opencode/bootstrap.py
+++ b/src/specify_cli/core_pack/agents/opencode/bootstrap.py
@@ -1,30 +0,0 @@
 """Bootstrap module for opencode agent pack."""
 from pathlib import Path
 from typing import Any, Dict, List, Optional
 from specify_cli.agent_pack import AgentBootstrap, remove_tracked_files
 class Opencode(AgentBootstrap):
    """Bootstrap for opencode."""
    AGENT_DIR = ".opencode"
    COMMANDS_SUBDIR = "command"
    def setup(self, project_path: Path, script_type: str, options: Dict[str, Any]) -> List[Path]:
        """Install opencode agent files into the project."""
        commands_dir = project_path / self.AGENT_DIR / self.COMMANDS_SUBDIR
        commands_dir.mkdir(parents=True, exist_ok=True)
        return self._scaffold_project(project_path, script_type)
    def teardown(self, project_path: Path, *, force: bool = False, files: Optional[Dict[str, str]] = None) -> List[str]:
        """Remove opencode agent files from the project.
        Only removes individual tracked files — directories are never
        deleted.  When *files* is provided, exactly those files are
        removed.  Otherwise the install manifest is consulted and
        ``AgentFileModifiedError`` is raised if any tracked file was
        modified and *force* is ``False``.
        """
        return remove_tracked_files(project_path, self.manifest.id, force=force, files=files)
--- a/src/specify_cli/core_pack/agents/opencode/speckit-agent.yml
+++ b/src/specify_cli/core_pack/agents/opencode/speckit-agent.yml
@@ -1,25 +0,0 @@
 schema_version: "1.0"
 agent:
  id: "opencode"
  name: "opencode"
  version: "1.0.0"
  description: "opencode CLI for AI-assisted development"
  author: "github"
  license: "MIT"
 runtime:
  requires_cli: true
  install_url: "https://opencode.ai"
  cli_tool: "opencode"
 requires:
  speckit_version: ">=0.1.0"
 tags: ['cli', 'opencode']
 command_registration:
  commands_dir: ".opencode/command"
  format: "markdown"
  arg_placeholder: "$ARGUMENTS"
  file_extension: ".md"
--- a/src/specify_cli/core_pack/agents/pi/init.py
+++ b/src/specify_cli/core_pack/agents/pi/init.py
--- a/src/specify_cli/core_pack/agents/pi/bootstrap.py
+++ b/src/specify_cli/core_pack/agents/pi/bootstrap.py
@@ -1,30 +0,0 @@
 """Bootstrap module for Pi Coding Agent agent pack."""
 from pathlib import Path
 from typing import Any, Dict, List, Optional
 from specify_cli.agent_pack import AgentBootstrap, remove_tracked_files
 class Pi(AgentBootstrap):
    """Bootstrap for Pi Coding Agent."""
    AGENT_DIR = ".pi"
    COMMANDS_SUBDIR = "prompts"
    def setup(self, project_path: Path, script_type: str, options: Dict[str, Any]) -> List[Path]:
        """Install Pi Coding Agent agent files into the project."""
        commands_dir = project_path / self.AGENT_DIR / self.COMMANDS_SUBDIR
        commands_dir.mkdir(parents=True, exist_ok=True)
        return self._scaffold_project(project_path, script_type)
    def teardown(self, project_path: Path, *, force: bool = False, files: Optional[Dict[str, str]] = None) -> List[str]:
        """Remove Pi Coding Agent agent files from the project.
        Only removes individual tracked files — directories are never
        deleted.  When *files* is provided, exactly those files are
        removed.  Otherwise the install manifest is consulted and
        ``AgentFileModifiedError`` is raised if any tracked file was
        modified and *force* is ``False``.
        """
        return remove_tracked_files(project_path, self.manifest.id, force=force, files=files)
--- a/src/specify_cli/core_pack/agents/pi/speckit-agent.yml
+++ b/src/specify_cli/core_pack/agents/pi/speckit-agent.yml
@@ -1,25 +0,0 @@
 schema_version: "1.0"
 agent:
  id: "pi"
  name: "Pi Coding Agent"
  version: "1.0.0"
  description: "Pi terminal coding agent for AI-assisted development"
  author: "github"
  license: "MIT"
 runtime:
  requires_cli: true
  install_url: "https://www.npmjs.com/package/@mariozechner/pi-coding-agent"
  cli_tool: "pi"
 requires:
  speckit_version: ">=0.1.0"
 tags: ['cli', 'pi']
 command_registration:
  commands_dir: ".pi/prompts"
  format: "markdown"
  arg_placeholder: "$ARGUMENTS"
  file_extension: ".md"
--- a/src/specify_cli/core_pack/agents/qodercli/init.py
+++ b/src/specify_cli/core_pack/agents/qodercli/init.py
--- a/src/specify_cli/core_pack/agents/qodercli/bootstrap.py
+++ b/src/specify_cli/core_pack/agents/qodercli/bootstrap.py
@@ -1,30 +0,0 @@
 """Bootstrap module for Qoder CLI agent pack."""
 from pathlib import Path
 from typing import Any, Dict, List, Optional
 from specify_cli.agent_pack import AgentBootstrap, remove_tracked_files
 class Qodercli(AgentBootstrap):
    """Bootstrap for Qoder CLI."""
    AGENT_DIR = ".qoder"
    COMMANDS_SUBDIR = "commands"
    def setup(self, project_path: Path, script_type: str, options: Dict[str, Any]) -> List[Path]:
        """Install Qoder CLI agent files into the project."""
        commands_dir = project_path / self.AGENT_DIR / self.COMMANDS_SUBDIR
        commands_dir.mkdir(parents=True, exist_ok=True)
        return self._scaffold_project(project_path, script_type)
    def teardown(self, project_path: Path, *, force: bool = False, files: Optional[Dict[str, str]] = None) -> List[str]:
        """Remove Qoder CLI agent files from the project.
        Only removes individual tracked files — directories are never
        deleted.  When *files* is provided, exactly those files are
        removed.  Otherwise the install manifest is consulted and
        ``AgentFileModifiedError`` is raised if any tracked file was
        modified and *force* is ``False``.
        """
        return remove_tracked_files(project_path, self.manifest.id, force=force, files=files)
--- a/src/specify_cli/core_pack/agents/qodercli/speckit-agent.yml
+++ b/src/specify_cli/core_pack/agents/qodercli/speckit-agent.yml
@@ -1,25 +0,0 @@
 schema_version: "1.0"
 agent:
  id: "qodercli"
  name: "Qoder CLI"
  version: "1.0.0"
  description: "Qoder CLI for AI-assisted development"
  author: "github"
  license: "MIT"
 runtime:
  requires_cli: true
  install_url: "https://qoder.com/cli"
  cli_tool: "qodercli"
 requires:
  speckit_version: ">=0.1.0"
 tags: ['cli', 'qoder']
 command_registration:
  commands_dir: ".qoder/commands"
  format: "markdown"
  arg_placeholder: "$ARGUMENTS"
  file_extension: ".md"
--- a/src/specify_cli/core_pack/agents/qwen/init.py
+++ b/src/specify_cli/core_pack/agents/qwen/init.py
--- a/src/specify_cli/core_pack/agents/qwen/bootstrap.py
+++ b/src/specify_cli/core_pack/agents/qwen/bootstrap.py
@@ -1,30 +0,0 @@
 """Bootstrap module for Qwen Code agent pack."""
 from pathlib import Path
 from typing import Any, Dict, List, Optional
 from specify_cli.agent_pack import AgentBootstrap, remove_tracked_files
 class Qwen(AgentBootstrap):
    """Bootstrap for Qwen Code."""
    AGENT_DIR = ".qwen"
    COMMANDS_SUBDIR = "commands"
    def setup(self, project_path: Path, script_type: str, options: Dict[str, Any]) -> List[Path]:
        """Install Qwen Code agent files into the project."""
        commands_dir = project_path / self.AGENT_DIR / self.COMMANDS_SUBDIR
        commands_dir.mkdir(parents=True, exist_ok=True)
        return self._scaffold_project(project_path, script_type)
    def teardown(self, project_path: Path, *, force: bool = False, files: Optional[Dict[str, str]] = None) -> List[str]:
        """Remove Qwen Code agent files from the project.
        Only removes individual tracked files — directories are never
        deleted.  When *files* is provided, exactly those files are
        removed.  Otherwise the install manifest is consulted and
        ``AgentFileModifiedError`` is raised if any tracked file was
        modified and *force* is ``False``.
        """
        return remove_tracked_files(project_path, self.manifest.id, force=force, files=files)
--- a/src/specify_cli/core_pack/agents/qwen/speckit-agent.yml
+++ b/src/specify_cli/core_pack/agents/qwen/speckit-agent.yml
@@ -1,25 +0,0 @@
 schema_version: "1.0"
 agent:
  id: "qwen"
  name: "Qwen Code"
  version: "1.0.0"
  description: "Alibaba's Qwen Code CLI for AI-assisted development"
  author: "github"
  license: "MIT"
 runtime:
  requires_cli: true
  install_url: "https://github.com/QwenLM/qwen-code"
  cli_tool: "qwen"
 requires:
  speckit_version: ">=0.1.0"
 tags: ['cli', 'alibaba', 'qwen']
 command_registration:
  commands_dir: ".qwen/commands"
  format: "markdown"
  arg_placeholder: "$ARGUMENTS"
  file_extension: ".md"
--- a/src/specify_cli/core_pack/agents/roo/init.py
+++ b/src/specify_cli/core_pack/agents/roo/init.py
--- a/src/specify_cli/core_pack/agents/roo/bootstrap.py
+++ b/src/specify_cli/core_pack/agents/roo/bootstrap.py
@@ -1,30 +0,0 @@
 """Bootstrap module for Roo Code agent pack."""
 from pathlib import Path
 from typing import Any, Dict, List, Optional
 from specify_cli.agent_pack import AgentBootstrap, remove_tracked_files
 class Roo(AgentBootstrap):
    """Bootstrap for Roo Code."""
    AGENT_DIR = ".roo"
    COMMANDS_SUBDIR = "commands"
    def setup(self, project_path: Path, script_type: str, options: Dict[str, Any]) -> List[Path]:
        """Install Roo Code agent files into the project."""
        commands_dir = project_path / self.AGENT_DIR / self.COMMANDS_SUBDIR
        commands_dir.mkdir(parents=True, exist_ok=True)
        return self._scaffold_project(project_path, script_type)
    def teardown(self, project_path: Path, *, force: bool = False, files: Optional[Dict[str, str]] = None) -> List[str]:
        """Remove Roo Code agent files from the project.
        Only removes individual tracked files — directories are never
        deleted.  When *files* is provided, exactly those files are
        removed.  Otherwise the install manifest is consulted and
        ``AgentFileModifiedError`` is raised if any tracked file was
        modified and *force* is ``False``.
        """
        return remove_tracked_files(project_path, self.manifest.id, force=force, files=files)
--- a/src/specify_cli/core_pack/agents/roo/speckit-agent.yml
+++ b/src/specify_cli/core_pack/agents/roo/speckit-agent.yml
@@ -1,23 +0,0 @@
 schema_version: "1.0"
 agent:
  id: "roo"
  name: "Roo Code"
  version: "1.0.0"
  description: "Roo Code IDE for AI-assisted development"
  author: "github"
  license: "MIT"
 runtime:
  requires_cli: false
 requires:
  speckit_version: ">=0.1.0"
 tags: ['ide', 'roo']
 command_registration:
  commands_dir: ".roo/commands"
  format: "markdown"
  arg_placeholder: "$ARGUMENTS"
  file_extension: ".md"
--- a/src/specify_cli/core_pack/agents/shai/init.py
+++ b/src/specify_cli/core_pack/agents/shai/init.py
--- a/src/specify_cli/core_pack/agents/shai/bootstrap.py
+++ b/src/specify_cli/core_pack/agents/shai/bootstrap.py
@@ -1,30 +0,0 @@
 """Bootstrap module for SHAI agent pack."""
 from pathlib import Path
 from typing import Any, Dict, List, Optional
 from specify_cli.agent_pack import AgentBootstrap, remove_tracked_files
 class Shai(AgentBootstrap):
    """Bootstrap for SHAI."""
    AGENT_DIR = ".shai"
    COMMANDS_SUBDIR = "commands"
    def setup(self, project_path: Path, script_type: str, options: Dict[str, Any]) -> List[Path]:
        """Install SHAI agent files into the project."""
        commands_dir = project_path / self.AGENT_DIR / self.COMMANDS_SUBDIR
        commands_dir.mkdir(parents=True, exist_ok=True)
        return self._scaffold_project(project_path, script_type)
    def teardown(self, project_path: Path, *, force: bool = False, files: Optional[Dict[str, str]] = None) -> List[str]:
        """Remove SHAI agent files from the project.
        Only removes individual tracked files — directories are never
        deleted.  When *files* is provided, exactly those files are
        removed.  Otherwise the install manifest is consulted and
        ``AgentFileModifiedError`` is raised if any tracked file was
        modified and *force* is ``False``.
        """
        return remove_tracked_files(project_path, self.manifest.id, force=force, files=files)
--- a/src/specify_cli/core_pack/agents/shai/speckit-agent.yml
+++ b/src/specify_cli/core_pack/agents/shai/speckit-agent.yml
@@ -1,25 +0,0 @@
 schema_version: "1.0"
 agent:
  id: "shai"
  name: "SHAI"
  version: "1.0.0"
  description: "SHAI CLI for AI-assisted development"
  author: "github"
  license: "MIT"
 runtime:
  requires_cli: true
  install_url: "https://github.com/ovh/shai"
  cli_tool: "shai"
 requires:
  speckit_version: ">=0.1.0"
 tags: ['cli', 'ovh', 'shai']
 command_registration:
  commands_dir: ".shai/commands"
  format: "markdown"
  arg_placeholder: "$ARGUMENTS"
  file_extension: ".md"
--- a/src/specify_cli/core_pack/agents/tabnine/init.py
+++ b/src/specify_cli/core_pack/agents/tabnine/init.py
--- a/src/specify_cli/core_pack/agents/tabnine/bootstrap.py
+++ b/src/specify_cli/core_pack/agents/tabnine/bootstrap.py
@@ -1,30 +0,0 @@
 """Bootstrap module for Tabnine CLI agent pack."""
 from pathlib import Path
 from typing import Any, Dict, List, Optional
 from specify_cli.agent_pack import AgentBootstrap, remove_tracked_files
 class Tabnine(AgentBootstrap):
    """Bootstrap for Tabnine CLI."""
    AGENT_DIR = ".tabnine/agent"
    COMMANDS_SUBDIR = "commands"
    def setup(self, project_path: Path, script_type: str, options: Dict[str, Any]) -> List[Path]:
        """Install Tabnine CLI agent files into the project."""
        commands_dir = project_path / self.AGENT_DIR / self.COMMANDS_SUBDIR
        commands_dir.mkdir(parents=True, exist_ok=True)
        return self._scaffold_project(project_path, script_type)
    def teardown(self, project_path: Path, *, force: bool = False, files: Optional[Dict[str, str]] = None) -> List[str]:
        """Remove Tabnine CLI agent files from the project.
        Only removes individual tracked files — directories are never
        deleted.  When *files* is provided, exactly those files are
        removed.  Otherwise the install manifest is consulted and
        ``AgentFileModifiedError`` is raised if any tracked file was
        modified and *force* is ``False``.
        """
        return remove_tracked_files(project_path, self.manifest.id, force=force, files=files)
--- a/Show More
+++ b/Show More
Author	SHA1	Message	Date
Manfred Riem	9b10d440b1	Potential fix for pull request finding Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com>	2026-03-13 15:14:46 -05:00
github-actions[bot]	2656ee1df7	chore: bump version to 0.3.0	2026-03-13 20:11:58 +00:00