Merge pull request #176 from eyaltoledano/changeset-release/main

Version Packages

.changeset/fifty-squids-wear.md

@@ -1,5 +0,0 @@
----
-"task-master-ai": patch
----
-
-Add CI for testing

.changeset/red-lights-mix.md

@@ -1,5 +0,0 @@
----
-"task-master-ai": patch
----
-
-Fix github actions creating npm releases on next branch push

.changeset/two-bats-smoke.md

@@ -1,302 +0,0 @@
----
-"task-master-ai": patch
----
-
-- Adjusts the MCP server invokation in the mcp.json we ship with `task-master init`. Fully functional now.
-- Rename the npx -y command. It's now `npx -y task-master-ai task-master-mcp`
-- Add additional binary alias: `task-master-mcp-server` pointing to the same MCP server script
-
-- **Significant improvements to model configuration:**
-  - Increase context window from 64k to 128k tokens (MAX_TOKENS=128000) for handling larger codebases
-  - Reduce temperature from 0.4 to 0.2 for more consistent, deterministic outputs
-  - Set default model to "claude-3-7-sonnet-20250219" in configuration
-  - Update Perplexity model to "sonar-pro" for research operations
-  - Increase default subtasks generation from 4 to 5 for more granular task breakdown
-  - Set consistent default priority to "medium" for all new tasks
-
-- **Clarify environment configuration approaches:**
-  - For direct MCP usage: Configure API keys directly in `.cursor/mcp.json`
-  - For npm package usage: Configure API keys in `.env` file
-  - Update templates with clearer placeholder values and formatting
-  - Provide explicit documentation about configuration methods in both environments
-  - Use consistent placeholder format "YOUR_ANTHROPIC_API_KEY_HERE" in mcp.json
-
-- Rename MCP tools to better align with API conventions and natural language in client chat:
-  - Rename `list-tasks` to `get-tasks` for more intuitive client requests like "get my tasks"
-  - Rename `show-task` to `get-task` for consistency with GET-based API naming conventions
-
-- **Refine AI-based MCP tool implementation patterns:**
-  - Establish clear responsibilities for direct functions vs MCP tools when handling AI operations
-  - Update MCP direct function signatures to expect `context = { session }` for AI-based tools, without `reportProgress`
-  - Clarify that AI client initialization, API calls, and response parsing should be handled within the direct function
-  - Define standard error codes for AI operations (`AI_CLIENT_ERROR`, `RESPONSE_PARSING_ERROR`, etc.)
-  - Document that `reportProgress` should not be used within direct functions due to client validation issues
-  - Establish that progress indication within direct functions should use standard logging (`log.info()`)
-  - Clarify that `AsyncOperationManager` should manage progress reporting at the MCP tool layer, not in direct functions
-  - Update `mcp.mdc` rule to reflect the refined patterns for AI-based MCP tools
-  - **Document and implement the Logger Wrapper Pattern:**
-    - Add comprehensive documentation in `mcp.mdc` and `utilities.mdc` on the Logger Wrapper Pattern
-    - Explain the dual purpose of the wrapper: preventing runtime errors and controlling output format
-    - Include implementation examples with detailed explanations of why and when to use this pattern
-    - Clearly document that this pattern has proven successful in resolving issues in multiple MCP tools
-    - Cross-reference between rule files to ensure consistent guidance
-  - **Fix critical issue in `analyze-project-complexity` MCP tool:**
-    - Implement proper logger wrapper in `analyzeTaskComplexityDirect` to fix `mcpLog[level] is not a function` errors
-    - Update direct function to handle both Perplexity and Claude AI properly for research-backed analysis
-    - Improve silent mode handling with proper wasSilent state tracking
-    - Add comprehensive error handling for AI client errors and report file parsing
-    - Ensure proper report format detection and analysis with fallbacks
-    - Fix variable name conflicts between the `report` logging function and data structures in `analyzeTaskComplexity`
-  - **Fix critical issue in `update-task` MCP tool:**
-    - Implement proper logger wrapper in `updateTaskByIdDirect` to ensure mcpLog[level] calls work correctly
-    - Update Zod schema in `update-task.js` to accept both string and number type IDs
-    - Fix silent mode implementation with proper try/finally blocks
-    - Add comprehensive error handling for missing parameters, invalid task IDs, and failed updates
-  - **Refactor `update-subtask` MCP tool to follow established patterns:**
-    - Update `updateSubtaskByIdDirect` function to accept `context = { session }` parameter
-    - Add proper AI client initialization with error handling for both Anthropic and Perplexity
-    - Implement the Logger Wrapper Pattern to prevent mcpLog[level] errors
-    - Support both string and number subtask IDs with appropriate validation
-    - Update MCP tool to pass session to direct function but not reportProgress
-    - Remove commented-out calls to reportProgress for cleaner code
-    - Add comprehensive error handling for various failure scenarios
-    - Implement proper silent mode with try/finally blocks
-    - Ensure detailed successful update response information
-  - **Fix issues in `set-task-status` MCP tool:**
-    - Remove reportProgress parameter as it's not needed
-    - Improve project root handling for better session awareness
-    - Reorganize function call arguments for setTaskStatusDirect
-    - Add proper silent mode handling with try/catch/finally blocks
-    - Enhance logging for both success and error cases
-  - **Refactor `update` MCP tool to follow established patterns:**
-    - Update `updateTasksDirect` function to accept `context = { session }` parameter
-    - Add proper AI client initialization with error handling
-    - Update MCP tool to pass session to direct function but not reportProgress
-    - Simplify parameter validation using string type for 'from' parameter
-    - Improve error handling for AI client errors
-    - Implement proper silent mode handling with try/finally blocks
-    - Use `isSilentMode()` function instead of accessing global variables directly
-  - **Refactor `expand-task` MCP tool to follow established patterns:**
-    - Update `expandTaskDirect` function to accept `context = { session }` parameter
-    - Add proper AI client initialization with error handling
-    - Update MCP tool to pass session to direct function but not reportProgress
-    - Add comprehensive tests for the refactored implementation
-    - Improve error handling for AI client errors
-    - Remove non-existent 'force' parameter from direct function implementation
-    - Ensure direct function parameters match core function parameters
-    - Implement proper silent mode handling with try/finally blocks
-    - Use `isSilentMode()` function instead of accessing global variables directly
-  - **Refactor `parse-prd` MCP tool to follow established patterns:**
-    - Update `parsePRDDirect` function to accept `context = { session }` parameter for proper AI initialization
-    - Implement AI client initialization with proper error handling using `getAnthropicClientForMCP`
-    - Add the Logger Wrapper Pattern to ensure proper logging via `mcpLog`
-    - Update the core `parsePRD` function to accept an AI client parameter
-    - Implement proper silent mode handling with try/finally blocks
-    - Remove `reportProgress` usage from MCP tool for better client compatibility
-    - Fix console output that was breaking the JSON response format
-    - Improve error handling with specific error codes
-    - Pass session object to the direct function correctly
-    - Update task-manager-core.js to export AI client utilities for better organization
-    - Ensure proper option passing between functions to maintain logging context
-
-- **Update MCP Logger to respect silent mode:**
-  - Import and check `isSilentMode()` function in logger implementation
-  - Skip all logging when silent mode is enabled
-  - Prevent console output from interfering with JSON responses
-  - Fix "Unexpected token 'I', "[INFO] Gene"... is not valid JSON" errors by suppressing log output during silent mode
-
-- **Refactor `expand-all` MCP tool to follow established patterns:**
-    - Update `expandAllTasksDirect` function to accept `context = { session }` parameter
-    - Add proper AI client initialization with error handling for research-backed expansion
-    - Pass session to direct function but not reportProgress in the MCP tool
-    - Implement directory switching to work around core function limitations
-    - Add comprehensive error handling with specific error codes
-    - Ensure proper restoration of working directory after execution
-    - Use try/finally pattern for both silent mode and directory management
-    - Add comprehensive tests for the refactored implementation
-
-- **Standardize and improve silent mode implementation across MCP direct functions:**
-  - Add proper import of all silent mode utilities: `import { enableSilentMode, disableSilentMode, isSilentMode } from 'utils.js'`
-  - Replace direct access to global silentMode variable with `isSilentMode()` function calls
-  - Implement consistent try/finally pattern to ensure silent mode is always properly disabled
-  - Add error handling with finally blocks to prevent silent mode from remaining enabled after errors
-  - Create proper mixed parameter/global silent mode check pattern: `const isSilent = options.silentMode || (typeof options.silentMode === 'undefined' && isSilentMode())`
-  - Update all direct functions to follow the new implementation pattern
-  - Fix issues with silent mode not being properly disabled when errors occur
-
-- **Improve parameter handling between direct functions and core functions:**
-  - Verify direct function parameters match core function signatures
-  - Remove extraction and use of parameters that don't exist in core functions (e.g., 'force')
-  - Implement appropriate type conversion for parameters (e.g., `parseInt(args.id, 10)`)
-  - Set defaults that match core function expectations
-  - Add detailed documentation on parameter matching in guidelines
-  - Add explicit examples of correct parameter handling patterns
-
-- **Create standardized MCP direct function implementation checklist:**
-  - Comprehensive imports and dependencies section
-  - Parameter validation and matching guidelines
-  - Silent mode implementation best practices
-  - Error handling and response format patterns
-  - Path resolution and core function call guidelines
-  - Function export and testing verification steps
-  - Specific issues to watch for related to silent mode, parameters, and error cases
-  - Add checklist to subtasks for uniform implementation across all direct functions
-
-- **Implement centralized AI client utilities for MCP tools:**
-  - Create new `ai-client-utils.js` module with standardized client initialization functions
-  - Implement session-aware AI client initialization for both Anthropic and Perplexity
-  - Add comprehensive error handling with user-friendly error messages
-  - Create intelligent AI model selection based on task requirements
-  - Implement model configuration utilities that respect session environment variables
-  - Add extensive unit tests for all utility functions
-  - Significantly improve MCP tool reliability for AI operations
-  - **Specific implementations include:**
-    - `getAnthropicClientForMCP`: Initializes Anthropic client with session environment variables
-    - `getPerplexityClientForMCP`: Initializes Perplexity client with session environment variables
-    - `getModelConfig`: Retrieves model parameters from session or fallbacks to defaults
-    - `getBestAvailableAIModel`: Selects the best available model based on requirements
-    - `handleClaudeError`: Processes Claude API errors into user-friendly messages
-  - **Updated direct functions to use centralized AI utilities:**
-    - Refactored `addTaskDirect` to use the new AI client utilities with proper AsyncOperationManager integration
-    - Implemented comprehensive error handling for API key validation, AI processing, and response parsing
-    - Added session-aware parameter handling with proper propagation of context to AI streaming functions
-    - Ensured proper fallback to process.env when session variables aren't available
-
-- **Refine AI services for reusable operations:**
-  - Refactor `ai-services.js` to support consistent AI operations across CLI and MCP
-  - Implement shared helpers for streaming responses, prompt building, and response parsing
-  - Standardize client initialization patterns with proper session parameter handling
-  - Enhance error handling and loading indicator management
-  - Fix process exit issues to prevent MCP server termination on API errors
-  - Ensure proper resource cleanup in all execution paths
-  - Add comprehensive test coverage for AI service functions
-  - **Key improvements include:**
-    - Stream processing safety with explicit completion detection
-    - Standardized function parameter patterns
-    - Session-aware parameter extraction with sensible defaults
-    - Proper cleanup using try/catch/finally patterns
-
-- **Optimize MCP response payloads:**
-  - Add custom `processTaskResponse` function to `get-task` MCP tool to filter out unnecessary `allTasks` array data
-  - Significantly reduce response size by returning only the specific requested task instead of all tasks
-  - Preserve dependency status relationships for the UI/CLI while keeping MCP responses lean and efficient
-
-- **Implement complete remove-task functionality:**
-  - Add `removeTask` core function to permanently delete tasks or subtasks from tasks.json
-  - Implement CLI command `remove-task` with confirmation prompt and force flag support
-  - Create MCP `remove_task` tool for AI-assisted task removal
-  - Automatically handle dependency cleanup by removing references to deleted tasks
-  - Update task files after removal to maintain consistency
-  - Provide robust error handling and detailed feedback messages
-
-- **Update Cursor rules and documentation:**
-  - Enhance `new_features.mdc` with comprehensive guidelines for implementing removal commands
-  - Update `commands.mdc` with best practices for confirmation flows and cleanup procedures
-  - Expand `mcp.mdc` with detailed instructions for MCP tool implementation patterns
-  - Add examples of proper error handling and parameter validation to all relevant rules
-  - Include new sections about handling dependencies during task removal operations
-  - Document naming conventions and implementation patterns for destructive operations
-  - Update silent mode implementation documentation with proper examples
-  - Add parameter handling guidelines emphasizing matching with core functions
-  - Update architecture documentation with dedicated section on silent mode implementation
-
-- **Implement silent mode across all direct functions:**
-  - Add `enableSilentMode` and `disableSilentMode` utility imports to all direct function files
-  - Wrap all core function calls with silent mode to prevent console logs from interfering with JSON responses
-  - Add comprehensive error handling to ensure silent mode is disabled even when errors occur
-  - Fix "Unexpected token 'I', "[INFO] Gene"... is not valid JSON" errors by suppressing log output
-  - Apply consistent silent mode pattern across all MCP direct functions
-  - Maintain clean JSON responses for better integration with client tools
-
-- **Implement AsyncOperationManager for background task processing:**
-  - Add new `async-manager.js` module to handle long-running operations asynchronously
-  - Support background execution of computationally intensive tasks like expansion and analysis
-  - Implement unique operation IDs with UUID generation for reliable tracking
-  - Add operation status tracking (pending, running, completed, failed)
-  - Create `get_operation_status` MCP tool to check on background task progress
-  - Forward progress reporting from background tasks to the client
-  - Implement operation history with automatic cleanup of completed operations
-  - Support proper error handling in background tasks with detailed status reporting
-  - Maintain context (log, session) for background operations ensuring consistent behavior
-
-- **Implement initialize_project command:**
-  - Add new MCP tool to allow project setup via integrated MCP clients
-  - Create `initialize_project` direct function with proper parameter handling
-  - Improve onboarding experience by adding to mcp.json configuration
-  - Support project-specific metadata like name, description, and version
-  - Handle shell alias creation with proper confirmation
-  - Improve first-time user experience in AI environments
-
-- **Refactor project root handling for MCP Server:**
-  - **Prioritize Session Roots**: MCP tools now extract the project root path directly from `session.roots[0].uri` provided by the client (e.g., Cursor).
-  - **New Utility `getProjectRootFromSession`**: Added to `mcp-server/src/tools/utils.js` to encapsulate session root extraction and decoding. **Further refined for more reliable detection, especially in integrated environments, including deriving root from script path and avoiding fallback to '/'.**
-  - **Simplify `findTasksJsonPath`**: The core path finding utility in `mcp-server/src/core/utils/path-utils.js` now prioritizes the `projectRoot` passed in `args` (originating from the session). Removed checks for `TASK_MASTER_PROJECT_ROOT` env var (we do not use this anymore) and package directory fallback. **Enhanced error handling to include detailed debug information (paths searched, CWD, server dir, etc.) and clearer potential solutions when `tasks.json` is not found.**
-  - **Retain CLI Fallbacks**: Kept `lastFoundProjectRoot` cache check and CWD search in `findTasksJsonPath` for compatibility with direct CLI usage.
-
-- Updated all MCP tools to use the new project root handling:
-  - Tools now call `getProjectRootFromSession` to determine the root.
-  - This root is passed explicitly as `projectRoot` in the `args` object to the corresponding `*Direct` function.
-  - Direct functions continue to use the (now simplified) `findTasksJsonPath` to locate `tasks.json` within the provided root.
-  - This ensures tools work reliably in integrated environments without requiring the user to specify `--project-root`.
-
-- Add comprehensive PROJECT_MARKERS array for detecting common project files (used in CLI fallback logic).
-- Improved error messages with specific troubleshooting guidance.
-- **Enhanced logging:**
-    - Indicate the source of project root selection more clearly.
-    - **Add verbose logging in `get-task.js` to trace session object content and resolved project root path, aiding debugging.**
-
-- DRY refactoring by centralizing path utilities in `core/utils/path-utils.js` and session handling in `tools/utils.js`.
-- Keep caching of `lastFoundProjectRoot` for CLI performance.
-
-- Split monolithic task-master-core.js into separate function files within direct-functions directory.
-- Implement update-task MCP command for updating a single task by ID.
-- Implement update-subtask MCP command for appending information to specific subtasks.
-- Implement generate MCP command for creating individual task files from tasks.json.
-- Implement set-status MCP command for updating task status.
-- Implement get-task MCP command for displaying detailed task information (renamed from show-task).
-- Implement next-task MCP command for finding the next task to work on.
-- Implement expand-task MCP command for breaking down tasks into subtasks.
-- Implement add-task MCP command for creating new tasks using AI assistance.
-- Implement add-subtask MCP command for adding subtasks to existing tasks.
-- Implement remove-subtask MCP command for removing subtasks from parent tasks.
-- Implement expand-all MCP command for expanding all tasks into subtasks.
-- Implement analyze-complexity MCP command for analyzing task complexity.
-- Implement clear-subtasks MCP command for clearing subtasks from parent tasks.
-- Implement remove-dependency MCP command for removing dependencies from tasks.
-- Implement validate-dependencies MCP command for checking validity of task dependencies.
-- Implement fix-dependencies MCP command for automatically fixing invalid dependencies.
-- Implement complexity-report MCP command for displaying task complexity analysis reports.
-- Implement add-dependency MCP command for creating dependency relationships between tasks.
-- Implement get-tasks MCP command for listing all tasks (renamed from list-tasks).
-- Implement `initialize_project` MCP tool to allow project setup via MCP client and radically improve and simplify onboarding by adding to mcp.json (e.g., Cursor).
-
-- Enhance documentation and tool descriptions:
-  - Create new `taskmaster.mdc` Cursor rule for comprehensive MCP tool and CLI command reference.
-  - Bundle taskmaster.mdc with npm package and include in project initialization.
-  - Add detailed descriptions for each tool's purpose, parameters, and common use cases.
-  - Include natural language patterns and keywords for better intent recognition.
-  - Document parameter descriptions with clear examples and default values.
-  - Add usage examples and context for each command/tool.
-  - **Update documentation (`mcp.mdc`, `utilities.mdc`, `architecture.mdc`, `new_features.mdc`, `commands.mdc`) to reflect the new session-based project root handling and the preferred MCP vs. CLI interaction model.**
-  - Improve clarity around project root auto-detection in tool documentation.
-  - Update tool descriptions to better reflect their actual behavior and capabilities.
-  - Add cross-references between related tools and commands.
-  - Include troubleshooting guidance in tool descriptions.
-  - **Add default values for `DEFAULT_SUBTASKS` and `DEFAULT_PRIORITY` to the example `.cursor/mcp.json` configuration.**
-
-- Document MCP server naming conventions in architecture.mdc and mcp.mdc files (file names use kebab-case, direct functions use camelCase with Direct suffix, tool registration functions use camelCase with Tool suffix, and MCP tool names use snake_case).
-- Update MCP tool naming to follow more intuitive conventions that better align with natural language requests in client chat applications.
-- Enhance task show view with a color-coded progress bar for visualizing subtask completion percentage.
-- Add "cancelled" status to UI module status configurations for marking tasks as cancelled without deletion.
-- Improve MCP server resource documentation with comprehensive implementation examples and best practices.
-- Enhance progress bars with status breakdown visualization showing proportional sections for different task statuses.
-- Add improved status tracking for both tasks and subtasks with detailed counts by status.
-- Optimize progress bar display with width constraints to prevent UI overflow on smaller terminals.
-- Improve status counts display with clear text labels beside status icons for better readability.
-- Treat deferred and cancelled tasks as effectively complete for progress calculation while maintaining visual distinction.
-- **Fix `reportProgress` calls** to use the correct `{ progress, total? }` format.
-- **Standardize logging in core task-manager functions (`expandTask`, `expandAllTasks`, `updateTasks`, `updateTaskById`, `updateSubtaskById`, `parsePRD`, `analyzeTaskComplexity`):**
-  - Implement a local `report` function in each to handle context-aware logging.
-  - Use `report` to choose between `mcpLog` (if available) and global `log` (from `utils.js`).
-  - Only call global `log` when `outputFormat` is 'text' and silent mode is off.
-  - Wrap CLI UI elements (tables, boxes, spinners) in `outputFormat === 'text'` checks.

.cursor/mcp.json

@@ -1,20 +1,18 @@
 {
-    "mcpServers": {
-        "taskmaster-ai": {
-            "command": "node",
-            "args": [
-                "./mcp-server/server.js"
-            ],
-            "env": {
-                "ANTHROPIC_API_KEY": "YOUR_ANTHROPIC_API_KEY_HERE",
-                "PERPLEXITY_API_KEY": "YOUR_PERPLEXITY_API_KEY_HERE",
-                "MODEL": "claude-3-7-sonnet-20250219",
-                "PERPLEXITY_MODEL": "sonar-pro",
-                "MAX_TOKENS": 128000,
-                "TEMPERATURE": 0.2,
-                "DEFAULT_SUBTASKS": 5,
-                "DEFAULT_PRIORITY": "medium"
-            }
-        }
-    }
+	"mcpServers": {
+		"taskmaster-ai": {
+			"command": "node",
+			"args": ["./mcp-server/server.js"],
+			"env": {
+				"ANTHROPIC_API_KEY": "YOUR_ANTHROPIC_API_KEY_HERE",
+				"PERPLEXITY_API_KEY": "YOUR_PERPLEXITY_API_KEY_HERE",
+				"MODEL": "claude-3-7-sonnet-20250219",
+				"PERPLEXITY_MODEL": "sonar-pro",
+				"MAX_TOKENS": 64000,
+				"TEMPERATURE": 0.2,
+				"DEFAULT_SUBTASKS": 5,
+				"DEFAULT_PRIORITY": "medium"
+			}
+		}
+	}
 }

.cursor/rules/architecture.mdc

@@ -14,13 +14,13 @@ alwaysApply: false
     - **Purpose**: Defines and registers all CLI commands using Commander.js.
     - **Responsibilities** (See also: [`commands.mdc`](mdc:.cursor/rules/commands.mdc)):
       - Parses command-line arguments and options.
-      - Invokes appropriate functions from other modules to execute commands.
+      - Invokes appropriate functions from other modules to execute commands (e.g., calls `initializeProject` from `init.js` for the `init` command).
       - Handles user input and output related to command execution.
       - Implements input validation and error handling for CLI commands.
     - **Key Components**:
       - `programInstance` (Commander.js `Command` instance): Manages command definitions.
       - `registerCommands(programInstance)`: Function to register all application commands.
-      - Command action handlers: Functions executed when a specific command is invoked.
+      - Command action handlers: Functions executed when a specific command is invoked, delegating to core modules.
 
   - **[`task-manager.js`](mdc:scripts/modules/task-manager.js): Task Data Management**
     - **Purpose**: Manages task data, including loading, saving, creating, updating, deleting, and querying tasks.
@@ -148,10 +148,23 @@ alwaysApply: false
         - Robust error handling for background tasks
       - **Usage**: Used for CPU-intensive operations like task expansion and PRD parsing
 
+  - **[`init.js`](mdc:scripts/init.js): Project Initialization Logic**
+    - **Purpose**: Contains the core logic for setting up a new Task Master project structure.
+    - **Responsibilities**:
+      - Creates necessary directories (`.cursor/rules`, `scripts`, `tasks`).
+      - Copies template files (`.env.example`, `.gitignore`, rule files, `dev.js`, etc.).
+      - Creates or merges `package.json` with required dependencies and scripts.
+      - Sets up MCP configuration (`.cursor/mcp.json`).
+      - Optionally initializes a git repository and installs dependencies.
+      - Handles user prompts for project details *if* called without skip flags (`-y`).
+    - **Key Function**:
+      - `initializeProject(options)`: The main function exported and called by the `init` command's action handler in [`commands.js`](mdc:scripts/modules/commands.js). It receives parsed options directly.
+    - **Note**: This script is used as a module and no longer handles its own argument parsing or direct execution via a separate `bin` file.
+
 - **Data Flow and Module Dependencies**:
 
-  - **Commands Initiate Actions**: User commands entered via the CLI (handled by [`commands.js`](mdc:scripts/modules/commands.js)) are the entry points for most operations.
-  - **Command Handlers Delegate to Managers**: Command handlers in [`commands.js`](mdc:scripts/modules/commands.js) call functions in [`task-manager.js`](mdc:scripts/modules/task-manager.js) and [`dependency-manager.js`](mdc:scripts/modules/dependency-manager.js) to perform core task and dependency management logic.
+  - **Commands Initiate Actions**: User commands entered via the CLI (parsed by `commander` based on definitions in [`commands.js`](mdc:scripts/modules/commands.js)) are the entry points for most operations.
+  - **Command Handlers Delegate to Core Logic**: Action handlers within [`commands.js`](mdc:scripts/modules/commands.js) call functions in core modules like [`task-manager.js`](mdc:scripts/modules/task-manager.js), [`dependency-manager.js`](mdc:scripts/modules/dependency-manager.js), and [`init.js`](mdc:scripts/init.js) (for the `init` command) to perform the actual work.
   - **UI for Presentation**:  [`ui.js`](mdc:scripts/modules/ui.js) is used by command handlers and task/dependency managers to display information to the user. UI functions primarily consume data and format it for output, without modifying core application state.
   - **Utilities for Common Tasks**: [`utils.js`](mdc:scripts/modules/utils.js) provides helper functions used by all other modules for configuration, logging, file operations, and common data manipulations.
   - **AI Services Integration**: AI functionalities (complexity analysis, task expansion, PRD parsing) are invoked from [`task-manager.js`](mdc:scripts/modules/task-manager.js) and potentially [`commands.js`](mdc:scripts/modules/commands.js), likely using functions that would reside in a dedicated `ai-services.js` module or be integrated within `utils.js` or `task-manager.js`.

.cursor/rules/commands.mdc

@@ -24,7 +24,7 @@ While this document details the implementation of Task Master's **CLI commands**
   programInstance
     .command('command-name')
     .description('Clear, concise description of what the command does')
-    .option('-s, --short-option <value>', 'Option description', 'default value')
+    .option('-o, --option <value>', 'Option description', 'default value')
     .option('--long-option <value>', 'Option description')
     .action(async (options) => {
       // Command implementation
@@ -34,7 +34,8 @@ While this document details the implementation of Task Master's **CLI commands**
 - **Command Handler Organization**:
   - ✅ DO: Keep action handlers concise and focused
   - ✅ DO: Extract core functionality to appropriate modules
-  - ✅ DO: Include validation for required parameters
+  - ✅ DO: Have the action handler import and call the relevant function(s) from core modules (e.g., `task-manager.js`, `init.js`), passing the parsed `options`.
+  - ✅ DO: Perform basic parameter validation (e.g., checking for required options) within the action handler or at the start of the called core function.
   - ❌ DON'T: Implement business logic in command handlers
 
 ## Best Practices for Removal/Delete Commands

.cursor/rules/taskmaster.mdc

@@ -37,7 +37,7 @@ This document provides a detailed reference for interacting with Taskmaster, cov
     *   `addAliases`: `Add shell aliases (tm, taskmaster) (default: false).` (CLI: `--aliases`)
     *   `yes`: `Skip prompts and use defaults/provided arguments (default: false).` (CLI: `-y, --yes`)
 *   **Usage:** Run this once at the beginning of a new project, typically via an integrated tool like Cursor. Operates on the current working directory of the MCP server. 
-
+*   **Important:** Once complete, you *MUST* parse a prd in order to generate tasks. There will be no tasks files until then. The next step after initializing should be to create a PRD using the example PRD in scripts/example_prd.txt. 
 
 ### 2. Parse PRD (`parse_prd`)
 
@@ -51,7 +51,7 @@ This document provides a detailed reference for interacting with Taskmaster, cov
     *   `force`: `Use this to allow Taskmaster to overwrite an existing 'tasks.json' without asking for confirmation.` (CLI: `-f, --force`)
 *   **Usage:** Useful for bootstrapping a project from an existing requirements document.
 *   **Notes:** Task Master will strictly adhere to any specific requirements mentioned in the PRD (libraries, database schemas, frameworks, tech stacks, etc.) while filling in any gaps where the PRD isn't fully specified. Tasks are designed to provide the most direct implementation path while avoiding over-engineering.
-*   **Important:** This MCP tool makes AI calls and can take up to a minute to complete. Please inform users to hang tight while the operation is in progress.
+*   **Important:** This MCP tool makes AI calls and can take up to a minute to complete. Please inform users to hang tight while the operation is in progress. If the user does not have a PRD, suggest discussing their idea and then use the example PRD in scripts/example_prd.txt as a template for creating the PRD based on their idea, for use with parse-prd.
 
 ---
 

.cursor/rules/tests.mdc

@@ -5,6 +5,8 @@ globs: "**/*.test.js,tests/**/*"
 
 # Testing Guidelines for Task Master CLI
 
+*Note:* Never use asynchronous operations in tests. Always mock tests properly based on the way the tested functions are defined and used. Do not arbitrarily create tests. Based them on the low-level details and execution of the underlying code being tested. 
+
 ## Test Organization Structure
 
 - **Unit Tests** (See [`architecture.mdc`](mdc:.cursor/rules/architecture.mdc) for module breakdown)
@@ -88,6 +90,122 @@ describe('Feature or Function Name', () => {
 });
 ```
 
+## Commander.js Command Testing Best Practices
+
+When testing CLI commands built with Commander.js, several special considerations must be made to avoid common pitfalls:
+
+- **Direct Action Handler Testing**
+  - ✅ **DO**: Test the command action handlers directly rather than trying to mock the entire Commander.js chain
+  - ✅ **DO**: Create simplified test-specific implementations of command handlers that match the original behavior
+  - ✅ **DO**: Explicitly handle all options, including defaults and shorthand flags (e.g., `-p` for `--prompt`)
+  - ✅ **DO**: Include null/undefined checks in test implementations for parameters that might be optional
+  - ✅ **DO**: Use fixtures from `tests/fixtures/` for consistent sample data across tests
+  
+  ```javascript
+  // ✅ DO: Create a simplified test version of the command handler
+  const testAddTaskAction = async (options) => {
+    options = options || {}; // Ensure options aren't undefined
+    
+    // Validate parameters
+    const isManualCreation = options.title && options.description;
+    const prompt = options.prompt || options.p; // Handle shorthand flags
+    
+    if (!prompt && !isManualCreation) {
+      throw new Error('Expected error message');
+    }
+    
+    // Call the mocked task manager
+    return mockTaskManager.addTask(/* parameters */);
+  };
+  
+  test('should handle required parameters correctly', async () => {
+    // Call the test implementation directly
+    await expect(async () => {
+      await testAddTaskAction({ file: 'tasks.json' });
+    }).rejects.toThrow('Expected error message');
+  });
+  ```
+
+- **Commander Chain Mocking (If Necessary)**
+  - ✅ **DO**: Mock ALL chainable methods (`option`, `argument`, `action`, `on`, etc.)
+  - ✅ **DO**: Return `this` (or the mock object) from all chainable method mocks
+  - ✅ **DO**: Remember to mock not only the initial object but also all objects returned by methods
+  - ✅ **DO**: Implement a mechanism to capture the action handler for direct testing
+  
+  ```javascript
+  // If you must mock the Commander.js chain:
+  const mockCommand = {
+    command: jest.fn().mockReturnThis(),
+    description: jest.fn().mockReturnThis(),
+    option: jest.fn().mockReturnThis(),
+    argument: jest.fn().mockReturnThis(), // Don't forget this one
+    action: jest.fn(fn => { 
+      actionHandler = fn; // Capture the handler for testing
+      return mockCommand; 
+    }),
+    on: jest.fn().mockReturnThis() // Don't forget this one
+  };
+  ```
+
+- **Parameter Handling**
+  - ✅ **DO**: Check for both main flag and shorthand flags (e.g., `prompt` and `p`)
+  - ✅ **DO**: Handle parameters like Commander would (comma-separated lists, etc.)
+  - ✅ **DO**: Set proper default values as defined in the command
+  - ✅ **DO**: Validate that required parameters are actually required in tests
+  
+  ```javascript
+  // Parse dependencies like Commander would
+  const dependencies = options.dependencies 
+    ? options.dependencies.split(',').map(id => id.trim())
+    : [];
+  ```
+
+- **Environment and Session Handling**
+  - ✅ **DO**: Properly mock session objects when required by functions
+  - ✅ **DO**: Reset environment variables between tests if modified
+  - ✅ **DO**: Use a consistent pattern for environment-dependent tests
+  
+  ```javascript
+  // Session parameter mock pattern
+  const sessionMock = { session: process.env };
+  
+  // In test:
+  expect(mockAddTask).toHaveBeenCalledWith(
+    expect.any(String),
+    'Test prompt',
+    [],
+    'medium',
+    sessionMock,
+    false,
+    null,
+    null
+  );
+  ```
+
+- **Common Pitfalls to Avoid**
+  - ❌ **DON'T**: Try to use the real action implementation without proper mocking
+  - ❌ **DON'T**: Mock Commander partially - either mock it completely or test the action directly
+  - ❌ **DON'T**: Forget to handle optional parameters that may be undefined
+  - ❌ **DON'T**: Neglect to test shorthand flag functionality (e.g., `-p`, `-r`)
+  - ❌ **DON'T**: Create circular dependencies in your test mocks
+  - ❌ **DON'T**: Access variables before initialization in your test implementations
+  - ❌ **DON'T**: Include actual command execution in unit tests
+  - ❌ **DON'T**: Overwrite the same file path in multiple tests
+  
+  ```javascript
+  // ❌ DON'T: Create circular references in mocks
+  const badMock = {
+    method: jest.fn().mockImplementation(() => badMock.method())
+  };
+  
+  // ❌ DON'T: Access uninitialized variables
+  const badImplementation = () => {
+    const result = uninitialized;
+    let uninitialized = 'value';
+    return result;
+  };
+  ```
+
 ## Jest Module Mocking Best Practices
 
 - **Mock Hoisting Behavior**
@@ -552,6 +670,102 @@ npm test -- -t "pattern to match"
   });
   ```
 
+## Testing AI Service Integrations
+
+- **DO NOT import real AI service clients**
+  - ❌ DON'T: Import actual AI clients from their libraries
+  - ✅ DO: Create fully mocked versions that return predictable responses
+
+  ```javascript
+  // ❌ DON'T: Import and instantiate real AI clients
+  import { Anthropic } from '@anthropic-ai/sdk';
+  const anthropic = new Anthropic({ apiKey: process.env.ANTHROPIC_API_KEY });
+
+  // ✅ DO: Mock the entire module with controlled behavior
+  jest.mock('@anthropic-ai/sdk', () => ({
+    Anthropic: jest.fn().mockImplementation(() => ({
+      messages: {
+        create: jest.fn().mockResolvedValue({
+          content: [{ type: 'text', text: 'Mocked AI response' }]
+        })
+      }
+    }))
+  }));
+  ```
+
+- **DO NOT rely on environment variables for API keys**
+  - ❌ DON'T: Assume environment variables are set in tests
+  - ✅ DO: Set mock environment variables in test setup
+
+  ```javascript
+  // In tests/setup.js or at the top of test file
+  process.env.ANTHROPIC_API_KEY = 'test-mock-api-key-for-tests';
+  process.env.PERPLEXITY_API_KEY = 'test-mock-perplexity-key-for-tests';
+  ```
+
+- **DO NOT use real AI client initialization logic**
+  - ❌ DON'T: Use code that attempts to initialize or validate real AI clients
+  - ✅ DO: Create test-specific paths that bypass client initialization
+
+  ```javascript
+  // ❌ DON'T: Test functions that require valid AI client initialization
+  // This will fail without proper API keys or network access
+  test('should use AI client', async () => {
+    const result = await functionThatInitializesAIClient();
+    expect(result).toBeDefined();
+  });
+
+  // ✅ DO: Test with bypassed initialization or manual task paths
+  test('should handle manual task creation without AI', () => {
+    // Using a path that doesn't require AI client initialization
+    const result = addTaskDirect({ 
+      title: 'Manual Task', 
+      description: 'Test Description'
+    }, mockLogger);
+    
+    expect(result.success).toBe(true);
+  });
+  ```
+
+## Testing Asynchronous Code
+
+- **DO NOT rely on asynchronous operations in tests**
+  - ❌ DON'T: Use real async/await or Promise resolution in tests
+  - ✅ DO: Make all mocks return synchronous values when possible
+
+  ```javascript
+  // ❌ DON'T: Use real async functions that might fail unpredictably
+  test('should handle async operation', async () => {
+    const result = await realAsyncFunction(); // Can time out or fail for external reasons
+    expect(result).toBe(expectedValue);
+  });
+
+  // ✅ DO: Make async operations synchronous in tests
+  test('should handle operation', () => {
+    mockAsyncFunction.mockReturnValue({ success: true, data: 'test' });
+    const result = functionUnderTest();
+    expect(result).toEqual({ success: true, data: 'test' });
+  });
+  ```
+
+- **DO NOT test exact error messages**
+  - ❌ DON'T: Assert on exact error message text that might change
+  - ✅ DO: Test for error presence and general properties
+
+  ```javascript
+  // ❌ DON'T: Test for exact error message text
+  expect(result.error).toBe('Could not connect to API: Network error');
+
+  // ✅ DO: Test for general error properties or message patterns
+  expect(result.success).toBe(false);
+  expect(result.error).toContain('Could not connect');
+  // Or even better:
+  expect(result).toMatchObject({ 
+    success: false,
+    error: expect.stringContaining('connect')
+  });
+  ```
+
 ## Reliable Testing Techniques
 
 - **Create Simplified Test Functions**
@@ -564,99 +778,125 @@ npm test -- -t "pattern to match"
   const setTaskStatus = async (taskId, newStatus) => {
     const tasksPath = 'tasks/tasks.json';
     const data = await readJSON(tasksPath);
-    // Update task status logic
+    // [implementation]
     await writeJSON(tasksPath, data);
-    return data;
+    return { success: true };
   };
   
-  // Test-friendly simplified function (easy to test)
-  const testSetTaskStatus = (tasksData, taskIdInput, newStatus) => {
-    // Same core logic without file operations
-    // Update task status logic on provided tasksData object
-    return tasksData; // Return updated data for assertions
+  // Test-friendly version (easier to test)
+  const updateTaskStatus = (tasks, taskId, newStatus) => {
+    // Pure logic without side effects
+    const updatedTasks = [...tasks];
+    const taskIndex = findTaskById(updatedTasks, taskId);
+    if (taskIndex === -1) return { success: false, error: 'Task not found' };
+    updatedTasks[taskIndex].status = newStatus;
+    return { success: true, tasks: updatedTasks };
   };
   ```
 
-- **Avoid Real File System Operations**
-  - Never write to real files during tests
-  - Create test-specific versions of file operation functions
-  - Mock all file system operations including read, write, exists, etc.
-  - Verify function behavior using the in-memory data structures
-  
-  ```javascript
-  // Mock file operations
-  const mockReadJSON = jest.fn();
-  const mockWriteJSON = jest.fn();
-  
-  jest.mock('../../scripts/modules/utils.js', () => ({
-    readJSON: mockReadJSON,
-    writeJSON: mockWriteJSON,
-  }));
-  
-  test('should update task status correctly', () => {
-    // Setup mock data
-    const testData = JSON.parse(JSON.stringify(sampleTasks));
-    mockReadJSON.mockReturnValue(testData);
-    
-    // Call the function that would normally modify files
-    const result = testSetTaskStatus(testData, '1', 'done');
-    
-    // Assert on the in-memory data structure
-    expect(result.tasks[0].status).toBe('done');
-  });
-  ```
-
-- **Data Isolation Between Tests**
-  - Always create fresh copies of test data for each test
-  - Use `JSON.parse(JSON.stringify(original))` for deep cloning
-  - Reset all mocks before each test with `jest.clearAllMocks()`
-  - Avoid state that persists between tests
-  
-  ```javascript
-  beforeEach(() => {
-    jest.clearAllMocks();
-    // Deep clone the test data
-    testTasksData = JSON.parse(JSON.stringify(sampleTasks));
-  });
-  ```
-
-- **Test All Path Variations**
-  - Regular tasks and subtasks
-  - Single items and multiple items
-  - Success paths and error paths
-  - Edge cases (empty data, invalid inputs, etc.)
-  
-  ```javascript
-  // Multiple test cases covering different scenarios
-  test('should update regular task status', () => {
-    /* test implementation */
-  });
-  
-  test('should update subtask status', () => {
-    /* test implementation */
-  });
-  
-  test('should update multiple tasks when given comma-separated IDs', () => {
-    /* test implementation */
-  });
-  
-  test('should throw error for non-existent task ID', () => {
-    /* test implementation */
-  });
-  ```
-
-- **Stabilize Tests With Predictable Input/Output**
-  - Use consistent, predictable test fixtures
-  - Avoid random values or time-dependent data
-  - Make tests deterministic for reliable CI/CD
-  - Control all variables that might affect test outcomes
-  
-  ```javascript
-  // Use a specific known date instead of current date
-  const fixedDate = new Date('2023-01-01T12:00:00Z');
-  jest.spyOn(global, 'Date').mockImplementation(() => fixedDate);
-  ```
-
 See [tests/README.md](mdc:tests/README.md) for more details on the testing approach.
 
 Refer to [jest.config.js](mdc:jest.config.js) for Jest configuration options.
+
+## Variable Hoisting and Module Initialization Issues
+
+When testing ES modules or working with complex module imports, you may encounter variable hoisting and initialization issues. These can be particularly tricky to debug and often appear as "Cannot access 'X' before initialization" errors.
+
+- **Understanding Module Initialization Order**
+  - ✅ **DO**: Declare and initialize global variables at the top of modules
+  - ✅ **DO**: Use proper function declarations to avoid hoisting issues
+  - ✅ **DO**: Initialize variables before they are referenced, especially in imported modules
+  - ✅ **DO**: Be aware that imports are hoisted to the top of the file
+  
+  ```javascript
+  // ✅ DO: Define global state variables at the top of the module
+  let silentMode = false; // Declare and initialize first
+  
+  const CONFIG = { /* configuration */ };
+  
+  function isSilentMode() {
+    return silentMode; // Reference variable after it's initialized
+  }
+  
+  function log(level, message) {
+    if (isSilentMode()) return; // Use the function instead of accessing variable directly
+    // ...
+  }
+  ```
+
+- **Testing Modules with Initialization-Dependent Functions**
+  - ✅ **DO**: Create test-specific implementations that initialize all variables correctly
+  - ✅ **DO**: Use factory functions in mocks to ensure proper initialization order
+  - ✅ **DO**: Be careful with how you mock or stub functions that depend on module state
+  
+  ```javascript
+  // ✅ DO: Test-specific implementation that avoids initialization issues
+  const testLog = (level, ...args) => {
+    // Local implementation with proper initialization
+    const isSilent = false; // Explicit initialization
+    if (isSilent) return;
+    // Test implementation...
+  };
+  ```
+
+- **Common Hoisting-Related Errors to Avoid**
+  - ❌ **DON'T**: Reference variables before their declaration in module scope
+  - ❌ **DON'T**: Create circular dependencies between modules
+  - ❌ **DON'T**: Rely on variable initialization order across module boundaries
+  - ❌ **DON'T**: Define functions that use hoisted variables before they're initialized
+  
+  ```javascript
+  // ❌ DON'T: Create reference-before-initialization patterns
+  function badFunction() {
+    if (silentMode) { /* ... */ } // ReferenceError if silentMode is declared later
+  }
+  
+  let silentMode = false;
+  
+  // ❌ DON'T: Create cross-module references that depend on initialization order
+  // module-a.js
+  import { getSetting } from './module-b.js';
+  export const config = { value: getSetting() };
+  
+  // module-b.js
+  import { config } from './module-a.js';
+  export function getSetting() {
+    return config.value; // Circular dependency causing initialization issues
+  }
+  ```
+
+- **Dynamic Imports as a Solution**
+  - ✅ **DO**: Use dynamic imports (`import()`) to avoid initialization order issues
+  - ✅ **DO**: Structure modules to avoid circular dependencies that cause initialization issues
+  - ✅ **DO**: Consider factory functions for modules with complex state
+  
+  ```javascript
+  // ✅ DO: Use dynamic imports to avoid initialization issues
+  async function getTaskManager() {
+    return import('./task-manager.js');
+  }
+  
+  async function someFunction() {
+    const taskManager = await getTaskManager();
+    return taskManager.someMethod();
+  }
+  ```
+
+- **Testing Approach for Modules with Initialization Issues**
+  - ✅ **DO**: Create self-contained test implementations rather than using real implementations
+  - ✅ **DO**: Mock dependencies at module boundaries instead of trying to mock deep dependencies
+  - ✅ **DO**: Isolate module-specific state in tests
+  
+  ```javascript
+  // ✅ DO: Create isolated test implementation instead of reusing module code
+  test('should log messages when not in silent mode', () => {
+    // Local test implementation instead of importing from module
+    const testLog = (level, message) => {
+      if (false) return; // Always non-silent for this test
+      mockConsole(level, message);
+    };
+    
+    testLog('info', 'test message');
+    expect(mockConsole).toHaveBeenCalledWith('info', 'test message');
+  });
+  ``` 

.env.example

@@ -5,7 +5,7 @@ PERPLEXITY_API_KEY=your_perplexity_api_key_here     # Format: pplx-...
 # Model Configuration
 MODEL=claude-3-7-sonnet-20250219                    # Recommended models: claude-3-7-sonnet-20250219, claude-3-opus-20240229
 PERPLEXITY_MODEL=sonar-pro                          # Perplexity model for research-backed subtasks
-MAX_TOKENS=128000                                   # Maximum tokens for model responses
+MAX_TOKENS=64000                                    # Maximum tokens for model responses
 TEMPERATURE=0.2                                     # Temperature for model responses (0.0-1.0)
 
 # Logging Configuration

.github/ISSUE_TEMPLATE/bug_report.md

@@ -0,0 +1,39 @@
+---
+name: Bug report
+about: Create a report to help us improve
+title: 'bug: '
+labels: bug
+assignees: ''
+---
+
+### Description
+
+Detailed description of the problem, including steps to reproduce the issue.
+
+### Steps to Reproduce
+
+1. Step-by-step instructions to reproduce the issue
+2. Include command examples or UI interactions
+
+### Expected Behavior
+
+Describe clearly what the expected outcome or behavior should be.
+
+### Actual Behavior
+
+Describe clearly what the actual outcome or behavior is.
+
+### Screenshots or Logs
+
+Provide screenshots, logs, or error messages if applicable.
+
+### Environment
+
+- Task Master version:
+- Node.js version:
+- Operating system:
+- IDE (if applicable):
+
+### Additional Context
+
+Any additional information or context that might help diagnose the issue.

.github/ISSUE_TEMPLATE/enhancements---feature-requests.md

@@ -0,0 +1,51 @@
+---
+name: Enhancements & feature requests
+about: Suggest an idea for this project
+title: 'feat: '
+labels: enhancement
+assignees: ''
+---
+
+> "Direct quote or clear summary of user request or need or user story."
+
+### Motivation
+
+Detailed explanation of why this feature is important. Describe the problem it solves or the benefit it provides.
+
+### Proposed Solution
+
+Clearly describe the proposed feature, including:
+
+- High-level overview of the feature
+- Relevant technologies or integrations
+- How it fits into the existing workflow or architecture
+
+### High-Level Workflow
+
+1. Step-by-step description of how the feature will be implemented
+2. Include necessary intermediate milestones
+
+### Key Elements
+
+- Bullet-point list of technical or UX/UI enhancements
+- Mention specific integrations or APIs
+- Highlight changes needed in existing data models or commands
+
+### Example Workflow
+
+Provide a clear, concrete example demonstrating the feature:
+
+```shell
+$ task-master [action]
+→ Expected response/output
+```
+
+### Implementation Considerations
+
+- Dependencies on external components or APIs
+- Backward compatibility requirements
+- Potential performance impacts or resource usage
+
+### Out of Scope (Future Considerations)
+
+Clearly list any features or improvements not included but relevant for future iterations.

.github/ISSUE_TEMPLATE/feedback.md

@@ -0,0 +1,31 @@
+---
+name: Feedback
+about: Give us specific feedback on the product/approach/tech
+title: 'feedback: '
+labels: feedback
+assignees: ''
+---
+
+### Feedback Summary
+
+Provide a clear summary or direct quote from user feedback.
+
+### User Context
+
+Explain the user's context or scenario in which this feedback was provided.
+
+### User Impact
+
+Describe how this feedback affects the user experience or workflow.
+
+### Suggestions
+
+Provide any initial thoughts, potential solutions, or improvements based on the feedback.
+
+### Relevant Screenshots or Examples
+
+Attach screenshots, logs, or examples that illustrate the feedback.
+
+### Additional Notes
+
+Any additional context or related information.

.github/workflows/ci.yml

@@ -14,7 +14,7 @@ permissions:
   contents: read
 
 jobs:
-  build:
+  setup:
     runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@v4
@@ -24,21 +24,55 @@ jobs:
       - uses: actions/setup-node@v4
         with:
           node-version: 20
-          cache: "npm"
+          cache: 'npm'
+
+      - name: Install Dependencies
+        id: install
+        run: npm ci
+        timeout-minutes: 2
 
       - name: Cache node_modules
         uses: actions/cache@v4
         with:
-          path: |
-            node_modules
-            */*/node_modules
-          key: ${{ runner.os }}-node-${{ hashFiles('**/package-lock.json') }}
-          restore-keys: |
-            ${{ runner.os }}-node-
+          path: node_modules
+          key: ${{ runner.os }}-node-modules-${{ hashFiles('**/package-lock.json') }}
 
-      - name: Install Dependencies
-        run: npm ci
-        timeout-minutes: 2
+  format-check:
+    needs: setup
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+
+      - uses: actions/setup-node@v4
+        with:
+          node-version: 20
+
+      - name: Restore node_modules
+        uses: actions/cache@v4
+        with:
+          path: node_modules
+          key: ${{ runner.os }}-node-modules-${{ hashFiles('**/package-lock.json') }}
+
+      - name: Format Check
+        run: npm run format-check
+        env:
+          FORCE_COLOR: 1
+
+  test:
+    needs: setup
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+
+      - uses: actions/setup-node@v4
+        with:
+          node-version: 20
+
+      - name: Restore node_modules
+        uses: actions/cache@v4
+        with:
+          path: node_modules
+          key: ${{ runner.os }}-node-modules-${{ hashFiles('**/package-lock.json') }}
 
       - name: Run Tests
         run: |
@@ -47,13 +81,13 @@ jobs:
           NODE_ENV: test
           CI: true
           FORCE_COLOR: 1
-        timeout-minutes: 15
+        timeout-minutes: 10
 
       - name: Upload Test Results
         if: always()
         uses: actions/upload-artifact@v4
         with:
-          name: test-results-node
+          name: test-results
           path: |
             test-results
             coverage

.github/workflows/release.yml

@@ -14,7 +14,7 @@ jobs:
       - uses: actions/setup-node@v4
         with:
           node-version: 20
-          cache: "npm"
+          cache: 'npm'
 
       - name: Cache node_modules
         uses: actions/cache@v4

.prettierignore

@@ -0,0 +1,7 @@
+# Ignore artifacts:
+build
+coverage
+.changeset
+tasks
+package-lock.json
+tests/fixture/*.json

.prettierrc

@@ -0,0 +1,11 @@
+{
+	"printWidth": 80,
+	"tabWidth": 2,
+	"useTabs": true,
+	"semi": true,
+	"singleQuote": true,
+	"trailingComma": "none",
+	"bracketSpacing": true,
+	"arrowParens": "always",
+	"endOfLine": "lf"
+}

.vscode/extensions.json

@@ -0,0 +1,3 @@
+{
+	"recommendations": ["esbenp.prettier-vscode"]
+}

CHANGELOG.md

@@ -1,5 +1,68 @@
 # task-master-ai
 
+## 0.11.0
+
+### Minor Changes
+
+- [#71](https://github.com/eyaltoledano/claude-task-master/pull/71) [`7141062`](https://github.com/eyaltoledano/claude-task-master/commit/71410629ba187776d92a31ea0729b2ff341b5e38) Thanks [@eyaltoledano](https://github.com/eyaltoledano)! - - **Easier Ways to Use Taskmaster (CLI & MCP):**
+  - You can now use Taskmaster either by installing it as a standard command-line tool (`task-master`) or as an MCP server directly within integrated development tools like Cursor (using its built-in features). **This makes Taskmaster accessible regardless of your preferred workflow.**
+  - Setting up a new project is simpler in integrated tools, thanks to the new `initialize_project` capability.
+  - **Complete MCP Implementation:**
+    - NOTE: Many MCP clients charge on a per tool basis. In that regard, the most cost-efficient way to use Taskmaster is through the CLI directly. Otherwise, the MCP offers the smoothest and most recommended user experience.
+    - All MCP tools now follow a standardized output format that mimicks RESTful API responses. They are lean JSON responses that are context-efficient. This is a net improvement over the last version which sent the whole CLI output directly, which needlessly wasted tokens.
+    - Added a `remove-task` command to permanently delete tasks you no longer need.
+    - Many new MCP tools are available for managing tasks (updating details, adding/removing subtasks, generating task files, setting status, finding the next task, breaking down complex tasks, handling dependencies, analyzing complexity, etc.), usable both from the command line and integrated tools. **(See the `taskmaster.mdc` reference guide and improved readme for a full list).**
+  - **Better Task Tracking:**
+    - Added a "cancelled" status option for tasks, providing more ways to categorize work.
+  - **Smoother Experience in Integrated Tools:**
+    - Long-running operations (like breaking down tasks or analysis) now run in the background **via an Async Operation Manager** with progress updates, so you know what's happening without waiting and can check status later.
+  - **Improved Documentation:**
+    - Added a comprehensive reference guide (`taskmaster.mdc`) detailing all commands and tools with examples, usage tips, and troubleshooting info. This is mostly for use by the AI but can be useful for human users as well.
+    - Updated the main README with clearer instructions and added a new tutorial/examples guide.
+    - Added documentation listing supported integrated tools (like Cursor).
+  - **Increased Stability & Reliability:**
+    - Using Taskmaster within integrated tools (like Cursor) is now **more stable and the recommended approach.**
+    - Added automated testing (CI) to catch issues earlier, leading to a more reliable tool.
+    - Fixed release process issues to ensure users get the correct package versions when installing or updating via npm.
+  - **Better Command-Line Experience:**
+    - Fixed bugs in the `expand-all` command that could cause **NaN errors or JSON formatting issues (especially when using `--research`).**
+    - Fixed issues with parameter validation in the `analyze-complexity` command (specifically related to the `threshold` parameter).
+    - Made the `add-task` command more consistent by adding standard flags like `--title`, `--description` for manual task creation so you don't have to use `--prompt` and can quickly drop new ideas and stay in your flow.
+    - Improved error messages for incorrect commands or flags, making them easier to understand.
+    - Added confirmation warnings before permanently deleting tasks (`remove-task`) to prevent mistakes. There's a known bug for deleting multiple tasks with comma-separated values. It'll be fixed next release.
+    - Renamed some background tool names used by integrated tools (e.g., `list-tasks` is now `get_tasks`) to be more intuitive if seen in logs or AI interactions.
+    - Smoother project start: **Improved the guidance provided to AI assistants immediately after setup** (related to `init` and `parse-prd` steps). This ensures the AI doesn't go on a tangent deciding its own workflow, and follows the exact process outlined in the Taskmaster workflow.
+  - **Clearer Error Messages:**
+    - When generating subtasks fails, error messages are now clearer, **including specific task IDs and potential suggestions.**
+    - AI fallback from Claude to Perplexity now also works the other way around. If Perplexity is down, will switch to Claude.
+  - **Simplified Setup & Configuration:**
+    - Made it clearer how to configure API keys depending on whether you're using the command-line tool (`.env` file) or an integrated tool (`.cursor/mcp.json` file).
+    - Taskmaster is now better at automatically finding your project files, especially in integrated tools, reducing the need for manual path settings.
+    - Fixed an issue that could prevent Taskmaster from working correctly immediately after initialization in integrated tools (related to how the MCP server was invoked). This should solve the issue most users were experiencing with the last release (0.10.x)
+    - Updated setup templates with clearer examples for API keys.
+    - \*\*For advanced users setting up the MCP server manually, the command is now `npx -y task-master-ai task-master-mcp`.
+  - **Enhanced Performance & AI:**
+    - Updated underlying AI model settings:
+      - **Increased Context Window:** Can now handle larger projects/tasks due to an increased Claude context window (64k -> 128k tokens).
+      - **Reduced AI randomness:** More consistent and predictable AI outputs (temperature 0.4 -> 0.2).
+      - **Updated default AI models:** Uses newer models like `claude-3-7-sonnet-20250219` and Perplexity `sonar-pro` by default.
+      - **More granular breakdown:** Increased the default number of subtasks generated by `expand` to 5 (from 4).
+      - **Consistent defaults:** Set the default priority for new tasks consistently to "medium".
+    - Improved performance when viewing task details in integrated tools by sending less redundant data.
+  - **Documentation Clarity:**
+    - Clarified in documentation that Markdown files (`.md`) can be used for Product Requirements Documents (`parse_prd`).
+    - Improved the description for the `numTasks` option in `parse_prd` for better guidance.
+  - **Improved Visuals (CLI):**
+    - Enhanced the look and feel of progress bars and status updates in the command line.
+    - Added a helpful color-coded progress bar to the task details view (`show` command) to visualize subtask completion.
+    - Made progress bars show a breakdown of task statuses (e.g., how many are pending vs. done).
+    - Made status counts clearer with text labels next to icons.
+    - Prevented progress bars from messing up the display on smaller terminal windows.
+    - Adjusted how progress is calculated for 'deferred' and 'cancelled' tasks in the progress bar, while still showing their distinct status visually.
+  - **Fixes for Integrated Tools:**
+    - Fixed how progress updates are sent to integrated tools, ensuring they display correctly.
+    - Fixed internal issues that could cause errors or invalid JSON responses when using Taskmaster with integrated tools.
+
 ## 0.10.1
 
 ### Patch Changes

LICENSE.md

@@ -1,90 +0,0 @@
-# Dual License
-
-This project is licensed under two separate licenses:
-
-1. [Business Source License 1.1](#business-source-license-11) (BSL 1.1) for commercial use of Task Master itself
-2. [Apache License 2.0](#apache-license-20) for all other uses
-
-## Business Source License 1.1
-
-Terms: https://mariadb.com/bsl11/
-
-Licensed Work: Task Master AI
-Additional Use Grant: You may use Task Master AI to create and commercialize your own projects and products.
-
-Change Date: 2025-03-30
-Change License: None
-
-The Licensed Work is subject to the Business Source License 1.1. If you are interested in using the Licensed Work in a way that competes directly with Task Master, please contact the licensors.
-
-### Licensor
-
-- Eyal Toledano (GitHub: @eyaltoledano)
-- Ralph (GitHub: @Crunchyman-ralph)
-
-### Commercial Use Restrictions
-
-This license explicitly restricts certain commercial uses of Task Master AI to the Licensors listed above. Restricted commercial uses include:
-
-1. Creating commercial products or services that directly compete with Task Master AI
-2. Selling Task Master AI itself as a service
-3. Offering Task Master AI's functionality as a commercial managed service
-4. Reselling or redistributing Task Master AI for a fee
-
-### Explicitly Permitted Uses
-
-The following uses are explicitly allowed under this license:
-
-1. Using Task Master AI to create and commercialize your own projects
-2. Using Task Master AI in commercial environments for internal development
-3. Building and selling products or services that were created using Task Master AI
-4. Using Task Master AI for commercial development as long as you're not selling Task Master AI itself
-
-### Additional Terms
-
-1. The right to commercialize Task Master AI itself is exclusively reserved for the Licensors
-2. No party may create commercial products that directly compete with Task Master AI without explicit written permission
-3. Forks of this repository are subject to the same restrictions regarding direct competition
-4. Contributors agree that their contributions will be subject to this same dual licensing structure
-
-## Apache License 2.0
-
-For all uses other than those restricted above. See [APACHE-LICENSE](./APACHE-LICENSE) for the full license text.
-
-### Permitted Use Definition
-
-You may use Task Master AI for any purpose, including commercial purposes, as long as you are not:
-
-1. Creating a direct competitor to Task Master AI
-2. Selling Task Master AI itself as a service
-3. Redistributing Task Master AI for a fee
-
-### Requirements for Use
-
-1. You must include appropriate copyright notices
-2. You must state significant changes made to the software
-3. You must preserve all license notices
-
-## Questions and Commercial Licensing
-
-For questions about licensing or to inquire about commercial use that may compete with Task Master, please contact:
-
-- Eyal Toledano (GitHub: @eyaltoledano)
-- Ralph (GitHub: @Crunchyman-ralph)
-
-## Examples
-
-### ✅ Allowed Uses
-
-- Using Task Master to create a commercial SaaS product
-- Using Task Master in your company for development
-- Creating and selling products that were built using Task Master
-- Using Task Master to generate code for commercial projects
-- Offering consulting services where you use Task Master
-
-### ❌ Restricted Uses
-
-- Creating a competing AI task management tool
-- Selling access to Task Master as a service
-- Creating a hosted version of Task Master
-- Reselling Task Master's functionality

README-task-master.md

@@ -58,6 +58,7 @@ This will prompt you for project details and set up a new project with the neces
 ### Important Notes
 
 1. **ES Modules Configuration:**
+
    - This project uses ES Modules (ESM) instead of CommonJS.
    - This is set via `"type": "module"` in your package.json.
    - Use `import/export` syntax instead of `require()`.
@@ -145,7 +146,7 @@ To enable enhanced task management capabilities directly within Cursor using the
 4. Configure with the following details:
    - Name: "Task Master"
    - Type: "Command"
-   - Command: "npx -y --package task-master-ai task-master-mcp"
+   - Command: "npx -y task-master-mcp"
 5. Save the settings
 
 Once configured, you can interact with Task Master's task management commands directly through Cursor's interface, providing a more integrated experience.

README.md

@@ -1,62 +1,68 @@
-# Task Master
+# Task Master [![GitHub stars](https://img.shields.io/github/stars/eyaltoledano/claude-task-master?style=social)](https://github.com/eyaltoledano/claude-task-master/stargazers)
 
-[![CI](https://github.com/eyaltoledano/claude-task-master/actions/workflows/ci.yml/badge.svg)](https://github.com/eyaltoledano/claude-task-master/actions/workflows/ci.yml)
-[![License: MIT with Commons Clause](https://img.shields.io/badge/license-MIT%20with%20Commons%20Clause-blue.svg)](LICENSE)
-[![npm version](https://badge.fury.io/js/task-master-ai.svg)](https://badge.fury.io/js/task-master-ai)
+[![CI](https://github.com/eyaltoledano/claude-task-master/actions/workflows/ci.yml/badge.svg)](https://github.com/eyaltoledano/claude-task-master/actions/workflows/ci.yml) [![npm version](https://badge.fury.io/js/task-master-ai.svg)](https://badge.fury.io/js/task-master-ai) ![Discord Follow](https://dcbadge.limes.pink/api/server/https://discord.gg/2ms58QJjqp?style=flat) [![License: MIT with Commons Clause](https://img.shields.io/badge/license-MIT%20with%20Commons%20Clause-blue.svg)](LICENSE)
 
-### by [@eyaltoledano](https://x.com/eyaltoledano)
+### By [@eyaltoledano](https://x.com/eyaltoledano) & [@RalphEcom](https://x.com/RalphEcom)
+
+[![Twitter Follow](https://img.shields.io/twitter/follow/eyaltoledano?style=flat)](https://x.com/eyaltoledano)
+[![Twitter Follow](https://img.shields.io/twitter/follow/RalphEcom?style=flat)](https://x.com/RalphEcom)
 
 A task management system for AI-driven development with Claude, designed to work seamlessly with Cursor AI.
 
-## Licensing
-
-Task Master is licensed under the MIT License with Commons Clause. This means you can:
-
-✅ **Allowed**:
-
-- Use Task Master for any purpose (personal, commercial, academic)
-- Modify the code
-- Distribute copies
-- Create and sell products built using Task Master
-
-❌ **Not Allowed**:
-
-- Sell Task Master itself
-- Offer Task Master as a hosted service
-- Create competing products based on Task Master
-
-See the [LICENSE](LICENSE) file for the complete license text.
-
 ## Requirements
 
-- Node.js 14.0.0 or higher
 - Anthropic API key (Claude API)
-- Anthropic SDK version 0.39.0 or higher
 - OpenAI SDK (for Perplexity API integration, optional)
 
-## Configuration
+## Quick Start
 
-The script can be configured through environment variables in a `.env` file at the root of the project:
+### Option 1 | MCP (Recommended):
 
-### Required Configuration
+MCP (Model Control Protocol) provides the easiest way to get started with Task Master directly in your editor.
 
-- `ANTHROPIC_API_KEY`: Your Anthropic API key for Claude
+1. **Add the MCP config to your editor** (Cursor recommended, but it works with other text editors):
 
-### Optional Configuration
+```json
+{
+	"mcpServers": {
+		"taskmaster-ai": {
+			"command": "npx",
+			"args": ["-y", "task-master-mcp"],
+			"env": {
+				"ANTHROPIC_API_KEY": "YOUR_ANTHROPIC_API_KEY_HERE",
+				"PERPLEXITY_API_KEY": "YOUR_PERPLEXITY_API_KEY_HERE",
+				"MODEL": "claude-3-7-sonnet-20250219",
+				"PERPLEXITY_MODEL": "sonar-pro",
+				"MAX_TOKENS": 64000,
+				"TEMPERATURE": 0.2,
+				"DEFAULT_SUBTASKS": 5,
+				"DEFAULT_PRIORITY": "medium"
+			}
+		}
+	}
+}
+```
 
-- `MODEL`: Specify which Claude model to use (default: "claude-3-7-sonnet-20250219")
-- `MAX_TOKENS`: Maximum tokens for model responses (default: 4000)
-- `TEMPERATURE`: Temperature for model responses (default: 0.7)
-- `PERPLEXITY_API_KEY`: Your Perplexity API key for research-backed subtask generation
-- `PERPLEXITY_MODEL`: Specify which Perplexity model to use (default: "sonar-medium-online")
-- `DEBUG`: Enable debug logging (default: false)
-- `LOG_LEVEL`: Log level - debug, info, warn, error (default: info)
-- `DEFAULT_SUBTASKS`: Default number of subtasks when expanding (default: 3)
-- `DEFAULT_PRIORITY`: Default priority for generated tasks (default: medium)
-- `PROJECT_NAME`: Override default project name in tasks.json
-- `PROJECT_VERSION`: Override default version in tasks.json
+2. **Enable the MCP** in your editor
 
-## Installation
+3. **Prompt the AI** to initialize Task Master:
+
+```
+Can you please initialize taskmaster-ai into my project?
+```
+
+4. **Use common commands** directly through your AI assistant:
+
+```txt
+Can you parse my PRD at scripts/prd.txt?
+What's the next task I should work on?
+Can you help me implement task 3?
+Can you help me expand task 4?
+```
+
+### Option 2: Using Command Line
+
+#### Installation
 
 ```bash
 # Install globally
@@ -66,7 +72,7 @@ npm install -g task-master-ai
 npm install task-master-ai
 ```
 
-### Initialize a new project
+#### Initialize a new project
 
 ```bash
 # If installed globally
@@ -78,14 +84,7 @@ npx task-master-init
 
 This will prompt you for project details and set up a new project with the necessary files and structure.
 
-### Important Notes
-
-1. This package uses ES modules. Your package.json should include `"type": "module"`.
-2. The Anthropic SDK version should be 0.39.0 or higher.
-
-## Quick Start with Global Commands
-
-After installing the package globally, you can use these CLI commands from any directory:
+#### Common Commands
 
 ```bash
 # Initialize a new project
@@ -104,6 +103,16 @@ task-master next
 task-master generate
 ```
 
+## Documentation
+
+For more detailed information, check out the documentation in the `docs` directory:
+
+- [Configuration Guide](docs/configuration.md) - Set up environment variables and customize Task Master
+- [Tutorial](docs/tutorial.md) - Step-by-step guide to getting started with Task Master
+- [Command Reference](docs/command-reference.md) - Complete list of all available commands
+- [Task Structure](docs/task-structure.md) - Understanding the task format and features
+- [Example Interactions](docs/examples.md) - Common Cursor AI interaction examples
+
 ## Troubleshooting
 
 ### If `task-master init` doesn't respond:
@@ -122,577 +131,31 @@ cd claude-task-master
 node scripts/init.js
 ```
 
-## Task Structure
+## Contributors
 
-Tasks in tasks.json have the following structure:
+<a href="https://github.com/eyaltoledano/claude-task-master/graphs/contributors">
+  <img src="https://contrib.rocks/image?repo=eyaltoledano/claude-task-master" alt="Task Master project contributors" />
+</a>
 
-- `id`: Unique identifier for the task (Example: `1`)
-- `title`: Brief, descriptive title of the task (Example: `"Initialize Repo"`)
-- `description`: Concise description of what the task involves (Example: `"Create a new repository, set up initial structure."`)
-- `status`: Current state of the task (Example: `"pending"`, `"done"`, `"deferred"`)
-- `dependencies`: IDs of tasks that must be completed before this task (Example: `[1, 2]`)
-  - Dependencies are displayed with status indicators (✅ for completed, ⏱️ for pending)
-  - This helps quickly identify which prerequisite tasks are blocking work
-- `priority`: Importance level of the task (Example: `"high"`, `"medium"`, `"low"`)
-- `details`: In-depth implementation instructions (Example: `"Use GitHub client ID/secret, handle callback, set session token."`)
-- `testStrategy`: Verification approach (Example: `"Deploy and call endpoint to confirm 'Hello World' response."`)
-- `subtasks`: List of smaller, more specific tasks that make up the main task (Example: `[{"id": 1, "title": "Configure OAuth", ...}]`)
+## Star History
 
-## Integrating with Cursor AI
+[![Star History Chart](https://api.star-history.com/svg?repos=eyaltoledano/claude-task-master&type=Timeline)](https://www.star-history.com/#eyaltoledano/claude-task-master&Timeline)
 
-Claude Task Master is designed to work seamlessly with [Cursor AI](https://www.cursor.so/), providing a structured workflow for AI-driven development.
+## Licensing
 
-### Setup with Cursor
+Task Master is licensed under the MIT License with Commons Clause. This means you can:
 
-1. After initializing your project, open it in Cursor
-2. The `.cursor/rules/dev_workflow.mdc` file is automatically loaded by Cursor, providing the AI with knowledge about the task management system
-3. Place your PRD document in the `scripts/` directory (e.g., `scripts/prd.txt`)
-4. Open Cursor's AI chat and switch to Agent mode
+✅ **Allowed**:
 
-### Setting up MCP in Cursor
+- Use Task Master for any purpose (personal, commercial, academic)
+- Modify the code
+- Distribute copies
+- Create and sell products built using Task Master
 
-To enable enhanced task management capabilities directly within Cursor using the Model Control Protocol (MCP):
+❌ **Not Allowed**:
 
-1. Go to Cursor settings
-2. Navigate to the MCP section
-3. Click on "Add New MCP Server"
-4. Configure with the following details:
-   - Name: "Task Master"
-   - Type: "Command"
-   - Command: "npx -y --package task-master-ai task-master-mcp"
-5. Save the settings
+- Sell Task Master itself
+- Offer Task Master as a hosted service
+- Create competing products based on Task Master
 
-Once configured, you can interact with Task Master's task management commands directly through Cursor's interface, providing a more integrated experience.
-
-### Initial Task Generation
-
-In Cursor's AI chat, instruct the agent to generate tasks from your PRD:
-
-```
-Please use the task-master parse-prd command to generate tasks from my PRD. The PRD is located at scripts/prd.txt.
-```
-
-The agent will execute:
-
-```bash
-task-master parse-prd scripts/prd.txt
-```
-
-This will:
-
-- Parse your PRD document
-- Generate a structured `tasks.json` file with tasks, dependencies, priorities, and test strategies
-- The agent will understand this process due to the Cursor rules
-
-### Generate Individual Task Files
-
-Next, ask the agent to generate individual task files:
-
-```
-Please generate individual task files from tasks.json
-```
-
-The agent will execute:
-
-```bash
-task-master generate
-```
-
-This creates individual task files in the `tasks/` directory (e.g., `task_001.txt`, `task_002.txt`), making it easier to reference specific tasks.
-
-## AI-Driven Development Workflow
-
-The Cursor agent is pre-configured (via the rules file) to follow this workflow:
-
-### 1. Task Discovery and Selection
-
-Ask the agent to list available tasks:
-
-```
-What tasks are available to work on next?
-```
-
-The agent will:
-
-- Run `task-master list` to see all tasks
-- Run `task-master next` to determine the next task to work on
-- Analyze dependencies to determine which tasks are ready to be worked on
-- Prioritize tasks based on priority level and ID order
-- Suggest the next task(s) to implement
-
-### 2. Task Implementation
-
-When implementing a task, the agent will:
-
-- Reference the task's details section for implementation specifics
-- Consider dependencies on previous tasks
-- Follow the project's coding standards
-- Create appropriate tests based on the task's testStrategy
-
-You can ask:
-
-```
-Let's implement task 3. What does it involve?
-```
-
-### 3. Task Verification
-
-Before marking a task as complete, verify it according to:
-
-- The task's specified testStrategy
-- Any automated tests in the codebase
-- Manual verification if required
-
-### 4. Task Completion
-
-When a task is completed, tell the agent:
-
-```
-Task 3 is now complete. Please update its status.
-```
-
-The agent will execute:
-
-```bash
-task-master set-status --id=3 --status=done
-```
-
-### 5. Handling Implementation Drift
-
-If during implementation, you discover that:
-
-- The current approach differs significantly from what was planned
-- Future tasks need to be modified due to current implementation choices
-- New dependencies or requirements have emerged
-
-Tell the agent:
-
-```
-We've changed our approach. We're now using Express instead of Fastify. Please update all future tasks to reflect this change.
-```
-
-The agent will execute:
-
-```bash
-task-master update --from=4 --prompt="Now we are using Express instead of Fastify."
-```
-
-This will rewrite or re-scope subsequent tasks in tasks.json while preserving completed work.
-
-### 6. Breaking Down Complex Tasks
-
-For complex tasks that need more granularity:
-
-```
-Task 5 seems complex. Can you break it down into subtasks?
-```
-
-The agent will execute:
-
-```bash
-task-master expand --id=5 --num=3
-```
-
-You can provide additional context:
-
-```
-Please break down task 5 with a focus on security considerations.
-```
-
-The agent will execute:
-
-```bash
-task-master expand --id=5 --prompt="Focus on security aspects"
-```
-
-You can also expand all pending tasks:
-
-```
-Please break down all pending tasks into subtasks.
-```
-
-The agent will execute:
-
-```bash
-task-master expand --all
-```
-
-For research-backed subtask generation using Perplexity AI:
-
-```
-Please break down task 5 using research-backed generation.
-```
-
-The agent will execute:
-
-```bash
-task-master expand --id=5 --research
-```
-
-## Command Reference
-
-Here's a comprehensive reference of all available commands:
-
-### Parse PRD
-
-```bash
-# Parse a PRD file and generate tasks
-task-master parse-prd <prd-file.txt>
-
-# Limit the number of tasks generated
-task-master parse-prd <prd-file.txt> --num-tasks=10
-```
-
-### List Tasks
-
-```bash
-# List all tasks
-task-master list
-
-# List tasks with a specific status
-task-master list --status=<status>
-
-# List tasks with subtasks
-task-master list --with-subtasks
-
-# List tasks with a specific status and include subtasks
-task-master list --status=<status> --with-subtasks
-```
-
-### Show Next Task
-
-```bash
-# Show the next task to work on based on dependencies and status
-task-master next
-```
-
-### Show Specific Task
-
-```bash
-# Show details of a specific task
-task-master show <id>
-# or
-task-master show --id=<id>
-
-# View a specific subtask (e.g., subtask 2 of task 1)
-task-master show 1.2
-```
-
-### Update Tasks
-
-```bash
-# Update tasks from a specific ID and provide context
-task-master update --from=<id> --prompt="<prompt>"
-```
-
-### Update a Specific Task
-
-```bash
-# Update a single task by ID with new information
-task-master update-task --id=<id> --prompt="<prompt>"
-
-# Use research-backed updates with Perplexity AI
-task-master update-task --id=<id> --prompt="<prompt>" --research
-```
-
-### Update a Subtask
-
-```bash
-# Append additional information to a specific subtask
-task-master update-subtask --id=<parentId.subtaskId> --prompt="<prompt>"
-
-# Example: Add details about API rate limiting to subtask 2 of task 5
-task-master update-subtask --id=5.2 --prompt="Add rate limiting of 100 requests per minute"
-
-# Use research-backed updates with Perplexity AI
-task-master update-subtask --id=<parentId.subtaskId> --prompt="<prompt>" --research
-```
-
-Unlike the `update-task` command which replaces task information, the `update-subtask` command _appends_ new information to the existing subtask details, marking it with a timestamp. This is useful for iteratively enhancing subtasks while preserving the original content.
-
-### Remove Task
-
-```bash
-# Remove a task permanently
-task-master remove-task --id=<id>
-
-# Remove a subtask permanently
-task-master remove-task --id=<parentId.subtaskId>
-
-# Skip the confirmation prompt
-task-master remove-task --id=<id> --yes
-```
-
-The `remove-task` command permanently deletes a task or subtask from `tasks.json`. It also automatically cleans up any references to the deleted task in other tasks' dependencies. Consider using 'blocked', 'cancelled', or 'deferred' status instead if you want to keep the task for reference.
-
-### Generate Task Files
-
-```bash
-# Generate individual task files from tasks.json
-task-master generate
-```
-
-### Set Task Status
-
-```bash
-# Set status of a single task
-task-master set-status --id=<id> --status=<status>
-
-# Set status for multiple tasks
-task-master set-status --id=1,2,3 --status=<status>
-
-# Set status for subtasks
-task-master set-status --id=1.1,1.2 --status=<status>
-```
-
-When marking a task as "done", all of its subtasks will automatically be marked as "done" as well.
-
-### Expand Tasks
-
-```bash
-# Expand a specific task with subtasks
-task-master expand --id=<id> --num=<number>
-
-# Expand with additional context
-task-master expand --id=<id> --prompt="<context>"
-
-# Expand all pending tasks
-task-master expand --all
-
-# Force regeneration of subtasks for tasks that already have them
-task-master expand --all --force
-
-# Research-backed subtask generation for a specific task
-task-master expand --id=<id> --research
-
-# Research-backed generation for all tasks
-task-master expand --all --research
-```
-
-### Clear Subtasks
-
-```bash
-# Clear subtasks from a specific task
-task-master clear-subtasks --id=<id>
-
-# Clear subtasks from multiple tasks
-task-master clear-subtasks --id=1,2,3
-
-# Clear subtasks from all tasks
-task-master clear-subtasks --all
-```
-
-### Analyze Task Complexity
-
-```bash
-# Analyze complexity of all tasks
-task-master analyze-complexity
-
-# Save report to a custom location
-task-master analyze-complexity --output=my-report.json
-
-# Use a specific LLM model
-task-master analyze-complexity --model=claude-3-opus-20240229
-
-# Set a custom complexity threshold (1-10)
-task-master analyze-complexity --threshold=6
-
-# Use an alternative tasks file
-task-master analyze-complexity --file=custom-tasks.json
-
-# Use Perplexity AI for research-backed complexity analysis
-task-master analyze-complexity --research
-```
-
-### View Complexity Report
-
-```bash
-# Display the task complexity analysis report
-task-master complexity-report
-
-# View a report at a custom location
-task-master complexity-report --file=my-report.json
-```
-
-### Managing Task Dependencies
-
-```bash
-# Add a dependency to a task
-task-master add-dependency --id=<id> --depends-on=<id>
-
-# Remove a dependency from a task
-task-master remove-dependency --id=<id> --depends-on=<id>
-
-# Validate dependencies without fixing them
-task-master validate-dependencies
-
-# Find and fix invalid dependencies automatically
-task-master fix-dependencies
-```
-
-### Add a New Task
-
-```bash
-# Add a new task using AI
-task-master add-task --prompt="Description of the new task"
-
-# Add a task with dependencies
-task-master add-task --prompt="Description" --dependencies=1,2,3
-
-# Add a task with priority
-task-master add-task --prompt="Description" --priority=high
-```
-
-## Feature Details
-
-### Analyzing Task Complexity
-
-The `analyze-complexity` command:
-
-- Analyzes each task using AI to assess its complexity on a scale of 1-10
-- Recommends optimal number of subtasks based on configured DEFAULT_SUBTASKS
-- Generates tailored prompts for expanding each task
-- Creates a comprehensive JSON report with ready-to-use commands
-- Saves the report to scripts/task-complexity-report.json by default
-
-The generated report contains:
-
-- Complexity analysis for each task (scored 1-10)
-- Recommended number of subtasks based on complexity
-- AI-generated expansion prompts customized for each task
-- Ready-to-run expansion commands directly within each task analysis
-
-### Viewing Complexity Report
-
-The `complexity-report` command:
-
-- Displays a formatted, easy-to-read version of the complexity analysis report
-- Shows tasks organized by complexity score (highest to lowest)
-- Provides complexity distribution statistics (low, medium, high)
-- Highlights tasks recommended for expansion based on threshold score
-- Includes ready-to-use expansion commands for each complex task
-- If no report exists, offers to generate one on the spot
-
-### Smart Task Expansion
-
-The `expand` command automatically checks for and uses the complexity report:
-
-When a complexity report exists:
-
-- Tasks are automatically expanded using the recommended subtask count and prompts
-- When expanding all tasks, they're processed in order of complexity (highest first)
-- Research-backed generation is preserved from the complexity analysis
-- You can still override recommendations with explicit command-line options
-
-Example workflow:
-
-```bash
-# Generate the complexity analysis report with research capabilities
-task-master analyze-complexity --research
-
-# Review the report in a readable format
-task-master complexity-report
-
-# Expand tasks using the optimized recommendations
-task-master expand --id=8
-# or expand all tasks
-task-master expand --all
-```
-
-### Finding the Next Task
-
-The `next` command:
-
-- Identifies tasks that are pending/in-progress and have all dependencies satisfied
-- Prioritizes tasks by priority level, dependency count, and task ID
-- Displays comprehensive information about the selected task:
-  - Basic task details (ID, title, priority, dependencies)
-  - Implementation details
-  - Subtasks (if they exist)
-- Provides contextual suggested actions:
-  - Command to mark the task as in-progress
-  - Command to mark the task as done
-  - Commands for working with subtasks
-
-### Viewing Specific Task Details
-
-The `show` command:
-
-- Displays comprehensive details about a specific task or subtask
-- Shows task status, priority, dependencies, and detailed implementation notes
-- For parent tasks, displays all subtasks and their status
-- For subtasks, shows parent task relationship
-- Provides contextual action suggestions based on the task's state
-- Works with both regular tasks and subtasks (using the format taskId.subtaskId)
-
-## Best Practices for AI-Driven Development
-
-1. **Start with a detailed PRD**: The more detailed your PRD, the better the generated tasks will be.
-
-2. **Review generated tasks**: After parsing the PRD, review the tasks to ensure they make sense and have appropriate dependencies.
-
-3. **Analyze task complexity**: Use the complexity analysis feature to identify which tasks should be broken down further.
-
-4. **Follow the dependency chain**: Always respect task dependencies - the Cursor agent will help with this.
-
-5. **Update as you go**: If your implementation diverges from the plan, use the update command to keep future tasks aligned with your current approach.
-
-6. **Break down complex tasks**: Use the expand command to break down complex tasks into manageable subtasks.
-
-7. **Regenerate task files**: After any updates to tasks.json, regenerate the task files to keep them in sync.
-
-8. **Communicate context to the agent**: When asking the Cursor agent to help with a task, provide context about what you're trying to achieve.
-
-9. **Validate dependencies**: Periodically run the validate-dependencies command to check for invalid or circular dependencies.
-
-## Example Cursor AI Interactions
-
-### Starting a new project
-
-```
-I've just initialized a new project with Claude Task Master. I have a PRD at scripts/prd.txt.
-Can you help me parse it and set up the initial tasks?
-```
-
-### Working on tasks
-
-```
-What's the next task I should work on? Please consider dependencies and priorities.
-```
-
-### Implementing a specific task
-
-```
-I'd like to implement task 4. Can you help me understand what needs to be done and how to approach it?
-```
-
-### Managing subtasks
-
-```
-I need to regenerate the subtasks for task 3 with a different approach. Can you help me clear and regenerate them?
-```
-
-### Handling changes
-
-```
-We've decided to use MongoDB instead of PostgreSQL. Can you update all future tasks to reflect this change?
-```
-
-### Completing work
-
-```
-I've finished implementing the authentication system described in task 2. All tests are passing.
-Please mark it as complete and tell me what I should work on next.
-```
-
-### Analyzing complexity
-
-```
-Can you analyze the complexity of our tasks to help me understand which ones need to be broken down further?
-```
-
-### Viewing complexity report
-
-```
-Can you show me the complexity report in a more readable format?
-```
+See the [LICENSE](LICENSE) file for the complete license text and [licensing details](docs/licensing.md) for more information.

assets/scripts_README.md

@@ -21,9 +21,11 @@ In an AI-driven development process—particularly with tools like [Cursor](http
 The script can be configured through environment variables in a `.env` file at the root of the project:
 
 ### Required Configuration
+
 - `ANTHROPIC_API_KEY`: Your Anthropic API key for Claude
 
 ### Optional Configuration
+
 - `MODEL`: Specify which Claude model to use (default: "claude-3-7-sonnet-20250219")
 - `MAX_TOKENS`: Maximum tokens for model responses (default: 4000)
 - `TEMPERATURE`: Temperature for model responses (default: 0.7)
@@ -39,6 +41,7 @@ The script can be configured through environment variables in a `.env` file at t
 ## How It Works
 
 1. **`tasks.json`**:
+
    - A JSON file at the project root containing an array of tasks (each with `id`, `title`, `description`, `status`, etc.).
    - The `meta` field can store additional info like the project's name, version, or reference to the PRD.
    - Tasks can have `subtasks` for more detailed implementation steps.
@@ -111,6 +114,7 @@ task-master update --file=custom-tasks.json --from=5 --prompt="Change database f
 ```
 
 Notes:
+
 - The `--prompt` parameter is required and should explain the changes or new context
 - Only tasks that aren't marked as 'done' will be updated
 - Tasks with ID >= the specified --from value will be updated
@@ -134,6 +138,7 @@ task-master set-status --id=1,2,3 --status=done
 ```
 
 Notes:
+
 - When marking a parent task as "done", all of its subtasks will automatically be marked as "done" as well
 - Common status values are 'done', 'pending', and 'deferred', but any string is accepted
 - You can specify multiple task IDs by separating them with commas
@@ -183,6 +188,7 @@ task-master clear-subtasks --all
 ```
 
 Notes:
+
 - After clearing subtasks, task files are automatically regenerated
 - This is useful when you want to regenerate subtasks with a different approach
 - Can be combined with the `expand` command to immediately generate new subtasks
@@ -198,6 +204,7 @@ The script integrates with two AI services:
 The Perplexity integration uses the OpenAI client to connect to Perplexity's API, which provides enhanced research capabilities for generating more informed subtasks. If the Perplexity API is unavailable or encounters an error, the script will automatically fall back to using Anthropic's Claude.
 
 To use the Perplexity integration:
+
 1. Obtain a Perplexity API key
 2. Add `PERPLEXITY_API_KEY` to your `.env` file
 3. Optionally specify `PERPLEXITY_MODEL` in your `.env` file (default: "sonar-medium-online")
@@ -206,6 +213,7 @@ To use the Perplexity integration:
 ## Logging
 
 The script supports different logging levels controlled by the `LOG_LEVEL` environment variable:
+
 - `debug`: Detailed information, typically useful for troubleshooting
 - `info`: Confirmation that things are working as expected (default)
 - `warn`: Warning messages that don't prevent execution
@@ -228,17 +236,20 @@ task-master remove-dependency --id=<id> --depends-on=<id>
 These commands:
 
 1. **Allow precise dependency management**:
+
    - Add dependencies between tasks with automatic validation
    - Remove dependencies when they're no longer needed
    - Update task files automatically after changes
 
 2. **Include validation checks**:
+
    - Prevent circular dependencies (a task depending on itself)
    - Prevent duplicate dependencies
    - Verify that both tasks exist before adding/removing dependencies
    - Check if dependencies exist before attempting to remove them
 
 3. **Provide clear feedback**:
+
    - Success messages confirm when dependencies are added/removed
    - Error messages explain why operations failed (if applicable)
 
@@ -263,6 +274,7 @@ task-master validate-dependencies --file=custom-tasks.json
 ```
 
 This command:
+
 - Scans all tasks and subtasks for non-existent dependencies
 - Identifies potential self-dependencies (tasks referencing themselves)
 - Reports all found issues without modifying files
@@ -284,6 +296,7 @@ task-master fix-dependencies --file=custom-tasks.json
 ```
 
 This command:
+
 1. **Validates all dependencies** across tasks and subtasks
 2. **Automatically removes**:
    - References to non-existent tasks and subtasks
@@ -321,6 +334,7 @@ task-master analyze-complexity --research
 ```
 
 Notes:
+
 - The command uses Claude to analyze each task's complexity (or Perplexity with --research flag)
 - Tasks are scored on a scale of 1-10
 - Each task receives a recommended number of subtasks based on DEFAULT_SUBTASKS configuration
@@ -345,33 +359,35 @@ task-master expand --id=8 --num=5 --prompt="Custom prompt"
 ```
 
 When a complexity report exists:
+
 - The `expand` command will use the recommended subtask count from the report (unless overridden)
 - It will use the tailored expansion prompt from the report (unless a custom prompt is provided)
 - When using `--all`, tasks are sorted by complexity score (highest first)
 - The `--research` flag is preserved from the complexity analysis to expansion
 
 The output report structure is:
+
 ```json
 {
-  "meta": {
-    "generatedAt": "2023-06-15T12:34:56.789Z",
-    "tasksAnalyzed": 20,
-    "thresholdScore": 5,
-    "projectName": "Your Project Name",
-    "usedResearch": true
-  },
-  "complexityAnalysis": [
-    {
-      "taskId": 8,
-      "taskTitle": "Develop Implementation Drift Handling",
-      "complexityScore": 9.5,
-      "recommendedSubtasks": 6,
-      "expansionPrompt": "Create subtasks that handle detecting...",
-      "reasoning": "This task requires sophisticated logic...",
-      "expansionCommand": "task-master expand --id=8 --num=6 --prompt=\"Create subtasks...\" --research"
-    },
-    // More tasks sorted by complexity score (highest first)
-  ]
+	"meta": {
+		"generatedAt": "2023-06-15T12:34:56.789Z",
+		"tasksAnalyzed": 20,
+		"thresholdScore": 5,
+		"projectName": "Your Project Name",
+		"usedResearch": true
+	},
+	"complexityAnalysis": [
+		{
+			"taskId": 8,
+			"taskTitle": "Develop Implementation Drift Handling",
+			"complexityScore": 9.5,
+			"recommendedSubtasks": 6,
+			"expansionPrompt": "Create subtasks that handle detecting...",
+			"reasoning": "This task requires sophisticated logic...",
+			"expansionCommand": "task-master expand --id=8 --num=6 --prompt=\"Create subtasks...\" --research"
+		}
+		// More tasks sorted by complexity score (highest first)
+	]
 }
 ```
 

bin/task-master-init.js

@@ -1,30 +0,0 @@
-#!/usr/bin/env node
-
-/**
- * Claude Task Master Init
- * Direct executable for the init command
- */
-
-import { spawn } from 'child_process';
-import { fileURLToPath } from 'url';
-import { dirname, resolve } from 'path';
-
-const __filename = fileURLToPath(import.meta.url);
-const __dirname = dirname(__filename);
-
-// Get the path to the init script
-const initScriptPath = resolve(__dirname, '../scripts/init.js');
-
-// Pass through all arguments
-const args = process.argv.slice(2);
-
-// Spawn the init script with all arguments
-const child = spawn('node', [initScriptPath, ...args], {
-  stdio: 'inherit',
-  cwd: process.cwd()
-});
-
-// Handle exit
-child.on('close', (code) => {
-  process.exit(code);
-}); 

bin/task-master.js

@@ -1,4 +1,4 @@
-#!/usr/bin/env node
+#!/usr/bin/env node --trace-deprecation
 
 /**
  * Task Master
@@ -44,30 +44,36 @@ const initScriptPath = resolve(__dirname, '../scripts/init.js');
 
 // Helper function to run dev.js with arguments
 function runDevScript(args) {
-  // Debug: Show the transformed arguments when DEBUG=1 is set
-  if (process.env.DEBUG === '1') {
-    console.error('\nDEBUG - CLI Wrapper Analysis:');
-    console.error('- Original command: ' + process.argv.join(' '));
-    console.error('- Transformed args: ' + args.join(' '));
-    console.error('- dev.js will receive: node ' + devScriptPath + ' ' + args.join(' ') + '\n');
-  }
+	// Debug: Show the transformed arguments when DEBUG=1 is set
+	if (process.env.DEBUG === '1') {
+		console.error('\nDEBUG - CLI Wrapper Analysis:');
+		console.error('- Original command: ' + process.argv.join(' '));
+		console.error('- Transformed args: ' + args.join(' '));
+		console.error(
+			'- dev.js will receive: node ' +
+				devScriptPath +
+				' ' +
+				args.join(' ') +
+				'\n'
+		);
+	}
 
-  // For testing: If TEST_MODE is set, just print args and exit
-  if (process.env.TEST_MODE === '1') {
-    console.log('Would execute:');
-    console.log(`node ${devScriptPath} ${args.join(' ')}`);
-    process.exit(0);
-    return;
-  }
+	// For testing: If TEST_MODE is set, just print args and exit
+	if (process.env.TEST_MODE === '1') {
+		console.log('Would execute:');
+		console.log(`node ${devScriptPath} ${args.join(' ')}`);
+		process.exit(0);
+		return;
+	}
 
-  const child = spawn('node', [devScriptPath, ...args], {
-    stdio: 'inherit',
-    cwd: process.cwd()
-  });
+	const child = spawn('node', [devScriptPath, ...args], {
+		stdio: 'inherit',
+		cwd: process.cwd()
+	});
 
-  child.on('close', (code) => {
-    process.exit(code);
-  });
+	child.on('close', (code) => {
+		process.exit(code);
+	});
 }
 
 // Helper function to detect camelCase and convert to kebab-case
@@ -79,228 +85,239 @@ const toKebabCase = (str) => str.replace(/([A-Z])/g, '-$1').toLowerCase();
  * @returns {Function} Wrapper action function
  */
 function createDevScriptAction(commandName) {
-  return (options, cmd) => {
-    // Check for camelCase flags and error out with helpful message
-    const camelCaseFlags = detectCamelCaseFlags(process.argv);
+	return (options, cmd) => {
+		// Check for camelCase flags and error out with helpful message
+		const camelCaseFlags = detectCamelCaseFlags(process.argv);
 
-    // If camelCase flags were found, show error and exit
-    if (camelCaseFlags.length > 0) {
-      console.error('\nError: Please use kebab-case for CLI flags:');
-      camelCaseFlags.forEach(flag => {
-        console.error(`  Instead of: --${flag.original}`);
-        console.error(`  Use:        --${flag.kebabCase}`);
-      });
-      console.error('\nExample: task-master parse-prd --num-tasks=5 instead of --numTasks=5\n');
-      process.exit(1);
-    }
+		// If camelCase flags were found, show error and exit
+		if (camelCaseFlags.length > 0) {
+			console.error('\nError: Please use kebab-case for CLI flags:');
+			camelCaseFlags.forEach((flag) => {
+				console.error(`  Instead of: --${flag.original}`);
+				console.error(`  Use:        --${flag.kebabCase}`);
+			});
+			console.error(
+				'\nExample: task-master parse-prd --num-tasks=5 instead of --numTasks=5\n'
+			);
+			process.exit(1);
+		}
 
-    // Since we've ensured no camelCase flags, we can now just:
-    // 1. Start with the command name
-    const args = [commandName];
+		// Since we've ensured no camelCase flags, we can now just:
+		// 1. Start with the command name
+		const args = [commandName];
 
-    // 3. Get positional arguments and explicit flags from the command line
-    const commandArgs = [];
-    const positionals = new Set(); // Track positional args we've seen
+		// 3. Get positional arguments and explicit flags from the command line
+		const commandArgs = [];
+		const positionals = new Set(); // Track positional args we've seen
 
-    // Find the command in raw process.argv to extract args
-    const commandIndex = process.argv.indexOf(commandName);
-    if (commandIndex !== -1) {
-      // Process all args after the command name
-      for (let i = commandIndex + 1; i < process.argv.length; i++) {
-        const arg = process.argv[i];
+		// Find the command in raw process.argv to extract args
+		const commandIndex = process.argv.indexOf(commandName);
+		if (commandIndex !== -1) {
+			// Process all args after the command name
+			for (let i = commandIndex + 1; i < process.argv.length; i++) {
+				const arg = process.argv[i];
 
-        if (arg.startsWith('--')) {
-          // It's a flag - pass through as is
-          commandArgs.push(arg);
-          // Skip the next arg if this is a flag with a value (not --flag=value format)
-          if (!arg.includes('=') && 
-              i + 1 < process.argv.length && 
-              !process.argv[i+1].startsWith('--')) {
-            commandArgs.push(process.argv[++i]);
-          }
-        } else if (!positionals.has(arg)) {
-          // It's a positional argument we haven't seen
-          commandArgs.push(arg);
-          positionals.add(arg);
-        }
-      }
-    }
+				if (arg.startsWith('--')) {
+					// It's a flag - pass through as is
+					commandArgs.push(arg);
+					// Skip the next arg if this is a flag with a value (not --flag=value format)
+					if (
+						!arg.includes('=') &&
+						i + 1 < process.argv.length &&
+						!process.argv[i + 1].startsWith('--')
+					) {
+						commandArgs.push(process.argv[++i]);
+					}
+				} else if (!positionals.has(arg)) {
+					// It's a positional argument we haven't seen
+					commandArgs.push(arg);
+					positionals.add(arg);
+				}
+			}
+		}
 
-    // Add all command line args we collected
-    args.push(...commandArgs);
+		// Add all command line args we collected
+		args.push(...commandArgs);
 
-    // 4. Add default options from Commander if not specified on command line
-    // Track which options we've seen on the command line
-    const userOptions = new Set();
-    for (const arg of commandArgs) {
-      if (arg.startsWith('--')) {
-        // Extract option name (without -- and value)
-        const name = arg.split('=')[0].slice(2);
-        userOptions.add(name);
+		// 4. Add default options from Commander if not specified on command line
+		// Track which options we've seen on the command line
+		const userOptions = new Set();
+		for (const arg of commandArgs) {
+			if (arg.startsWith('--')) {
+				// Extract option name (without -- and value)
+				const name = arg.split('=')[0].slice(2);
+				userOptions.add(name);
 
-        // Add the kebab-case version too, to prevent duplicates
-        const kebabName = name.replace(/([A-Z])/g, '-$1').toLowerCase();
-        userOptions.add(kebabName);
+				// Add the kebab-case version too, to prevent duplicates
+				const kebabName = name.replace(/([A-Z])/g, '-$1').toLowerCase();
+				userOptions.add(kebabName);
 
-        // Add the camelCase version as well
-        const camelName = kebabName.replace(/-([a-z])/g, (_, letter) => letter.toUpperCase());
-        userOptions.add(camelName);
-      }
-    }
+				// Add the camelCase version as well
+				const camelName = kebabName.replace(/-([a-z])/g, (_, letter) =>
+					letter.toUpperCase()
+				);
+				userOptions.add(camelName);
+			}
+		}
 
-    // Add Commander-provided defaults for options not specified by user
-    Object.entries(options).forEach(([key, value]) => {
-      // Debug output to see what keys we're getting
-      if (process.env.DEBUG === '1') {
-        console.error(`DEBUG - Processing option: ${key} = ${value}`);
-      }
+		// Add Commander-provided defaults for options not specified by user
+		Object.entries(options).forEach(([key, value]) => {
+			// Debug output to see what keys we're getting
+			if (process.env.DEBUG === '1') {
+				console.error(`DEBUG - Processing option: ${key} = ${value}`);
+			}
 
-      // Special case for numTasks > num-tasks (a known problem case)
-      if (key === 'numTasks') {
-        if (process.env.DEBUG === '1') {
-          console.error('DEBUG - Converting numTasks to num-tasks');
-        }
-        if (!userOptions.has('num-tasks') && !userOptions.has('numTasks')) {
-          args.push(`--num-tasks=${value}`);
-        }
-        return;
-      }
+			// Special case for numTasks > num-tasks (a known problem case)
+			if (key === 'numTasks') {
+				if (process.env.DEBUG === '1') {
+					console.error('DEBUG - Converting numTasks to num-tasks');
+				}
+				if (!userOptions.has('num-tasks') && !userOptions.has('numTasks')) {
+					args.push(`--num-tasks=${value}`);
+				}
+				return;
+			}
 
-      // Skip built-in Commander properties and options the user provided
-      if (['parent', 'commands', 'options', 'rawArgs'].includes(key) || userOptions.has(key)) {
-        return;
-      }
+			// Skip built-in Commander properties and options the user provided
+			if (
+				['parent', 'commands', 'options', 'rawArgs'].includes(key) ||
+				userOptions.has(key)
+			) {
+				return;
+			}
 
-      // Also check the kebab-case version of this key
-      const kebabKey = key.replace(/([A-Z])/g, '-$1').toLowerCase();
-      if (userOptions.has(kebabKey)) {
-        return;
-      }
+			// Also check the kebab-case version of this key
+			const kebabKey = key.replace(/([A-Z])/g, '-$1').toLowerCase();
+			if (userOptions.has(kebabKey)) {
+				return;
+			}
 
-      // Add default values, using kebab-case for the parameter name
-      if (value !== undefined) {
-        if (typeof value === 'boolean') {
-          if (value === true) {
-            args.push(`--${kebabKey}`);
-          } else if (value === false && key === 'generate') {
-            args.push('--skip-generate');
-          }
-        } else {
-          // Always use kebab-case for option names
-          args.push(`--${kebabKey}=${value}`);
-        }
-      }
-    });
+			// Add default values, using kebab-case for the parameter name
+			if (value !== undefined) {
+				if (typeof value === 'boolean') {
+					if (value === true) {
+						args.push(`--${kebabKey}`);
+					} else if (value === false && key === 'generate') {
+						args.push('--skip-generate');
+					}
+				} else {
+					// Always use kebab-case for option names
+					args.push(`--${kebabKey}=${value}`);
+				}
+			}
+		});
 
-    // Special handling for parent parameter (uses -p)
-    if (options.parent && !args.includes('-p') && !userOptions.has('parent')) {
-      args.push('-p', options.parent);
-    }
+		// Special handling for parent parameter (uses -p)
+		if (options.parent && !args.includes('-p') && !userOptions.has('parent')) {
+			args.push('-p', options.parent);
+		}
 
-    // Debug output for troubleshooting
-    if (process.env.DEBUG === '1') {
-      console.error('DEBUG - Command args:', commandArgs);
-      console.error('DEBUG - User options:', Array.from(userOptions));
-      console.error('DEBUG - Commander options:', options);
-      console.error('DEBUG - Final args:', args);
-    }
+		// Debug output for troubleshooting
+		if (process.env.DEBUG === '1') {
+			console.error('DEBUG - Command args:', commandArgs);
+			console.error('DEBUG - User options:', Array.from(userOptions));
+			console.error('DEBUG - Commander options:', options);
+			console.error('DEBUG - Final args:', args);
+		}
 
-    // Run the script with our processed args
-    runDevScript(args);
-  };
+		// Run the script with our processed args
+		runDevScript(args);
+	};
 }
 
-// Special case for the 'init' command which uses a different script
-function registerInitCommand(program) {
-  program
-    .command('init')
-    .description('Initialize a new project')
-    .option('-y, --yes', 'Skip prompts and use default values')
-    .option('-n, --name <name>', 'Project name')
-    .option('-d, --description <description>', 'Project description')
-    .option('-v, --version <version>', 'Project version')
-    .option('-a, --author <author>', 'Author name')
-    .option('--skip-install', 'Skip installing dependencies')
-    .option('--dry-run', 'Show what would be done without making changes')
-    .action((options) => {
-      // Pass through any options to the init script
-      const args = ['--yes', 'name', 'description', 'version', 'author', 'skip-install', 'dry-run']
-        .filter(opt => options[opt])
-        .map(opt => {
-          if (opt === 'yes' || opt === 'skip-install' || opt === 'dry-run') {
-            return `--${opt}`;
-          }
-          return `--${opt}=${options[opt]}`;
-        });
+// // Special case for the 'init' command which uses a different script
+// function registerInitCommand(program) {
+// 	program
+// 		.command('init')
+// 		.description('Initialize a new project')
+// 		.option('-y, --yes', 'Skip prompts and use default values')
+// 		.option('-n, --name <name>', 'Project name')
+// 		.option('-d, --description <description>', 'Project description')
+// 		.option('-v, --version <version>', 'Project version')
+// 		.option('-a, --author <author>', 'Author name')
+// 		.option('--skip-install', 'Skip installing dependencies')
+// 		.option('--dry-run', 'Show what would be done without making changes')
+// 		.action((options) => {
+// 			// Pass through any options to the init script
+// 			const args = [
+// 				'--yes',
+// 				'name',
+// 				'description',
+// 				'version',
+// 				'author',
+// 				'skip-install',
+// 				'dry-run'
+// 			]
+// 				.filter((opt) => options[opt])
+// 				.map((opt) => {
+// 					if (opt === 'yes' || opt === 'skip-install' || opt === 'dry-run') {
+// 						return `--${opt}`;
+// 					}
+// 					return `--${opt}=${options[opt]}`;
+// 				});
 
-      const child = spawn('node', [initScriptPath, ...args], {
-        stdio: 'inherit',
-        cwd: process.cwd()
-      });
+// 			const child = spawn('node', [initScriptPath, ...args], {
+// 				stdio: 'inherit',
+// 				cwd: process.cwd()
+// 			});
 
-      child.on('close', (code) => {
-        process.exit(code);
-      });
-    });
-}
+// 			child.on('close', (code) => {
+// 				process.exit(code);
+// 			});
+// 		});
+// }
 
 // Set up the command-line interface
 const program = new Command();
 
 program
-  .name('task-master')
-  .description('Claude Task Master CLI')
-  .version(version)
-  .addHelpText('afterAll', () => {
-    // Use the same help display function as dev.js for consistency
-    displayHelp();
-    return ''; // Return empty string to prevent commander's default help
-  });
+	.name('task-master')
+	.description('Claude Task Master CLI')
+	.version(version)
+	.addHelpText('afterAll', () => {
+		// Use the same help display function as dev.js for consistency
+		displayHelp();
+		return ''; // Return empty string to prevent commander's default help
+	});
 
 // Add custom help option to directly call our help display
 program.helpOption('-h, --help', 'Display help information');
 program.on('--help', () => {
-  displayHelp();
+	displayHelp();
 });
 
-// Add special case commands
-registerInitCommand(program);
+// // Add special case commands
+// registerInitCommand(program);
 
 program
-  .command('dev')
-  .description('Run the dev.js script')
-  .action(() => {
-    const args = process.argv.slice(process.argv.indexOf('dev') + 1);
-    runDevScript(args);
-  });
+	.command('dev')
+	.description('Run the dev.js script')
+	.action(() => {
+		const args = process.argv.slice(process.argv.indexOf('dev') + 1);
+		runDevScript(args);
+	});
 
 // Use a temporary Command instance to get all command definitions
 const tempProgram = new Command();
 registerCommands(tempProgram);
 
 // For each command in the temp instance, add a modified version to our actual program
-tempProgram.commands.forEach(cmd => {
-  if (['init', 'dev'].includes(cmd.name())) {
-    // Skip commands we've already defined specially
-    return;
-  }
+tempProgram.commands.forEach((cmd) => {
+	if (['dev'].includes(cmd.name())) {
+		// Skip commands we've already defined specially
+		return;
+	}
 
-  // Create a new command with the same name and description
-  const newCmd = program
-    .command(cmd.name())
-    .description(cmd.description());
+	// Create a new command with the same name and description
+	const newCmd = program.command(cmd.name()).description(cmd.description());
 
-  // Copy all options
-  cmd.options.forEach(opt => {
-    newCmd.option(
-      opt.flags,
-      opt.description,
-      opt.defaultValue
-    );
-  });
+	// Copy all options
+	cmd.options.forEach((opt) => {
+		newCmd.option(opt.flags, opt.description, opt.defaultValue);
+	});
 
-  // Set the action to proxy to dev.js
-  newCmd.action(createDevScriptAction(cmd.name()));
+	// Set the action to proxy to dev.js
+	newCmd.action(createDevScriptAction(cmd.name()));
 });
 
 // Parse the command line arguments
@@ -308,47 +325,56 @@ program.parse(process.argv);
 
 // Add global error handling for unknown commands and options
 process.on('uncaughtException', (err) => {
-  // Check if this is a commander.js unknown option error
-  if (err.code === 'commander.unknownOption') {
-    const option = err.message.match(/'([^']+)'/)?.[1];
-    const commandArg = process.argv.find(arg => !arg.startsWith('-') && 
-                                            arg !== 'task-master' && 
-                                            !arg.includes('/') && 
-                                            arg !== 'node');
-    const command = commandArg || 'unknown';
+	// Check if this is a commander.js unknown option error
+	if (err.code === 'commander.unknownOption') {
+		const option = err.message.match(/'([^']+)'/)?.[1];
+		const commandArg = process.argv.find(
+			(arg) =>
+				!arg.startsWith('-') &&
+				arg !== 'task-master' &&
+				!arg.includes('/') &&
+				arg !== 'node'
+		);
+		const command = commandArg || 'unknown';
 
-    console.error(chalk.red(`Error: Unknown option '${option}'`));
-    console.error(chalk.yellow(`Run 'task-master ${command} --help' to see available options for this command`));
-    process.exit(1);
-  }
+		console.error(chalk.red(`Error: Unknown option '${option}'`));
+		console.error(
+			chalk.yellow(
+				`Run 'task-master ${command} --help' to see available options for this command`
+			)
+		);
+		process.exit(1);
+	}
 
-  // Check if this is a commander.js unknown command error
-  if (err.code === 'commander.unknownCommand') {
-    const command = err.message.match(/'([^']+)'/)?.[1];
+	// Check if this is a commander.js unknown command error
+	if (err.code === 'commander.unknownCommand') {
+		const command = err.message.match(/'([^']+)'/)?.[1];
 
-    console.error(chalk.red(`Error: Unknown command '${command}'`));
-    console.error(chalk.yellow(`Run 'task-master --help' to see available commands`));
-    process.exit(1);
-  }
+		console.error(chalk.red(`Error: Unknown command '${command}'`));
+		console.error(
+			chalk.yellow(`Run 'task-master --help' to see available commands`)
+		);
+		process.exit(1);
+	}
 
-  // Handle other uncaught exceptions
-  console.error(chalk.red(`Error: ${err.message}`));
-  if (process.env.DEBUG === '1') {
-    console.error(err);
-  }
-  process.exit(1);
+	// Handle other uncaught exceptions
+	console.error(chalk.red(`Error: ${err.message}`));
+	if (process.env.DEBUG === '1') {
+		console.error(err);
+	}
+	process.exit(1);
 });
 
 // Show help if no command was provided (just 'task-master' with no args)
 if (process.argv.length <= 2) {
-  displayBanner();
-  displayHelp();
-  process.exit(0);
+	displayBanner();
+	displayHelp();
+	process.exit(0);
 }
 
 // Add exports at the end of the file
 if (typeof module !== 'undefined') {
-  module.exports = {
-    detectCamelCaseFlags
-  };
+	module.exports = {
+		detectCamelCaseFlags
+	};
 }

context/MCP_INTEGRATION.md

@@ -41,39 +41,39 @@ Core functions should follow this pattern to support both CLI and MCP use:
  * @returns {Object|undefined} - Returns data when source is 'mcp'
  */
 function exampleFunction(param1, param2, options = {}) {
-  try {
-    // Skip UI for MCP
-    if (options.source !== 'mcp') {
-      displayBanner();
-      console.log(chalk.blue('Processing operation...'));
-    }
+	try {
+		// Skip UI for MCP
+		if (options.source !== 'mcp') {
+			displayBanner();
+			console.log(chalk.blue('Processing operation...'));
+		}
 
-    // Do the core business logic
-    const result = doSomething(param1, param2);
+		// Do the core business logic
+		const result = doSomething(param1, param2);
 
-    // For MCP, return structured data
-    if (options.source === 'mcp') {
-      return {
-        success: true,
-        data: result
-      };
-    }
+		// For MCP, return structured data
+		if (options.source === 'mcp') {
+			return {
+				success: true,
+				data: result
+			};
+		}
 
-    // For CLI, display output
-    console.log(chalk.green('Operation completed successfully!'));
-  } catch (error) {
-    // Handle errors based on source
-    if (options.source === 'mcp') {
-      return {
-        success: false,
-        error: error.message
-      };
-    }
+		// For CLI, display output
+		console.log(chalk.green('Operation completed successfully!'));
+	} catch (error) {
+		// Handle errors based on source
+		if (options.source === 'mcp') {
+			return {
+				success: false,
+				error: error.message
+			};
+		}
 
-    // CLI error handling
-    console.error(chalk.red(`Error: ${error.message}`));
-    process.exit(1);
-  }
+		// CLI error handling
+		console.error(chalk.red(`Error: ${error.message}`));
+		process.exit(1);
+	}
 }
 ```
 
@@ -89,17 +89,17 @@ export const simpleFunction = adaptForMcp(originalFunction);
 
 // Split implementation - completely different code paths for CLI vs MCP
 export const complexFunction = sourceSplitFunction(
-  // CLI version with UI
-  function(param1, param2) {
-    displayBanner();
-    console.log(`Processing ${param1}...`);
-    // ... CLI implementation
-  },
-  // MCP version with structured return
-  function(param1, param2, options = {}) {
-    // ... MCP implementation
-    return { success: true, data };
-  }
+	// CLI version with UI
+	function (param1, param2) {
+		displayBanner();
+		console.log(`Processing ${param1}...`);
+		// ... CLI implementation
+	},
+	// MCP version with structured return
+	function (param1, param2, options = {}) {
+		// ... MCP implementation
+		return { success: true, data };
+	}
 );
 ```
 
@@ -119,39 +119,39 @@ When adding new features, follow these steps to ensure CLI and MCP compatibility
 ```javascript
 // In scripts/modules/task-manager.js
 export async function newFeature(param1, param2, options = {}) {
-  try {
-    // Source-specific UI
-    if (options.source !== 'mcp') {
-      displayBanner();
-      console.log(chalk.blue('Running new feature...'));
-    }
+	try {
+		// Source-specific UI
+		if (options.source !== 'mcp') {
+			displayBanner();
+			console.log(chalk.blue('Running new feature...'));
+		}
 
-    // Shared core logic
-    const result = processFeature(param1, param2);
+		// Shared core logic
+		const result = processFeature(param1, param2);
 
-    // Source-specific return handling
-    if (options.source === 'mcp') {
-      return {
-        success: true,
-        data: result
-      };
-    }
+		// Source-specific return handling
+		if (options.source === 'mcp') {
+			return {
+				success: true,
+				data: result
+			};
+		}
 
-    // CLI output
-    console.log(chalk.green('Feature completed successfully!'));
-    displayOutput(result);
-  } catch (error) {
-    // Error handling based on source
-    if (options.source === 'mcp') {
-      return {
-        success: false,
-        error: error.message
-      };
-    }
+		// CLI output
+		console.log(chalk.green('Feature completed successfully!'));
+		displayOutput(result);
+	} catch (error) {
+		// Error handling based on source
+		if (options.source === 'mcp') {
+			return {
+				success: false,
+				error: error.message
+			};
+		}
 
-    console.error(chalk.red(`Error: ${error.message}`));
-    process.exit(1);
-  }
+		console.error(chalk.red(`Error: ${error.message}`));
+		process.exit(1);
+	}
 }
 ```
 
@@ -163,12 +163,12 @@ import { newFeature } from '../../../scripts/modules/task-manager.js';
 
 // Add to exports
 export default {
-  // ... existing functions
+	// ... existing functions
 
-  async newFeature(args = {}, options = {}) {
-    const { param1, param2 } = args;
-    return executeFunction(newFeature, [param1, param2], options);
-  }
+	async newFeature(args = {}, options = {}) {
+		const { param1, param2 } = args;
+		return executeFunction(newFeature, [param1, param2], options);
+	}
 };
 ```
 
@@ -177,8 +177,8 @@ export default {
 ```javascript
 // In mcp-server/src/tools/utils.js
 const commandMap = {
-  // ... existing mappings
-  'new-feature': 'newFeature'
+	// ... existing mappings
+	'new-feature': 'newFeature'
 };
 ```
 
@@ -186,53 +186,53 @@ const commandMap = {
 
 ```javascript
 // In mcp-server/src/tools/newFeature.js
-import { z } from "zod";
+import { z } from 'zod';
 import {
-  executeTaskMasterCommand,
-  createContentResponse,
-  createErrorResponse,
-} from "./utils.js";
+	executeTaskMasterCommand,
+	createContentResponse,
+	createErrorResponse
+} from './utils.js';
 
 export function registerNewFeatureTool(server) {
-  server.addTool({
-    name: "newFeature",
-    description: "Run the new feature",
-    parameters: z.object({
-      param1: z.string().describe("First parameter"),
-      param2: z.number().optional().describe("Second parameter"),
-      file: z.string().optional().describe("Path to the tasks file"),
-      projectRoot: z.string().describe("Root directory of the project")
-    }),
-    execute: async (args, { log }) => {
-      try {
-        log.info(`Running new feature with args: ${JSON.stringify(args)}`);
+	server.addTool({
+		name: 'newFeature',
+		description: 'Run the new feature',
+		parameters: z.object({
+			param1: z.string().describe('First parameter'),
+			param2: z.number().optional().describe('Second parameter'),
+			file: z.string().optional().describe('Path to the tasks file'),
+			projectRoot: z.string().describe('Root directory of the project')
+		}),
+		execute: async (args, { log }) => {
+			try {
+				log.info(`Running new feature with args: ${JSON.stringify(args)}`);
 
-        const cmdArgs = [];
-        if (args.param1) cmdArgs.push(`--param1=${args.param1}`);
-        if (args.param2) cmdArgs.push(`--param2=${args.param2}`);
-        if (args.file) cmdArgs.push(`--file=${args.file}`);
+				const cmdArgs = [];
+				if (args.param1) cmdArgs.push(`--param1=${args.param1}`);
+				if (args.param2) cmdArgs.push(`--param2=${args.param2}`);
+				if (args.file) cmdArgs.push(`--file=${args.file}`);
 
-        const projectRoot = args.projectRoot;
+				const projectRoot = args.projectRoot;
 
-        // Execute the command
-        const result = await executeTaskMasterCommand(
-          "new-feature",
-          log,
-          cmdArgs,
-          projectRoot
-        );
+				// Execute the command
+				const result = await executeTaskMasterCommand(
+					'new-feature',
+					log,
+					cmdArgs,
+					projectRoot
+				);
 
-        if (!result.success) {
-          throw new Error(result.error);
-        }
+				if (!result.success) {
+					throw new Error(result.error);
+				}
 
-        return createContentResponse(result.stdout);
-      } catch (error) {
-        log.error(`Error in new feature: ${error.message}`);
-        return createErrorResponse(`Error in new feature: ${error.message}`);
-      }
-    },
-  });
+				return createContentResponse(result.stdout);
+			} catch (error) {
+				log.error(`Error in new feature: ${error.message}`);
+				return createErrorResponse(`Error in new feature: ${error.message}`);
+			}
+		}
+	});
 }
 ```
 
@@ -240,11 +240,11 @@ export function registerNewFeatureTool(server) {
 
 ```javascript
 // In mcp-server/src/tools/index.js
-import { registerNewFeatureTool } from "./newFeature.js";
+import { registerNewFeatureTool } from './newFeature.js';
 
 export function registerTaskMasterTools(server) {
-  // ... existing registrations
-  registerNewFeatureTool(server);
+	// ... existing registrations
+	registerNewFeatureTool(server);
 }
 ```
 

docs/README.md

@@ -0,0 +1,22 @@
+# Task Master Documentation
+
+Welcome to the Task Master documentation. Use the links below to navigate to the information you need:
+
+## Getting Started
+
+- [Configuration Guide](configuration.md) - Set up environment variables and customize Task Master
+- [Tutorial](tutorial.md) - Step-by-step guide to getting started with Task Master
+
+## Reference
+
+- [Command Reference](command-reference.md) - Complete list of all available commands
+- [Task Structure](task-structure.md) - Understanding the task format and features
+
+## Examples & Licensing
+
+- [Example Interactions](examples.md) - Common Cursor AI interaction examples
+- [Licensing Information](licensing.md) - Detailed information about the license
+
+## Need More Help?
+
+If you can't find what you're looking for in these docs, please check the [main README](../README.md) or visit our [GitHub repository](https://github.com/eyaltoledano/claude-task-master).

docs/ai-client-utils-example.md

@@ -7,56 +7,54 @@ This document provides examples of how to use the new AI client utilities with A
 ```javascript
 // In your direct function implementation:
 import {
-  getAnthropicClientForMCP, 
-  getModelConfig, 
-  handleClaudeError 
+	getAnthropicClientForMCP,
+	getModelConfig,
+	handleClaudeError
 } from '../utils/ai-client-utils.js';
 
 export async function someAiOperationDirect(args, log, context) {
-  try {
-    // Initialize Anthropic client with session from context
-    const client = getAnthropicClientForMCP(context.session, log);
+	try {
+		// Initialize Anthropic client with session from context
+		const client = getAnthropicClientForMCP(context.session, log);
 
-    // Get model configuration with defaults or session overrides
-    const modelConfig = getModelConfig(context.session);
+		// Get model configuration with defaults or session overrides
+		const modelConfig = getModelConfig(context.session);
 
-    // Make API call with proper error handling
-    try {
-      const response = await client.messages.create({
-        model: modelConfig.model,
-        max_tokens: modelConfig.maxTokens,
-        temperature: modelConfig.temperature,
-        messages: [
-          { role: 'user', content: 'Your prompt here' }
-        ]
-      });
+		// Make API call with proper error handling
+		try {
+			const response = await client.messages.create({
+				model: modelConfig.model,
+				max_tokens: modelConfig.maxTokens,
+				temperature: modelConfig.temperature,
+				messages: [{ role: 'user', content: 'Your prompt here' }]
+			});
 
-      return {
-        success: true,
-        data: response
-      };
-    } catch (apiError) {
-      // Use helper to get user-friendly error message
-      const friendlyMessage = handleClaudeError(apiError);
+			return {
+				success: true,
+				data: response
+			};
+		} catch (apiError) {
+			// Use helper to get user-friendly error message
+			const friendlyMessage = handleClaudeError(apiError);
 
-      return {
-        success: false,
-        error: {
-          code: 'AI_API_ERROR',
-          message: friendlyMessage
-        }
-      };
-    }
-  } catch (error) {
-    // Handle client initialization errors
-    return {
-      success: false,
-      error: {
-        code: 'AI_CLIENT_ERROR',
-        message: error.message
-      }
-    };
-  }
+			return {
+				success: false,
+				error: {
+					code: 'AI_API_ERROR',
+					message: friendlyMessage
+				}
+			};
+		}
+	} catch (error) {
+		// Handle client initialization errors
+		return {
+			success: false,
+			error: {
+				code: 'AI_CLIENT_ERROR',
+				message: error.message
+			}
+		};
+	}
 }
 ```
 
@@ -64,86 +62,85 @@ export async function someAiOperationDirect(args, log, context) {
 
 ```javascript
 // In your MCP tool implementation:
-import { AsyncOperationManager, StatusCodes } from '../../utils/async-operation-manager.js';
+import {
+	AsyncOperationManager,
+	StatusCodes
+} from '../../utils/async-operation-manager.js';
 import { someAiOperationDirect } from '../../core/direct-functions/some-ai-operation.js';
 
 export async function someAiOperation(args, context) {
-  const { session, mcpLog } = context;
-  const log = mcpLog || console;
+	const { session, mcpLog } = context;
+	const log = mcpLog || console;
 
-  try {
-    // Create operation description
-    const operationDescription = `AI operation: ${args.someParam}`;
+	try {
+		// Create operation description
+		const operationDescription = `AI operation: ${args.someParam}`;
 
-    // Start async operation
-    const operation = AsyncOperationManager.createOperation(
-      operationDescription,
-      async (reportProgress) => {
-        try {
-          // Initial progress report
-          reportProgress({
-            progress: 0,
-            status: 'Starting AI operation...'
-          });
+		// Start async operation
+		const operation = AsyncOperationManager.createOperation(
+			operationDescription,
+			async (reportProgress) => {
+				try {
+					// Initial progress report
+					reportProgress({
+						progress: 0,
+						status: 'Starting AI operation...'
+					});
 
-          // Call direct function with session and progress reporting
-          const result = await someAiOperationDirect(
-            args, 
-            log, 
-            {
-              reportProgress,
-              mcpLog: log,
-              session
-            }
-          );
+					// Call direct function with session and progress reporting
+					const result = await someAiOperationDirect(args, log, {
+						reportProgress,
+						mcpLog: log,
+						session
+					});
 
-          // Final progress update
-          reportProgress({
-            progress: 100,
-            status: result.success ? 'Operation completed' : 'Operation failed',
-            result: result.data,
-            error: result.error
-          });
+					// Final progress update
+					reportProgress({
+						progress: 100,
+						status: result.success ? 'Operation completed' : 'Operation failed',
+						result: result.data,
+						error: result.error
+					});
 
-          return result;
-        } catch (error) {
-          // Handle errors in the operation
-          reportProgress({
-            progress: 100,
-            status: 'Operation failed',
-            error: {
-              message: error.message,
-              code: error.code || 'OPERATION_FAILED'
-            }
-          });
-          throw error;
-        }
-      }
-    );
+					return result;
+				} catch (error) {
+					// Handle errors in the operation
+					reportProgress({
+						progress: 100,
+						status: 'Operation failed',
+						error: {
+							message: error.message,
+							code: error.code || 'OPERATION_FAILED'
+						}
+					});
+					throw error;
+				}
+			}
+		);
 
-    // Return immediate response with operation ID
-    return {
-      status: StatusCodes.ACCEPTED,
-      body: {
-        success: true,
-        message: 'Operation started',
-        operationId: operation.id
-      }
-    };
-  } catch (error) {
-    // Handle errors in the MCP tool
-    log.error(`Error in someAiOperation: ${error.message}`);
-    return {
-      status: StatusCodes.INTERNAL_SERVER_ERROR,
-      body: {
-        success: false,
-        error: {
-          code: 'OPERATION_FAILED',
-          message: error.message
-        }
-      }
-    };
-  }
+		// Return immediate response with operation ID
+		return {
+			status: StatusCodes.ACCEPTED,
+			body: {
+				success: true,
+				message: 'Operation started',
+				operationId: operation.id
+			}
+		};
+	} catch (error) {
+		// Handle errors in the MCP tool
+		log.error(`Error in someAiOperation: ${error.message}`);
+		return {
+			status: StatusCodes.INTERNAL_SERVER_ERROR,
+			body: {
+				success: false,
+				error: {
+					code: 'OPERATION_FAILED',
+					message: error.message
+				}
+			}
+		};
+	}
 }
 ```
 
@@ -152,57 +149,55 @@ export async function someAiOperation(args, context) {
 ```javascript
 // In your direct function:
 import {
-  getPerplexityClientForMCP, 
-  getBestAvailableAIModel 
+	getPerplexityClientForMCP,
+	getBestAvailableAIModel
 } from '../utils/ai-client-utils.js';
 
 export async function researchOperationDirect(args, log, context) {
-  try {
-    // Get the best AI model for this operation based on needs
-    const { type, client } = await getBestAvailableAIModel(
-      context.session, 
-      { requiresResearch: true },
-      log
-    );
+	try {
+		// Get the best AI model for this operation based on needs
+		const { type, client } = await getBestAvailableAIModel(
+			context.session,
+			{ requiresResearch: true },
+			log
+		);
 
-    // Report which model we're using
-    if (context.reportProgress) {
-      await context.reportProgress({
-        progress: 10,
-        status: `Using ${type} model for research...`
-      });
-    }
+		// Report which model we're using
+		if (context.reportProgress) {
+			await context.reportProgress({
+				progress: 10,
+				status: `Using ${type} model for research...`
+			});
+		}
 
-    // Make API call based on the model type
-    if (type === 'perplexity') {
-      // Call Perplexity
-      const response = await client.chat.completions.create({
-        model: context.session?.env?.PERPLEXITY_MODEL || 'sonar-medium-online',
-        messages: [
-          { role: 'user', content: args.researchQuery }
-        ],
-        temperature: 0.1
-      });
+		// Make API call based on the model type
+		if (type === 'perplexity') {
+			// Call Perplexity
+			const response = await client.chat.completions.create({
+				model: context.session?.env?.PERPLEXITY_MODEL || 'sonar-medium-online',
+				messages: [{ role: 'user', content: args.researchQuery }],
+				temperature: 0.1
+			});
 
-      return {
-        success: true,
-        data: response.choices[0].message.content
-      };
-    } else {
-      // Call Claude as fallback
-      // (Implementation depends on specific needs)
-      // ...
-    }
-  } catch (error) {
-    // Handle errors
-    return {
-      success: false,
-      error: {
-        code: 'RESEARCH_ERROR',
-        message: error.message
-      }
-    };
-  }
+			return {
+				success: true,
+				data: response.choices[0].message.content
+			};
+		} else {
+			// Call Claude as fallback
+			// (Implementation depends on specific needs)
+			// ...
+		}
+	} catch (error) {
+		// Handle errors
+		return {
+			success: false,
+			error: {
+				code: 'RESEARCH_ERROR',
+				message: error.message
+			}
+		};
+	}
 }
 ```
 
@@ -214,9 +209,9 @@ import { getModelConfig } from '../utils/ai-client-utils.js';
 
 // Using custom defaults for a specific operation
 const operationDefaults = {
-  model: 'claude-3-haiku-20240307',  // Faster, smaller model
-  maxTokens: 1000,                  // Lower token limit
-  temperature: 0.2                  // Lower temperature for more deterministic output
+	model: 'claude-3-haiku-20240307', // Faster, smaller model
+	maxTokens: 1000, // Lower token limit
+	temperature: 0.2 // Lower temperature for more deterministic output
 };
 
 // Get model config with operation-specific defaults
@@ -224,30 +219,34 @@ const modelConfig = getModelConfig(context.session, operationDefaults);
 
 // Now use modelConfig in your API calls
 const response = await client.messages.create({
-  model: modelConfig.model,
-  max_tokens: modelConfig.maxTokens,
-  temperature: modelConfig.temperature,
-  // Other parameters...
+	model: modelConfig.model,
+	max_tokens: modelConfig.maxTokens,
+	temperature: modelConfig.temperature
+	// Other parameters...
 });
 ```
 
 ## Best Practices
 
 1. **Error Handling**:
+
    - Always use try/catch blocks around both client initialization and API calls
    - Use `handleClaudeError` to provide user-friendly error messages
    - Return standardized error objects with code and message
 
 2. **Progress Reporting**:
+
    - Report progress at key points (starting, processing, completing)
    - Include meaningful status messages
    - Include error details in progress reports when failures occur
 
 3. **Session Handling**:
+
    - Always pass the session from the context to the AI client getters
    - Use `getModelConfig` to respect user settings from session
 
 4. **Model Selection**:
+
    - Use `getBestAvailableAIModel` when you need to select between different models
    - Set `requiresResearch: true` when you need Perplexity capabilities
 

docs/command-reference.md

@@ -0,0 +1,205 @@
+# Task Master Command Reference
+
+Here's a comprehensive reference of all available commands:
+
+## Parse PRD
+
+```bash
+# Parse a PRD file and generate tasks
+task-master parse-prd <prd-file.txt>
+
+# Limit the number of tasks generated
+task-master parse-prd <prd-file.txt> --num-tasks=10
+```
+
+## List Tasks
+
+```bash
+# List all tasks
+task-master list
+
+# List tasks with a specific status
+task-master list --status=<status>
+
+# List tasks with subtasks
+task-master list --with-subtasks
+
+# List tasks with a specific status and include subtasks
+task-master list --status=<status> --with-subtasks
+```
+
+## Show Next Task
+
+```bash
+# Show the next task to work on based on dependencies and status
+task-master next
+```
+
+## Show Specific Task
+
+```bash
+# Show details of a specific task
+task-master show <id>
+# or
+task-master show --id=<id>
+
+# View a specific subtask (e.g., subtask 2 of task 1)
+task-master show 1.2
+```
+
+## Update Tasks
+
+```bash
+# Update tasks from a specific ID and provide context
+task-master update --from=<id> --prompt="<prompt>"
+```
+
+## Update a Specific Task
+
+```bash
+# Update a single task by ID with new information
+task-master update-task --id=<id> --prompt="<prompt>"
+
+# Use research-backed updates with Perplexity AI
+task-master update-task --id=<id> --prompt="<prompt>" --research
+```
+
+## Update a Subtask
+
+```bash
+# Append additional information to a specific subtask
+task-master update-subtask --id=<parentId.subtaskId> --prompt="<prompt>"
+
+# Example: Add details about API rate limiting to subtask 2 of task 5
+task-master update-subtask --id=5.2 --prompt="Add rate limiting of 100 requests per minute"
+
+# Use research-backed updates with Perplexity AI
+task-master update-subtask --id=<parentId.subtaskId> --prompt="<prompt>" --research
+```
+
+Unlike the `update-task` command which replaces task information, the `update-subtask` command _appends_ new information to the existing subtask details, marking it with a timestamp. This is useful for iteratively enhancing subtasks while preserving the original content.
+
+## Generate Task Files
+
+```bash
+# Generate individual task files from tasks.json
+task-master generate
+```
+
+## Set Task Status
+
+```bash
+# Set status of a single task
+task-master set-status --id=<id> --status=<status>
+
+# Set status for multiple tasks
+task-master set-status --id=1,2,3 --status=<status>
+
+# Set status for subtasks
+task-master set-status --id=1.1,1.2 --status=<status>
+```
+
+When marking a task as "done", all of its subtasks will automatically be marked as "done" as well.
+
+## Expand Tasks
+
+```bash
+# Expand a specific task with subtasks
+task-master expand --id=<id> --num=<number>
+
+# Expand with additional context
+task-master expand --id=<id> --prompt="<context>"
+
+# Expand all pending tasks
+task-master expand --all
+
+# Force regeneration of subtasks for tasks that already have them
+task-master expand --all --force
+
+# Research-backed subtask generation for a specific task
+task-master expand --id=<id> --research
+
+# Research-backed generation for all tasks
+task-master expand --all --research
+```
+
+## Clear Subtasks
+
+```bash
+# Clear subtasks from a specific task
+task-master clear-subtasks --id=<id>
+
+# Clear subtasks from multiple tasks
+task-master clear-subtasks --id=1,2,3
+
+# Clear subtasks from all tasks
+task-master clear-subtasks --all
+```
+
+## Analyze Task Complexity
+
+```bash
+# Analyze complexity of all tasks
+task-master analyze-complexity
+
+# Save report to a custom location
+task-master analyze-complexity --output=my-report.json
+
+# Use a specific LLM model
+task-master analyze-complexity --model=claude-3-opus-20240229
+
+# Set a custom complexity threshold (1-10)
+task-master analyze-complexity --threshold=6
+
+# Use an alternative tasks file
+task-master analyze-complexity --file=custom-tasks.json
+
+# Use Perplexity AI for research-backed complexity analysis
+task-master analyze-complexity --research
+```
+
+## View Complexity Report
+
+```bash
+# Display the task complexity analysis report
+task-master complexity-report
+
+# View a report at a custom location
+task-master complexity-report --file=my-report.json
+```
+
+## Managing Task Dependencies
+
+```bash
+# Add a dependency to a task
+task-master add-dependency --id=<id> --depends-on=<id>
+
+# Remove a dependency from a task
+task-master remove-dependency --id=<id> --depends-on=<id>
+
+# Validate dependencies without fixing them
+task-master validate-dependencies
+
+# Find and fix invalid dependencies automatically
+task-master fix-dependencies
+```
+
+## Add a New Task
+
+```bash
+# Add a new task using AI
+task-master add-task --prompt="Description of the new task"
+
+# Add a task with dependencies
+task-master add-task --prompt="Description" --dependencies=1,2,3
+
+# Add a task with priority
+task-master add-task --prompt="Description" --priority=high
+```
+
+## Initialize a Project
+
+```bash
+# Initialize a new project with Task Master structure
+task-master init
+```

docs/configuration.md

@@ -0,0 +1,65 @@
+# Configuration
+
+Task Master can be configured through environment variables in a `.env` file at the root of your project.
+
+## Required Configuration
+
+- `ANTHROPIC_API_KEY`: Your Anthropic API key for Claude (Example: `ANTHROPIC_API_KEY=sk-ant-api03-...`)
+
+## Optional Configuration
+
+- `MODEL` (Default: `"claude-3-7-sonnet-20250219"`): Claude model to use (Example: `MODEL=claude-3-opus-20240229`)
+- `MAX_TOKENS` (Default: `"4000"`): Maximum tokens for responses (Example: `MAX_TOKENS=8000`)
+- `TEMPERATURE` (Default: `"0.7"`): Temperature for model responses (Example: `TEMPERATURE=0.5`)
+- `DEBUG` (Default: `"false"`): Enable debug logging (Example: `DEBUG=true`)
+- `LOG_LEVEL` (Default: `"info"`): Console output level (Example: `LOG_LEVEL=debug`)
+- `DEFAULT_SUBTASKS` (Default: `"3"`): Default subtask count (Example: `DEFAULT_SUBTASKS=5`)
+- `DEFAULT_PRIORITY` (Default: `"medium"`): Default priority (Example: `DEFAULT_PRIORITY=high`)
+- `PROJECT_NAME` (Default: `"MCP SaaS MVP"`): Project name in metadata (Example: `PROJECT_NAME=My Awesome Project`)
+- `PROJECT_VERSION` (Default: `"1.0.0"`): Version in metadata (Example: `PROJECT_VERSION=2.1.0`)
+- `PERPLEXITY_API_KEY`: For research-backed features (Example: `PERPLEXITY_API_KEY=pplx-...`)
+- `PERPLEXITY_MODEL` (Default: `"sonar-medium-online"`): Perplexity model (Example: `PERPLEXITY_MODEL=sonar-large-online`)
+
+## Example .env File
+
+```
+# Required
+ANTHROPIC_API_KEY=sk-ant-api03-your-api-key
+
+# Optional - Claude Configuration
+MODEL=claude-3-7-sonnet-20250219
+MAX_TOKENS=4000
+TEMPERATURE=0.7
+
+# Optional - Perplexity API for Research
+PERPLEXITY_API_KEY=pplx-your-api-key
+PERPLEXITY_MODEL=sonar-medium-online
+
+# Optional - Project Info
+PROJECT_NAME=My Project
+PROJECT_VERSION=1.0.0
+
+# Optional - Application Configuration
+DEFAULT_SUBTASKS=3
+DEFAULT_PRIORITY=medium
+DEBUG=false
+LOG_LEVEL=info
+```
+
+## Troubleshooting
+
+### If `task-master init` doesn't respond:
+
+Try running it with Node directly:
+
+```bash
+node node_modules/claude-task-master/scripts/init.js
+```
+
+Or clone the repository and run:
+
+```bash
+git clone https://github.com/eyaltoledano/claude-task-master.git
+cd claude-task-master
+node scripts/init.js
+```

docs/examples.md

@@ -0,0 +1,53 @@
+# Example Cursor AI Interactions
+
+Here are some common interactions with Cursor AI when using Task Master:
+
+## Starting a new project
+
+```
+I've just initialized a new project with Claude Task Master. I have a PRD at scripts/prd.txt.
+Can you help me parse it and set up the initial tasks?
+```
+
+## Working on tasks
+
+```
+What's the next task I should work on? Please consider dependencies and priorities.
+```
+
+## Implementing a specific task
+
+```
+I'd like to implement task 4. Can you help me understand what needs to be done and how to approach it?
+```
+
+## Managing subtasks
+
+```
+I need to regenerate the subtasks for task 3 with a different approach. Can you help me clear and regenerate them?
+```
+
+## Handling changes
+
+```
+We've decided to use MongoDB instead of PostgreSQL. Can you update all future tasks to reflect this change?
+```
+
+## Completing work
+
+```
+I've finished implementing the authentication system described in task 2. All tests are passing.
+Please mark it as complete and tell me what I should work on next.
+```
+
+## Analyzing complexity
+
+```
+Can you analyze the complexity of our tasks to help me understand which ones need to be broken down further?
+```
+
+## Viewing complexity report
+
+```
+Can you show me the complexity report in a more readable format?
+```

docs/licensing.md

@@ -0,0 +1,18 @@
+# Licensing
+
+Task Master is licensed under the MIT License with Commons Clause. This means you can:
+
+## ✅ Allowed:
+
+- Use Task Master for any purpose (personal, commercial, academic)
+- Modify the code
+- Distribute copies
+- Create and sell products built using Task Master
+
+## ❌ Not Allowed:
+
+- Sell Task Master itself
+- Offer Task Master as a hosted service
+- Create competing products based on Task Master
+
+See the [LICENSE](../LICENSE) file for the complete license text.

docs/task-structure.md

@@ -0,0 +1,139 @@
+# Task Structure
+
+Tasks in Task Master follow a specific format designed to provide comprehensive information for both humans and AI assistants.
+
+## Task Fields in tasks.json
+
+Tasks in tasks.json have the following structure:
+
+- `id`: Unique identifier for the task (Example: `1`)
+- `title`: Brief, descriptive title of the task (Example: `"Initialize Repo"`)
+- `description`: Concise description of what the task involves (Example: `"Create a new repository, set up initial structure."`)
+- `status`: Current state of the task (Example: `"pending"`, `"done"`, `"deferred"`)
+- `dependencies`: IDs of tasks that must be completed before this task (Example: `[1, 2]`)
+  - Dependencies are displayed with status indicators (✅ for completed, ⏱️ for pending)
+  - This helps quickly identify which prerequisite tasks are blocking work
+- `priority`: Importance level of the task (Example: `"high"`, `"medium"`, `"low"`)
+- `details`: In-depth implementation instructions (Example: `"Use GitHub client ID/secret, handle callback, set session token."`)
+- `testStrategy`: Verification approach (Example: `"Deploy and call endpoint to confirm 'Hello World' response."`)
+- `subtasks`: List of smaller, more specific tasks that make up the main task (Example: `[{"id": 1, "title": "Configure OAuth", ...}]`)
+
+## Task File Format
+
+Individual task files follow this format:
+
+```
+# Task ID: <id>
+# Title: <title>
+# Status: <status>
+# Dependencies: <comma-separated list of dependency IDs>
+# Priority: <priority>
+# Description: <brief description>
+# Details:
+<detailed implementation notes>
+
+# Test Strategy:
+<verification approach>
+```
+
+## Features in Detail
+
+### Analyzing Task Complexity
+
+The `analyze-complexity` command:
+
+- Analyzes each task using AI to assess its complexity on a scale of 1-10
+- Recommends optimal number of subtasks based on configured DEFAULT_SUBTASKS
+- Generates tailored prompts for expanding each task
+- Creates a comprehensive JSON report with ready-to-use commands
+- Saves the report to scripts/task-complexity-report.json by default
+
+The generated report contains:
+
+- Complexity analysis for each task (scored 1-10)
+- Recommended number of subtasks based on complexity
+- AI-generated expansion prompts customized for each task
+- Ready-to-run expansion commands directly within each task analysis
+
+### Viewing Complexity Report
+
+The `complexity-report` command:
+
+- Displays a formatted, easy-to-read version of the complexity analysis report
+- Shows tasks organized by complexity score (highest to lowest)
+- Provides complexity distribution statistics (low, medium, high)
+- Highlights tasks recommended for expansion based on threshold score
+- Includes ready-to-use expansion commands for each complex task
+- If no report exists, offers to generate one on the spot
+
+### Smart Task Expansion
+
+The `expand` command automatically checks for and uses the complexity report:
+
+When a complexity report exists:
+
+- Tasks are automatically expanded using the recommended subtask count and prompts
+- When expanding all tasks, they're processed in order of complexity (highest first)
+- Research-backed generation is preserved from the complexity analysis
+- You can still override recommendations with explicit command-line options
+
+Example workflow:
+
+```bash
+# Generate the complexity analysis report with research capabilities
+task-master analyze-complexity --research
+
+# Review the report in a readable format
+task-master complexity-report
+
+# Expand tasks using the optimized recommendations
+task-master expand --id=8
+# or expand all tasks
+task-master expand --all
+```
+
+### Finding the Next Task
+
+The `next` command:
+
+- Identifies tasks that are pending/in-progress and have all dependencies satisfied
+- Prioritizes tasks by priority level, dependency count, and task ID
+- Displays comprehensive information about the selected task:
+  - Basic task details (ID, title, priority, dependencies)
+  - Implementation details
+  - Subtasks (if they exist)
+- Provides contextual suggested actions:
+  - Command to mark the task as in-progress
+  - Command to mark the task as done
+  - Commands for working with subtasks
+
+### Viewing Specific Task Details
+
+The `show` command:
+
+- Displays comprehensive details about a specific task or subtask
+- Shows task status, priority, dependencies, and detailed implementation notes
+- For parent tasks, displays all subtasks and their status
+- For subtasks, shows parent task relationship
+- Provides contextual action suggestions based on the task's state
+- Works with both regular tasks and subtasks (using the format taskId.subtaskId)
+
+## Best Practices for AI-Driven Development
+
+1. **Start with a detailed PRD**: The more detailed your PRD, the better the generated tasks will be.
+
+2. **Review generated tasks**: After parsing the PRD, review the tasks to ensure they make sense and have appropriate dependencies.
+
+3. **Analyze task complexity**: Use the complexity analysis feature to identify which tasks should be broken down further.
+
+4. **Follow the dependency chain**: Always respect task dependencies - the Cursor agent will help with this.
+
+5. **Update as you go**: If your implementation diverges from the plan, use the update command to keep future tasks aligned with your current approach.
+
+6. **Break down complex tasks**: Use the expand command to break down complex tasks into manageable subtasks.
+
+7. **Regenerate task files**: After any updates to tasks.json, regenerate the task files to keep them in sync.
+
+8. **Communicate context to the agent**: When asking the Cursor agent to help with a task, provide context about what you're trying to achieve.
+
+9. **Validate dependencies**: Periodically run the validate-dependencies command to check for invalid or circular dependencies.

docs/tutorial.md

@@ -0,0 +1,355 @@
+# Task Master Tutorial
+
+This tutorial will guide you through setting up and using Task Master for AI-driven development.
+
+## Initial Setup
+
+There are two ways to set up Task Master: using MCP (recommended) or via npm installation.
+
+### Option 1: Using MCP (Recommended)
+
+MCP (Model Control Protocol) provides the easiest way to get started with Task Master directly in your editor.
+
+1. **Add the MCP config to your editor** (Cursor recommended, but it works with other text editors):
+
+```json
+{
+	"mcpServers": {
+		"taskmaster-ai": {
+			"command": "npx",
+			"args": ["-y", "task-master-mcp"],
+			"env": {
+				"ANTHROPIC_API_KEY": "YOUR_ANTHROPIC_API_KEY_HERE",
+				"PERPLEXITY_API_KEY": "YOUR_PERPLEXITY_API_KEY_HERE",
+				"MODEL": "claude-3-7-sonnet-20250219",
+				"PERPLEXITY_MODEL": "sonar-pro",
+				"MAX_TOKENS": 64000,
+				"TEMPERATURE": 0.2,
+				"DEFAULT_SUBTASKS": 5,
+				"DEFAULT_PRIORITY": "medium"
+			}
+		}
+	}
+}
+```
+
+2. **Enable the MCP** in your editor settings
+
+3. **Prompt the AI** to initialize Task Master:
+
+```
+Can you please initialize taskmaster-ai into my project?
+```
+
+The AI will:
+
+- Create necessary project structure
+- Set up initial configuration files
+- Guide you through the rest of the process
+
+4. Place your PRD document in the `scripts/` directory (e.g., `scripts/prd.txt`)
+
+5. **Use natural language commands** to interact with Task Master:
+
+```
+Can you parse my PRD at scripts/prd.txt?
+What's the next task I should work on?
+Can you help me implement task 3?
+```
+
+### Option 2: Manual Installation
+
+If you prefer to use the command line interface directly:
+
+```bash
+# Install globally
+npm install -g task-master-ai
+
+# OR install locally within your project
+npm install task-master-ai
+```
+
+Initialize a new project:
+
+```bash
+# If installed globally
+task-master init
+
+# If installed locally
+npx task-master-init
+```
+
+This will prompt you for project details and set up a new project with the necessary files and structure.
+
+## Common Commands
+
+After setting up Task Master, you can use these commands (either via AI prompts or CLI):
+
+```bash
+# Parse a PRD and generate tasks
+task-master parse-prd your-prd.txt
+
+# List all tasks
+task-master list
+
+# Show the next task to work on
+task-master next
+
+# Generate task files
+task-master generate
+```
+
+## Setting up Cursor AI Integration
+
+Task Master is designed to work seamlessly with [Cursor AI](https://www.cursor.so/), providing a structured workflow for AI-driven development.
+
+### Using Cursor with MCP (Recommended)
+
+If you've already set up Task Master with MCP in Cursor, the integration is automatic. You can simply use natural language to interact with Task Master:
+
+```
+What tasks are available to work on next?
+Can you analyze the complexity of our tasks?
+I'd like to implement task 4. What does it involve?
+```
+
+### Manual Cursor Setup
+
+If you're not using MCP, you can still set up Cursor integration:
+
+1. After initializing your project, open it in Cursor
+2. The `.cursor/rules/dev_workflow.mdc` file is automatically loaded by Cursor, providing the AI with knowledge about the task management system
+3. Place your PRD document in the `scripts/` directory (e.g., `scripts/prd.txt`)
+4. Open Cursor's AI chat and switch to Agent mode
+
+### Alternative MCP Setup in Cursor
+
+You can also set up the MCP server in Cursor settings:
+
+1. Go to Cursor settings
+2. Navigate to the MCP section
+3. Click on "Add New MCP Server"
+4. Configure with the following details:
+   - Name: "Task Master"
+   - Type: "Command"
+   - Command: "npx -y task-master-mcp"
+5. Save the settings
+
+Once configured, you can interact with Task Master's task management commands directly through Cursor's interface, providing a more integrated experience.
+
+## Initial Task Generation
+
+In Cursor's AI chat, instruct the agent to generate tasks from your PRD:
+
+```
+Please use the task-master parse-prd command to generate tasks from my PRD. The PRD is located at scripts/prd.txt.
+```
+
+The agent will execute:
+
+```bash
+task-master parse-prd scripts/prd.txt
+```
+
+This will:
+
+- Parse your PRD document
+- Generate a structured `tasks.json` file with tasks, dependencies, priorities, and test strategies
+- The agent will understand this process due to the Cursor rules
+
+### Generate Individual Task Files
+
+Next, ask the agent to generate individual task files:
+
+```
+Please generate individual task files from tasks.json
+```
+
+The agent will execute:
+
+```bash
+task-master generate
+```
+
+This creates individual task files in the `tasks/` directory (e.g., `task_001.txt`, `task_002.txt`), making it easier to reference specific tasks.
+
+## AI-Driven Development Workflow
+
+The Cursor agent is pre-configured (via the rules file) to follow this workflow:
+
+### 1. Task Discovery and Selection
+
+Ask the agent to list available tasks:
+
+```
+What tasks are available to work on next?
+```
+
+The agent will:
+
+- Run `task-master list` to see all tasks
+- Run `task-master next` to determine the next task to work on
+- Analyze dependencies to determine which tasks are ready to be worked on
+- Prioritize tasks based on priority level and ID order
+- Suggest the next task(s) to implement
+
+### 2. Task Implementation
+
+When implementing a task, the agent will:
+
+- Reference the task's details section for implementation specifics
+- Consider dependencies on previous tasks
+- Follow the project's coding standards
+- Create appropriate tests based on the task's testStrategy
+
+You can ask:
+
+```
+Let's implement task 3. What does it involve?
+```
+
+### 3. Task Verification
+
+Before marking a task as complete, verify it according to:
+
+- The task's specified testStrategy
+- Any automated tests in the codebase
+- Manual verification if required
+
+### 4. Task Completion
+
+When a task is completed, tell the agent:
+
+```
+Task 3 is now complete. Please update its status.
+```
+
+The agent will execute:
+
+```bash
+task-master set-status --id=3 --status=done
+```
+
+### 5. Handling Implementation Drift
+
+If during implementation, you discover that:
+
+- The current approach differs significantly from what was planned
+- Future tasks need to be modified due to current implementation choices
+- New dependencies or requirements have emerged
+
+Tell the agent:
+
+```
+We've changed our approach. We're now using Express instead of Fastify. Please update all future tasks to reflect this change.
+```
+
+The agent will execute:
+
+```bash
+task-master update --from=4 --prompt="Now we are using Express instead of Fastify."
+```
+
+This will rewrite or re-scope subsequent tasks in tasks.json while preserving completed work.
+
+### 6. Breaking Down Complex Tasks
+
+For complex tasks that need more granularity:
+
+```
+Task 5 seems complex. Can you break it down into subtasks?
+```
+
+The agent will execute:
+
+```bash
+task-master expand --id=5 --num=3
+```
+
+You can provide additional context:
+
+```
+Please break down task 5 with a focus on security considerations.
+```
+
+The agent will execute:
+
+```bash
+task-master expand --id=5 --prompt="Focus on security aspects"
+```
+
+You can also expand all pending tasks:
+
+```
+Please break down all pending tasks into subtasks.
+```
+
+The agent will execute:
+
+```bash
+task-master expand --all
+```
+
+For research-backed subtask generation using Perplexity AI:
+
+```
+Please break down task 5 using research-backed generation.
+```
+
+The agent will execute:
+
+```bash
+task-master expand --id=5 --research
+```
+
+## Example Cursor AI Interactions
+
+### Starting a new project
+
+```
+I've just initialized a new project with Claude Task Master. I have a PRD at scripts/prd.txt.
+Can you help me parse it and set up the initial tasks?
+```
+
+### Working on tasks
+
+```
+What's the next task I should work on? Please consider dependencies and priorities.
+```
+
+### Implementing a specific task
+
+```
+I'd like to implement task 4. Can you help me understand what needs to be done and how to approach it?
+```
+
+### Managing subtasks
+
+```
+I need to regenerate the subtasks for task 3 with a different approach. Can you help me clear and regenerate them?
+```
+
+### Handling changes
+
+```
+We've decided to use MongoDB instead of PostgreSQL. Can you update all future tasks to reflect this change?
+```
+
+### Completing work
+
+```
+I've finished implementing the authentication system described in task 2. All tests are passing.
+Please mark it as complete and tell me what I should work on next.
+```
+
+### Analyzing complexity
+
+```
+Can you analyze the complexity of our tasks to help me understand which ones need to be broken down further?
+```
+
+### Viewing complexity report
+
+```
+Can you show me the complexity report in a more readable format?
+```

entries.json

@@ -1,41 +0,0 @@
-import os
-import json
-
-# Path to Cursor's history folder
-history_path = os.path.expanduser('~/Library/Application Support/Cursor/User/History')
-
-# File to search for
-target_file = 'tasks/tasks.json'
-
-# Function to search through all entries.json files
-def search_entries_for_file(history_path, target_file):
-    matching_folders = []
-    for folder in os.listdir(history_path):
-        folder_path = os.path.join(history_path, folder)
-        if not os.path.isdir(folder_path):
-            continue
-
-        # Look for entries.json
-        entries_file = os.path.join(folder_path, 'entries.json')
-        if not os.path.exists(entries_file):
-            continue
-
-        # Parse entries.json to find the resource key
-        with open(entries_file, 'r') as f:
-            data = json.load(f)
-            resource = data.get('resource', None)
-            if resource and target_file in resource:
-                matching_folders.append(folder_path)
-
-    return matching_folders
-
-# Search for the target file
-matching_folders = search_entries_for_file(history_path, target_file)
-
-# Output the matching folders
-if matching_folders:
-    print(f"Found {target_file} in the following folders:")
-    for folder in matching_folders:
-        print(folder)
-else:
-    print(f"No matches found for {target_file}.")

index.js

@@ -41,27 +41,27 @@ export const devScriptPath = resolve(__dirname, './scripts/dev.js');
 
 // Export a function to initialize a new project programmatically
 export const initProject = async (options = {}) => {
-  const init = await import('./scripts/init.js');
-  return init.initializeProject(options);
+	const init = await import('./scripts/init.js');
+	return init.initializeProject(options);
 };
 
 // Export a function to run init as a CLI command
 export const runInitCLI = async () => {
-  // Using spawn to ensure proper handling of stdio and process exit
-  const child = spawn('node', [resolve(__dirname, './scripts/init.js')], {
-    stdio: 'inherit',
-    cwd: process.cwd()
-  });
+	// Using spawn to ensure proper handling of stdio and process exit
+	const child = spawn('node', [resolve(__dirname, './scripts/init.js')], {
+		stdio: 'inherit',
+		cwd: process.cwd()
+	});
 
-  return new Promise((resolve, reject) => {
-    child.on('close', (code) => {
-      if (code === 0) {
-        resolve();
-      } else {
-        reject(new Error(`Init script exited with code ${code}`));
-      }
-    });
-  });
+	return new Promise((resolve, reject) => {
+		child.on('close', (code) => {
+			if (code === 0) {
+				resolve();
+			} else {
+				reject(new Error(`Init script exited with code ${code}`));
+			}
+		});
+	});
 };
 
 // Export version information
@@ -69,81 +69,81 @@ export const version = packageJson.version;
 
 // CLI implementation
 if (import.meta.url === `file://${process.argv[1]}`) {
-  const program = new Command();
+	const program = new Command();
 
-  program
-    .name('task-master')
-    .description('Claude Task Master CLI')
-    .version(version);
+	program
+		.name('task-master')
+		.description('Claude Task Master CLI')
+		.version(version);
 
-  program
-    .command('init')
-    .description('Initialize a new project')
-    .action(() => {
-      runInitCLI().catch(err => {
-        console.error('Init failed:', err.message);
-        process.exit(1);
-      });
-    });
+	program
+		.command('init')
+		.description('Initialize a new project')
+		.action(() => {
+			runInitCLI().catch((err) => {
+				console.error('Init failed:', err.message);
+				process.exit(1);
+			});
+		});
 
-  program
-    .command('dev')
-    .description('Run the dev.js script')
-    .allowUnknownOption(true)
-    .action(() => {
-      const args = process.argv.slice(process.argv.indexOf('dev') + 1);
-      const child = spawn('node', [devScriptPath, ...args], {
-        stdio: 'inherit',
-        cwd: process.cwd()
-      });
+	program
+		.command('dev')
+		.description('Run the dev.js script')
+		.allowUnknownOption(true)
+		.action(() => {
+			const args = process.argv.slice(process.argv.indexOf('dev') + 1);
+			const child = spawn('node', [devScriptPath, ...args], {
+				stdio: 'inherit',
+				cwd: process.cwd()
+			});
 
-      child.on('close', (code) => {
-        process.exit(code);
-      });
-    });
+			child.on('close', (code) => {
+				process.exit(code);
+			});
+		});
 
-  // Add shortcuts for common dev.js commands
-  program
-    .command('list')
-    .description('List all tasks')
-    .action(() => {
-      const child = spawn('node', [devScriptPath, 'list'], {
-        stdio: 'inherit',
-        cwd: process.cwd()
-      });
+	// Add shortcuts for common dev.js commands
+	program
+		.command('list')
+		.description('List all tasks')
+		.action(() => {
+			const child = spawn('node', [devScriptPath, 'list'], {
+				stdio: 'inherit',
+				cwd: process.cwd()
+			});
 
-      child.on('close', (code) => {
-        process.exit(code);
-      });
-    });
+			child.on('close', (code) => {
+				process.exit(code);
+			});
+		});
 
-  program
-    .command('next')
-    .description('Show the next task to work on')
-    .action(() => {
-      const child = spawn('node', [devScriptPath, 'next'], {
-        stdio: 'inherit',
-        cwd: process.cwd()
-      });
+	program
+		.command('next')
+		.description('Show the next task to work on')
+		.action(() => {
+			const child = spawn('node', [devScriptPath, 'next'], {
+				stdio: 'inherit',
+				cwd: process.cwd()
+			});
 
-      child.on('close', (code) => {
-        process.exit(code);
-      });
-    });
+			child.on('close', (code) => {
+				process.exit(code);
+			});
+		});
 
-  program
-    .command('generate')
-    .description('Generate task files')
-    .action(() => {
-      const child = spawn('node', [devScriptPath, 'generate'], {
-        stdio: 'inherit',
-        cwd: process.cwd()
-      });
+	program
+		.command('generate')
+		.description('Generate task files')
+		.action(() => {
+			const child = spawn('node', [devScriptPath, 'generate'], {
+				stdio: 'inherit',
+				cwd: process.cwd()
+			});
 
-      child.on('close', (code) => {
-        process.exit(code);
-      });
-    });
+			child.on('close', (code) => {
+				process.exit(code);
+			});
+		});
 
-  program.parse(process.argv);
+	program.parse(process.argv);
 }

jest.config.js

@@ -1,56 +1,56 @@
 export default {
-  // Use Node.js environment for testing
-  testEnvironment: 'node',
+	// Use Node.js environment for testing
+	testEnvironment: 'node',
 
-  // Automatically clear mock calls between every test
-  clearMocks: true,
+	// Automatically clear mock calls between every test
+	clearMocks: true,
 
-  // Indicates whether the coverage information should be collected while executing the test
-  collectCoverage: false,
+	// Indicates whether the coverage information should be collected while executing the test
+	collectCoverage: false,
 
-  // The directory where Jest should output its coverage files
-  coverageDirectory: 'coverage',
+	// The directory where Jest should output its coverage files
+	coverageDirectory: 'coverage',
 
-  // A list of paths to directories that Jest should use to search for files in
-  roots: ['<rootDir>/tests'],
+	// A list of paths to directories that Jest should use to search for files in
+	roots: ['<rootDir>/tests'],
 
-  // The glob patterns Jest uses to detect test files
-  testMatch: [
-    '**/__tests__/**/*.js',
-    '**/?(*.)+(spec|test).js',
-    '**/tests/*.test.js'
-  ],
+	// The glob patterns Jest uses to detect test files
+	testMatch: [
+		'**/__tests__/**/*.js',
+		'**/?(*.)+(spec|test).js',
+		'**/tests/*.test.js'
+	],
 
-  // Transform files
-  transform: {},
+	// Transform files
+	transform: {},
 
-  // Disable transformations for node_modules
-  transformIgnorePatterns: ['/node_modules/'],
+	// Disable transformations for node_modules
+	transformIgnorePatterns: ['/node_modules/'],
 
-  // Set moduleNameMapper for absolute paths
-  moduleNameMapper: {
-    '^@/(.*)$': '<rootDir>/$1'
-  },
+	// Set moduleNameMapper for absolute paths
+	moduleNameMapper: {
+		'^@/(.*)$': '<rootDir>/$1'
+	},
 
-  // Setup module aliases
-  moduleDirectories: ['node_modules', '<rootDir>'],
+	// Setup module aliases
+	moduleDirectories: ['node_modules', '<rootDir>'],
 
-  // Configure test coverage thresholds
-  coverageThreshold: {
-    global: {
-      branches: 80,
-      functions: 80,
-      lines: 80,
-      statements: 80
-    }
-  },
+	// Configure test coverage thresholds
+	coverageThreshold: {
+		global: {
+			branches: 80,
+			functions: 80,
+			lines: 80,
+			statements: 80
+		}
+	},
 
-  // Generate coverage report in these formats
-  coverageReporters: ['text', 'lcov'],
+	// Generate coverage report in these formats
+	coverageReporters: ['text', 'lcov'],
 
-  // Verbose output
-  verbose: true,
+	// Verbose output
+	verbose: true,
 
-  // Setup file
-  setupFilesAfterEnv: ['<rootDir>/tests/setup.js']
+	// Setup file
+	setupFilesAfterEnv: ['<rootDir>/tests/setup.js']
 };

mcp-server/server.js

@@ -1,8 +1,8 @@
 #!/usr/bin/env node
 
-import TaskMasterMCPServer from "./src/index.js";
-import dotenv from "dotenv";
-import logger from "./src/logger.js";
+import TaskMasterMCPServer from './src/index.js';
+import dotenv from 'dotenv';
+import logger from './src/logger.js';
 
 // Load environment variables
 dotenv.config();
@@ -11,25 +11,25 @@ dotenv.config();
  * Start the MCP server
  */
 async function startServer() {
-  const server = new TaskMasterMCPServer();
+	const server = new TaskMasterMCPServer();
 
-  // Handle graceful shutdown
-  process.on("SIGINT", async () => {
-    await server.stop();
-    process.exit(0);
-  });
+	// Handle graceful shutdown
+	process.on('SIGINT', async () => {
+		await server.stop();
+		process.exit(0);
+	});
 
-  process.on("SIGTERM", async () => {
-    await server.stop();
-    process.exit(0);
-  });
+	process.on('SIGTERM', async () => {
+		await server.stop();
+		process.exit(0);
+	});
 
-  try {
-    await server.start();
-  } catch (error) {
-    logger.error(`Failed to start MCP server: ${error.message}`);
-    process.exit(1);
-  }
+	try {
+		await server.start();
+	} catch (error) {
+		logger.error(`Failed to start MCP server: ${error.message}`);
+		process.exit(1);
+	}
 }
 
 // Start the server

mcp-server/src/core/__tests__/context-manager.test.js

@@ -2,84 +2,90 @@ import { jest } from '@jest/globals';
 import { ContextManager } from '../context-manager.js';
 
 describe('ContextManager', () => {
-  let contextManager;
+	let contextManager;
 
-  beforeEach(() => {
-    contextManager = new ContextManager({
-      maxCacheSize: 10,
-      ttl: 1000, // 1 second for testing
-      maxContextSize: 1000
-    });
-  });
+	beforeEach(() => {
+		contextManager = new ContextManager({
+			maxCacheSize: 10,
+			ttl: 1000, // 1 second for testing
+			maxContextSize: 1000
+		});
+	});
 
-  describe('getContext', () => {
-    it('should create a new context when not in cache', async () => {
-      const context = await contextManager.getContext('test-id', { test: true });
-      expect(context.id).toBe('test-id');
-      expect(context.metadata.test).toBe(true);
-      expect(contextManager.stats.misses).toBe(1);
-      expect(contextManager.stats.hits).toBe(0);
-    });
+	describe('getContext', () => {
+		it('should create a new context when not in cache', async () => {
+			const context = await contextManager.getContext('test-id', {
+				test: true
+			});
+			expect(context.id).toBe('test-id');
+			expect(context.metadata.test).toBe(true);
+			expect(contextManager.stats.misses).toBe(1);
+			expect(contextManager.stats.hits).toBe(0);
+		});
 
-    it('should return cached context when available', async () => {
-      // First call creates the context
-      await contextManager.getContext('test-id', { test: true });
+		it('should return cached context when available', async () => {
+			// First call creates the context
+			await contextManager.getContext('test-id', { test: true });
 
-      // Second call should hit cache
-      const context = await contextManager.getContext('test-id', { test: true });
-      expect(context.id).toBe('test-id');
-      expect(context.metadata.test).toBe(true);
-      expect(contextManager.stats.hits).toBe(1);
-      expect(contextManager.stats.misses).toBe(1);
-    });
+			// Second call should hit cache
+			const context = await contextManager.getContext('test-id', {
+				test: true
+			});
+			expect(context.id).toBe('test-id');
+			expect(context.metadata.test).toBe(true);
+			expect(contextManager.stats.hits).toBe(1);
+			expect(contextManager.stats.misses).toBe(1);
+		});
 
-    it('should respect TTL settings', async () => {
-      // Create context
-      await contextManager.getContext('test-id', { test: true });
+		it('should respect TTL settings', async () => {
+			// Create context
+			await contextManager.getContext('test-id', { test: true });
 
-      // Wait for TTL to expire
-      await new Promise(resolve => setTimeout(resolve, 1100));
+			// Wait for TTL to expire
+			await new Promise((resolve) => setTimeout(resolve, 1100));
 
-      // Should create new context
-      await contextManager.getContext('test-id', { test: true });
-      expect(contextManager.stats.misses).toBe(2);
-      expect(contextManager.stats.hits).toBe(0);
-    });
-  });
+			// Should create new context
+			await contextManager.getContext('test-id', { test: true });
+			expect(contextManager.stats.misses).toBe(2);
+			expect(contextManager.stats.hits).toBe(0);
+		});
+	});
 
-  describe('updateContext', () => {
-    it('should update existing context metadata', async () => {
-      await contextManager.getContext('test-id', { initial: true });
-      const updated = await contextManager.updateContext('test-id', { updated: true });
+	describe('updateContext', () => {
+		it('should update existing context metadata', async () => {
+			await contextManager.getContext('test-id', { initial: true });
+			const updated = await contextManager.updateContext('test-id', {
+				updated: true
+			});
 
-      expect(updated.metadata.initial).toBe(true);
-      expect(updated.metadata.updated).toBe(true);
-    });
-  });
+			expect(updated.metadata.initial).toBe(true);
+			expect(updated.metadata.updated).toBe(true);
+		});
+	});
 
-  describe('invalidateContext', () => {
-    it('should remove context from cache', async () => {
-      await contextManager.getContext('test-id', { test: true });
-      contextManager.invalidateContext('test-id', { test: true });
+	describe('invalidateContext', () => {
+		it('should remove context from cache', async () => {
+			await contextManager.getContext('test-id', { test: true });
+			contextManager.invalidateContext('test-id', { test: true });
 
-      // Should be a cache miss
-      await contextManager.getContext('test-id', { test: true });
-      expect(contextManager.stats.invalidations).toBe(1);
-      expect(contextManager.stats.misses).toBe(2);
-    });
-  });
+			// Should be a cache miss
+			await contextManager.getContext('test-id', { test: true });
+			expect(contextManager.stats.invalidations).toBe(1);
+			expect(contextManager.stats.misses).toBe(2);
+		});
+	});
 
-  describe('getStats', () => {
-    it('should return current cache statistics', async () => {
-      await contextManager.getContext('test-id', { test: true });
-      const stats = contextManager.getStats();
+	describe('getStats', () => {
+		it('should return current cache statistics', async () => {
+			await contextManager.getContext('test-id', { test: true });
+			const stats = contextManager.getStats();
 
-      expect(stats.hits).toBe(0);
-      expect(stats.misses).toBe(1);
-      expect(stats.invalidations).toBe(0);
-      expect(stats.size).toBe(1);
-      expect(stats.maxSize).toBe(10);
-      expect(stats.ttl).toBe(1000);
-    });
-  });
+			expect(stats.hits).toBe(0);
+			expect(stats.misses).toBe(1);
+			expect(stats.invalidations).toBe(0);
+			expect(stats.size).toBe(1);
+			expect(stats.maxSize).toBe(10);
+			expect(stats.ttl).toBe(1000);
+		});
+	});
 });

mcp-server/src/core/context-manager.js

@@ -15,155 +15,156 @@ import { LRUCache } from 'lru-cache';
  */
 
 export class ContextManager {
-  /**
-   * Create a new ContextManager instance
-   * @param {ContextManagerConfig} config - Configuration options
-   */
-  constructor(config = {}) {
-    this.config = {
-      maxCacheSize: config.maxCacheSize || 1000,
-      ttl: config.ttl || 1000 * 60 * 5, // 5 minutes default
-      maxContextSize: config.maxContextSize || 4000
-    };
+	/**
+	 * Create a new ContextManager instance
+	 * @param {ContextManagerConfig} config - Configuration options
+	 */
+	constructor(config = {}) {
+		this.config = {
+			maxCacheSize: config.maxCacheSize || 1000,
+			ttl: config.ttl || 1000 * 60 * 5, // 5 minutes default
+			maxContextSize: config.maxContextSize || 4000
+		};
 
-    // Initialize LRU cache for context data
-    this.cache = new LRUCache({
-      max: this.config.maxCacheSize,
-      ttl: this.config.ttl,
-      updateAgeOnGet: true
-    });
+		// Initialize LRU cache for context data
+		this.cache = new LRUCache({
+			max: this.config.maxCacheSize,
+			ttl: this.config.ttl,
+			updateAgeOnGet: true
+		});
 
-    // Cache statistics
-    this.stats = {
-      hits: 0,
-      misses: 0,
-      invalidations: 0
-    };
-  }
+		// Cache statistics
+		this.stats = {
+			hits: 0,
+			misses: 0,
+			invalidations: 0
+		};
+	}
 
-  /**
-   * Create a new context or retrieve from cache
-   * @param {string} contextId - Unique identifier for the context
-   * @param {Object} metadata - Additional metadata for the context
-   * @returns {Object} Context object with metadata
-   */
-  async getContext(contextId, metadata = {}) {
-    const cacheKey = this._getCacheKey(contextId, metadata);
+	/**
+	 * Create a new context or retrieve from cache
+	 * @param {string} contextId - Unique identifier for the context
+	 * @param {Object} metadata - Additional metadata for the context
+	 * @returns {Object} Context object with metadata
+	 */
+	async getContext(contextId, metadata = {}) {
+		const cacheKey = this._getCacheKey(contextId, metadata);
 
-    // Try to get from cache first
-    const cached = this.cache.get(cacheKey);
-    if (cached) {
-      this.stats.hits++;
-      return cached;
-    }
+		// Try to get from cache first
+		const cached = this.cache.get(cacheKey);
+		if (cached) {
+			this.stats.hits++;
+			return cached;
+		}
 
-    this.stats.misses++;
+		this.stats.misses++;
 
-    // Create new context if not in cache
-    const context = {
-      id: contextId,
-      metadata: {
-        ...metadata,
-        created: new Date().toISOString()
-      }
-    };
+		// Create new context if not in cache
+		const context = {
+			id: contextId,
+			metadata: {
+				...metadata,
+				created: new Date().toISOString()
+			}
+		};
 
-    // Cache the new context
-    this.cache.set(cacheKey, context);
+		// Cache the new context
+		this.cache.set(cacheKey, context);
 
-    return context;
-  }
+		return context;
+	}
 
-  /**
-   * Update an existing context
-   * @param {string} contextId - Context identifier
-   * @param {Object} updates - Updates to apply to the context
-   * @returns {Object} Updated context
-   */
-  async updateContext(contextId, updates) {
-    const context = await this.getContext(contextId);
+	/**
+	 * Update an existing context
+	 * @param {string} contextId - Context identifier
+	 * @param {Object} updates - Updates to apply to the context
+	 * @returns {Object} Updated context
+	 */
+	async updateContext(contextId, updates) {
+		const context = await this.getContext(contextId);
 
-    // Apply updates to context
-    Object.assign(context.metadata, updates);
+		// Apply updates to context
+		Object.assign(context.metadata, updates);
 
-    // Update cache
-    const cacheKey = this._getCacheKey(contextId, context.metadata);
-    this.cache.set(cacheKey, context);
+		// Update cache
+		const cacheKey = this._getCacheKey(contextId, context.metadata);
+		this.cache.set(cacheKey, context);
 
-    return context;
-  }
+		return context;
+	}
 
-  /**
-   * Invalidate a context in the cache
-   * @param {string} contextId - Context identifier
-   * @param {Object} metadata - Metadata used in the cache key
-   */
-  invalidateContext(contextId, metadata = {}) {
-    const cacheKey = this._getCacheKey(contextId, metadata);
-    this.cache.delete(cacheKey);
-    this.stats.invalidations++;
-  }
+	/**
+	 * Invalidate a context in the cache
+	 * @param {string} contextId - Context identifier
+	 * @param {Object} metadata - Metadata used in the cache key
+	 */
+	invalidateContext(contextId, metadata = {}) {
+		const cacheKey = this._getCacheKey(contextId, metadata);
+		this.cache.delete(cacheKey);
+		this.stats.invalidations++;
+	}
 
-  /**
-   * Get cached data associated with a specific key.
-   * Increments cache hit stats if found.
-   * @param {string} key - The cache key.
-   * @returns {any | undefined} The cached data or undefined if not found/expired.
-   */
-  getCachedData(key) {
-    const cached = this.cache.get(key);
-    if (cached !== undefined) { // Check for undefined specifically, as null/false might be valid cached values
-      this.stats.hits++;
-      return cached;
-    }
-    this.stats.misses++;
-    return undefined;
-  }
+	/**
+	 * Get cached data associated with a specific key.
+	 * Increments cache hit stats if found.
+	 * @param {string} key - The cache key.
+	 * @returns {any | undefined} The cached data or undefined if not found/expired.
+	 */
+	getCachedData(key) {
+		const cached = this.cache.get(key);
+		if (cached !== undefined) {
+			// Check for undefined specifically, as null/false might be valid cached values
+			this.stats.hits++;
+			return cached;
+		}
+		this.stats.misses++;
+		return undefined;
+	}
 
-  /**
-   * Set data in the cache with a specific key.
-   * @param {string} key - The cache key.
-   * @param {any} data - The data to cache.
-   */
-  setCachedData(key, data) {
-    this.cache.set(key, data);
-  }
+	/**
+	 * Set data in the cache with a specific key.
+	 * @param {string} key - The cache key.
+	 * @param {any} data - The data to cache.
+	 */
+	setCachedData(key, data) {
+		this.cache.set(key, data);
+	}
 
-  /**
-   * Invalidate a specific cache key.
-   * Increments invalidation stats.
-   * @param {string} key - The cache key to invalidate.
-   */
-  invalidateCacheKey(key) {
-    this.cache.delete(key);
-    this.stats.invalidations++;
-  }
+	/**
+	 * Invalidate a specific cache key.
+	 * Increments invalidation stats.
+	 * @param {string} key - The cache key to invalidate.
+	 */
+	invalidateCacheKey(key) {
+		this.cache.delete(key);
+		this.stats.invalidations++;
+	}
 
-  /**
-   * Get cache statistics
-   * @returns {Object} Cache statistics
-   */
-  getStats() {
-    return {
-      hits: this.stats.hits,
-      misses: this.stats.misses,
-      invalidations: this.stats.invalidations,
-      size: this.cache.size,
-      maxSize: this.config.maxCacheSize,
-      ttl: this.config.ttl
-    };
-  }
+	/**
+	 * Get cache statistics
+	 * @returns {Object} Cache statistics
+	 */
+	getStats() {
+		return {
+			hits: this.stats.hits,
+			misses: this.stats.misses,
+			invalidations: this.stats.invalidations,
+			size: this.cache.size,
+			maxSize: this.config.maxCacheSize,
+			ttl: this.config.ttl
+		};
+	}
 
-  /**
-   * Generate a cache key from context ID and metadata
-   * @private
-   * @deprecated No longer used for direct cache key generation outside the manager.
-   *             Prefer generating specific keys in calling functions.
-   */
-  _getCacheKey(contextId, metadata) {
-    // Kept for potential backward compatibility or internal use if needed later.
-    return `${contextId}:${JSON.stringify(metadata)}`;
-  }
+	/**
+	 * Generate a cache key from context ID and metadata
+	 * @private
+	 * @deprecated No longer used for direct cache key generation outside the manager.
+	 *             Prefer generating specific keys in calling functions.
+	 */
+	_getCacheKey(contextId, metadata) {
+		// Kept for potential backward compatibility or internal use if needed later.
+		return `${contextId}:${JSON.stringify(metadata)}`;
+	}
 }
 
 // Export a singleton instance with default config

mcp-server/src/core/direct-functions/add-dependency.js

@@ -4,82 +4,103 @@
  */
 
 import { addDependency } from '../../../../scripts/modules/dependency-manager.js';
-import { findTasksJsonPath } from '../utils/path-utils.js';
-import { enableSilentMode, disableSilentMode } from '../../../../scripts/modules/utils.js';
+import {
+	enableSilentMode,
+	disableSilentMode
+} from '../../../../scripts/modules/utils.js';
 
 /**
  * Direct function wrapper for addDependency with error handling.
  *
  * @param {Object} args - Command arguments
+ * @param {string} args.tasksJsonPath - Explicit path to the tasks.json file.
  * @param {string|number} args.id - Task ID to add dependency to
  * @param {string|number} args.dependsOn - Task ID that will become a dependency
- * @param {string} [args.file] - Path to the tasks file
- * @param {string} [args.projectRoot] - Project root directory
  * @param {Object} log - Logger object
  * @returns {Promise<Object>} - Result object with success status and data/error information
  */
 export async function addDependencyDirect(args, log) {
-  try {
-    log.info(`Adding dependency with args: ${JSON.stringify(args)}`);
+	// Destructure expected args
+	const { tasksJsonPath, id, dependsOn } = args;
+	try {
+		log.info(`Adding dependency with args: ${JSON.stringify(args)}`);
 
-    // Validate required parameters
-    if (!args.id) {
-      return {
-        success: false,
-        error: {
-          code: 'INPUT_VALIDATION_ERROR',
-          message: 'Task ID (id) is required'
-        }
-      };
-    }
+		// Check if tasksJsonPath was provided
+		if (!tasksJsonPath) {
+			log.error('addDependencyDirect called without tasksJsonPath');
+			return {
+				success: false,
+				error: {
+					code: 'MISSING_ARGUMENT',
+					message: 'tasksJsonPath is required'
+				}
+			};
+		}
 
-    if (!args.dependsOn) {
-      return {
-        success: false,
-        error: {
-          code: 'INPUT_VALIDATION_ERROR',
-          message: 'Dependency ID (dependsOn) is required'
-        }
-      };
-    }
+		// Validate required parameters
+		if (!id) {
+			return {
+				success: false,
+				error: {
+					code: 'INPUT_VALIDATION_ERROR',
+					message: 'Task ID (id) is required'
+				}
+			};
+		}
 
-    // Find the tasks.json path
-    const tasksPath = findTasksJsonPath(args, log);
+		if (!dependsOn) {
+			return {
+				success: false,
+				error: {
+					code: 'INPUT_VALIDATION_ERROR',
+					message: 'Dependency ID (dependsOn) is required'
+				}
+			};
+		}
 
-    // Format IDs for the core function
-    const taskId = args.id.includes && args.id.includes('.') ? args.id : parseInt(args.id, 10);
-    const dependencyId = args.dependsOn.includes && args.dependsOn.includes('.') ? args.dependsOn : parseInt(args.dependsOn, 10);
+		// Use provided path
+		const tasksPath = tasksJsonPath;
 
-    log.info(`Adding dependency: task ${taskId} will depend on ${dependencyId}`);
+		// Format IDs for the core function
+		const taskId =
+			id && id.includes && id.includes('.') ? id : parseInt(id, 10);
+		const dependencyId =
+			dependsOn && dependsOn.includes && dependsOn.includes('.')
+				? dependsOn
+				: parseInt(dependsOn, 10);
 
-    // Enable silent mode to prevent console logs from interfering with JSON response
-    enableSilentMode();
+		log.info(
+			`Adding dependency: task ${taskId} will depend on ${dependencyId}`
+		);
 
-    // Call the core function
-    await addDependency(tasksPath, taskId, dependencyId);
+		// Enable silent mode to prevent console logs from interfering with JSON response
+		enableSilentMode();
 
-    // Restore normal logging
-    disableSilentMode();
+		// Call the core function using the provided path
+		await addDependency(tasksPath, taskId, dependencyId);
 
-    return {
-      success: true,
-      data: {
-        message: `Successfully added dependency: Task ${taskId} now depends on ${dependencyId}`,
-        taskId: taskId,
-        dependencyId: dependencyId
-      }
-    };
-  } catch (error) {
-    // Make sure to restore normal logging even if there's an error
-    disableSilentMode();
+		// Restore normal logging
+		disableSilentMode();
 
-    log.error(`Error in addDependencyDirect: ${error.message}`);
-    return {
-      success: false,
-      error: {
-        code: 'CORE_FUNCTION_ERROR',
-        message: error.message
-      }
-    };
-  }
+		return {
+			success: true,
+			data: {
+				message: `Successfully added dependency: Task ${taskId} now depends on ${dependencyId}`,
+				taskId: taskId,
+				dependencyId: dependencyId
+			}
+		};
+	} catch (error) {
+		// Make sure to restore normal logging even if there's an error
+		disableSilentMode();
+
+		log.error(`Error in addDependencyDirect: ${error.message}`);
+		return {
+			success: false,
+			error: {
+				code: 'CORE_FUNCTION_ERROR',
+				message: error.message
+			}
+		};
+	}
 }

mcp-server/src/core/direct-functions/add-subtask.js

@@ -3,12 +3,15 @@
  */
 
 import { addSubtask } from '../../../../scripts/modules/task-manager.js';
-import { findTasksJsonPath } from '../utils/path-utils.js';
-import { enableSilentMode, disableSilentMode } from '../../../../scripts/modules/utils.js';
+import {
+	enableSilentMode,
+	disableSilentMode
+} from '../../../../scripts/modules/utils.js';
 
 /**
  * Add a subtask to an existing task
  * @param {Object} args - Function arguments
+ * @param {string} args.tasksJsonPath - Explicit path to the tasks.json file.
  * @param {string} args.id - Parent task ID
  * @param {string} [args.taskId] - Existing task ID to convert to subtask (optional)
  * @param {string} [args.title] - Title for new subtask (when creating a new subtask)
@@ -16,113 +19,147 @@ import { enableSilentMode, disableSilentMode } from '../../../../scripts/modules
  * @param {string} [args.details] - Implementation details for new subtask
  * @param {string} [args.status] - Status for new subtask (default: 'pending')
  * @param {string} [args.dependencies] - Comma-separated list of dependency IDs
- * @param {string} [args.file] - Path to the tasks file
  * @param {boolean} [args.skipGenerate] - Skip regenerating task files
- * @param {string} [args.projectRoot] - Project root directory
  * @param {Object} log - Logger object
  * @returns {Promise<{success: boolean, data?: Object, error?: string}>}
  */
 export async function addSubtaskDirect(args, log) {
-  try {
-    log.info(`Adding subtask with args: ${JSON.stringify(args)}`);
+	// Destructure expected args
+	const {
+		tasksJsonPath,
+		id,
+		taskId,
+		title,
+		description,
+		details,
+		status,
+		dependencies: dependenciesStr,
+		skipGenerate
+	} = args;
+	try {
+		log.info(`Adding subtask with args: ${JSON.stringify(args)}`);
 
-    if (!args.id) {
-      return {
-        success: false,
-        error: {
-          code: 'INPUT_VALIDATION_ERROR',
-          message: 'Parent task ID is required'
-        }
-      };
-    }
+		// Check if tasksJsonPath was provided
+		if (!tasksJsonPath) {
+			log.error('addSubtaskDirect called without tasksJsonPath');
+			return {
+				success: false,
+				error: {
+					code: 'MISSING_ARGUMENT',
+					message: 'tasksJsonPath is required'
+				}
+			};
+		}
 
-    // Either taskId or title must be provided
-    if (!args.taskId && !args.title) {
-      return {
-        success: false,
-        error: {
-          code: 'INPUT_VALIDATION_ERROR',
-          message: 'Either taskId or title must be provided'
-        }
-      };
-    }
+		if (!id) {
+			return {
+				success: false,
+				error: {
+					code: 'INPUT_VALIDATION_ERROR',
+					message: 'Parent task ID is required'
+				}
+			};
+		}
 
-    // Find the tasks.json path
-    const tasksPath = findTasksJsonPath(args, log);
+		// Either taskId or title must be provided
+		if (!taskId && !title) {
+			return {
+				success: false,
+				error: {
+					code: 'INPUT_VALIDATION_ERROR',
+					message: 'Either taskId or title must be provided'
+				}
+			};
+		}
 
-    // Parse dependencies if provided
-    let dependencies = [];
-    if (args.dependencies) {
-      dependencies = args.dependencies.split(',').map(id => {
-        // Handle both regular IDs and dot notation
-        return id.includes('.') ? id.trim() : parseInt(id.trim(), 10);
-      });
-    }
+		// Use provided path
+		const tasksPath = tasksJsonPath;
 
-    // Convert existingTaskId to a number if provided
-    const existingTaskId = args.taskId ? parseInt(args.taskId, 10) : null;
+		// Parse dependencies if provided
+		let dependencies = [];
+		if (dependenciesStr) {
+			dependencies = dependenciesStr.split(',').map((depId) => {
+				// Handle both regular IDs and dot notation
+				return depId.includes('.') ? depId.trim() : parseInt(depId.trim(), 10);
+			});
+		}
 
-    // Convert parent ID to a number
-    const parentId = parseInt(args.id, 10);
+		// Convert existingTaskId to a number if provided
+		const existingTaskId = taskId ? parseInt(taskId, 10) : null;
 
-    // Determine if we should generate files
-    const generateFiles = !args.skipGenerate;
+		// Convert parent ID to a number
+		const parentId = parseInt(id, 10);
 
-    // Enable silent mode to prevent console logs from interfering with JSON response
-    enableSilentMode();
+		// Determine if we should generate files
+		const generateFiles = !skipGenerate;
 
-    // Case 1: Convert existing task to subtask
-    if (existingTaskId) {
-      log.info(`Converting task ${existingTaskId} to a subtask of ${parentId}`);
-      const result = await addSubtask(tasksPath, parentId, existingTaskId, null, generateFiles);
+		// Enable silent mode to prevent console logs from interfering with JSON response
+		enableSilentMode();
 
-      // Restore normal logging
-      disableSilentMode();
+		// Case 1: Convert existing task to subtask
+		if (existingTaskId) {
+			log.info(`Converting task ${existingTaskId} to a subtask of ${parentId}`);
+			const result = await addSubtask(
+				tasksPath,
+				parentId,
+				existingTaskId,
+				null,
+				generateFiles
+			);
 
-      return {
-        success: true,
-        data: {
-          message: `Task ${existingTaskId} successfully converted to a subtask of task ${parentId}`,
-          subtask: result
-        }
-      };
-    } 
-    // Case 2: Create new subtask
-    else {
-      log.info(`Creating new subtask for parent task ${parentId}`);
+			// Restore normal logging
+			disableSilentMode();
 
-      const newSubtaskData = {
-        title: args.title,
-        description: args.description || '',
-        details: args.details || '',
-        status: args.status || 'pending',
-        dependencies: dependencies
-      };
+			return {
+				success: true,
+				data: {
+					message: `Task ${existingTaskId} successfully converted to a subtask of task ${parentId}`,
+					subtask: result
+				}
+			};
+		}
+		// Case 2: Create new subtask
+		else {
+			log.info(`Creating new subtask for parent task ${parentId}`);
 
-      const result = await addSubtask(tasksPath, parentId, null, newSubtaskData, generateFiles);
+			const newSubtaskData = {
+				title: title,
+				description: description || '',
+				details: details || '',
+				status: status || 'pending',
+				dependencies: dependencies
+			};
 
-      // Restore normal logging
-      disableSilentMode();
+			const result = await addSubtask(
+				tasksPath,
+				parentId,
+				null,
+				newSubtaskData,
+				generateFiles
+			);
 
-      return {
-        success: true,
-        data: {
-          message: `New subtask ${parentId}.${result.id} successfully created`,
-          subtask: result
-        }
-      };
-    }
-  } catch (error) {
-    // Make sure to restore normal logging even if there's an error
-    disableSilentMode();
+			// Restore normal logging
+			disableSilentMode();
 
-    log.error(`Error in addSubtaskDirect: ${error.message}`);
-    return {
-      success: false,
-      error: {
-        code: 'CORE_FUNCTION_ERROR',
-        message: error.message
-      }
-    };
-  }
+			return {
+				success: true,
+				data: {
+					message: `New subtask ${parentId}.${result.id} successfully created`,
+					subtask: result
+				}
+			};
+		}
+	} catch (error) {
+		// Make sure to restore normal logging even if there's an error
+		disableSilentMode();
+
+		log.error(`Error in addSubtaskDirect: ${error.message}`);
+		return {
+			success: false,
+			error: {
+				code: 'CORE_FUNCTION_ERROR',
+				message: error.message
+			}
+		};
+	}
 }

mcp-server/src/core/direct-functions/add-task.js

@@ -4,173 +4,256 @@
  */
 
 import { addTask } from '../../../../scripts/modules/task-manager.js';
-import { findTasksJsonPath } from '../utils/path-utils.js';
-import { enableSilentMode, disableSilentMode } from '../../../../scripts/modules/utils.js';
-import { getAnthropicClientForMCP, getModelConfig } from '../utils/ai-client-utils.js';
-import { _buildAddTaskPrompt, parseTaskJsonResponse, _handleAnthropicStream } from '../../../../scripts/modules/ai-services.js';
+import {
+	enableSilentMode,
+	disableSilentMode
+} from '../../../../scripts/modules/utils.js';
+import {
+	getAnthropicClientForMCP,
+	getModelConfig
+} from '../utils/ai-client-utils.js';
+import {
+	_buildAddTaskPrompt,
+	parseTaskJsonResponse,
+	_handleAnthropicStream
+} from '../../../../scripts/modules/ai-services.js';
 
 /**
  * Direct function wrapper for adding a new task with error handling.
  *
  * @param {Object} args - Command arguments
- * @param {string} args.prompt - Description of the task to add
- * @param {Array<number>} [args.dependencies=[]] - Task dependencies as array of IDs
+ * @param {string} [args.prompt] - Description of the task to add (required if not using manual fields)
+ * @param {string} [args.title] - Task title (for manual task creation)
+ * @param {string} [args.description] - Task description (for manual task creation)
+ * @param {string} [args.details] - Implementation details (for manual task creation)
+ * @param {string} [args.testStrategy] - Test strategy (for manual task creation)
+ * @param {string} [args.dependencies] - Comma-separated list of task IDs this task depends on
  * @param {string} [args.priority='medium'] - Task priority (high, medium, low)
- * @param {string} [args.file] - Path to the tasks file
+ * @param {string} [args.file='tasks/tasks.json'] - Path to the tasks file
  * @param {string} [args.projectRoot] - Project root directory
- * @param {boolean} [args.research] - Whether to use research capabilities for task creation
+ * @param {boolean} [args.research=false] - Whether to use research capabilities for task creation
  * @param {Object} log - Logger object
  * @param {Object} context - Additional context (reportProgress, session)
  * @returns {Promise<Object>} - Result object { success: boolean, data?: any, error?: { code: string, message: string } }
  */
 export async function addTaskDirect(args, log, context = {}) {
-  try {
-    // Enable silent mode to prevent console logs from interfering with JSON response
-    enableSilentMode();
+	// Destructure expected args
+	const { tasksJsonPath, prompt, dependencies, priority, research } = args;
+	try {
+		// Enable silent mode to prevent console logs from interfering with JSON response
+		enableSilentMode();
 
-    // Find the tasks.json path
-    const tasksPath = findTasksJsonPath(args, log);
+		// Check if tasksJsonPath was provided
+		if (!tasksJsonPath) {
+			log.error('addTaskDirect called without tasksJsonPath');
+			disableSilentMode(); // Disable before returning
+			return {
+				success: false,
+				error: {
+					code: 'MISSING_ARGUMENT',
+					message: 'tasksJsonPath is required'
+				}
+			};
+		}
 
-    // Check required parameters
-    if (!args.prompt) {
-      log.error('Missing required parameter: prompt');
-      disableSilentMode();
-      return {
-        success: false,
-        error: {
-          code: 'MISSING_PARAMETER',
-          message: 'The prompt parameter is required for adding a task'
-        }
-      };
-    }
+		// Use provided path
+		const tasksPath = tasksJsonPath;
 
-    // Extract and prepare parameters
-    const prompt = args.prompt;
-    const dependencies = Array.isArray(args.dependencies) 
-      ? args.dependencies 
-      : (args.dependencies ? String(args.dependencies).split(',').map(id => parseInt(id.trim(), 10)) : []);
-    const priority = args.priority || 'medium';
+		// Check if this is manual task creation or AI-driven task creation
+		const isManualCreation = args.title && args.description;
 
-    log.info(`Adding new task with prompt: "${prompt}", dependencies: [${dependencies.join(', ')}], priority: ${priority}`);
+		// Check required parameters
+		if (!args.prompt && !isManualCreation) {
+			log.error(
+				'Missing required parameters: either prompt or title+description must be provided'
+			);
+			disableSilentMode();
+			return {
+				success: false,
+				error: {
+					code: 'MISSING_PARAMETER',
+					message:
+						'Either the prompt parameter or both title and description parameters are required for adding a task'
+				}
+			};
+		}
 
-    // Extract context parameters for advanced functionality
-    // Commenting out reportProgress extraction
-    // const { reportProgress, session } = context; 
-    const { session } = context; // Keep session
+		// Extract and prepare parameters
+		const taskPrompt = prompt;
+		const taskDependencies = Array.isArray(dependencies)
+			? dependencies
+			: dependencies
+				? String(dependencies)
+						.split(',')
+						.map((id) => parseInt(id.trim(), 10))
+				: [];
+		const taskPriority = priority || 'medium';
 
-    // Initialize AI client with session environment
-    let localAnthropic;
-    try {
-      localAnthropic = getAnthropicClientForMCP(session, log);
-    } catch (error) {
-      log.error(`Failed to initialize Anthropic client: ${error.message}`);
-      disableSilentMode();
-      return {
-        success: false,
-        error: {
-          code: 'AI_CLIENT_ERROR',
-          message: `Cannot initialize AI client: ${error.message}`
-        }
-      };
-    }
+		// Extract context parameters for advanced functionality
+		const { session } = context;
 
-    // Get model configuration from session
-    const modelConfig = getModelConfig(session);
+		let manualTaskData = null;
 
-    // Read existing tasks to provide context
-    let tasksData;
-    try {
-      const fs = await import('fs');
-      tasksData = JSON.parse(fs.readFileSync(tasksPath, 'utf8'));
-    } catch (error) {
-      log.warn(`Could not read existing tasks for context: ${error.message}`);
-      tasksData = { tasks: [] };
-    }
+		if (isManualCreation) {
+			// Create manual task data object
+			manualTaskData = {
+				title: args.title,
+				description: args.description,
+				details: args.details || '',
+				testStrategy: args.testStrategy || ''
+			};
 
-    // Build prompts for AI
-    const { systemPrompt, userPrompt } = _buildAddTaskPrompt(prompt, tasksData.tasks);
+			log.info(
+				`Adding new task manually with title: "${args.title}", dependencies: [${taskDependencies.join(', ')}], priority: ${priority}`
+			);
 
-    // Make the AI call using the streaming helper
-    let responseText;
-    try {
-      responseText = await _handleAnthropicStream(
-        localAnthropic,
-        {
-          model: modelConfig.model,
-          max_tokens: modelConfig.maxTokens,
-          temperature: modelConfig.temperature,
-          messages: [{ role: "user", content: userPrompt }],
-          system: systemPrompt
-        },
-        {
-          // reportProgress: context.reportProgress, // Commented out to prevent Cursor stroking out 
-          mcpLog: log
-        }
-      );
-    } catch (error) {
-      log.error(`AI processing failed: ${error.message}`);
-      disableSilentMode();
-      return {
-        success: false,
-        error: {
-          code: 'AI_PROCESSING_ERROR',
-          message: `Failed to generate task with AI: ${error.message}`
-        }
-      };
-    }
+			// Call the addTask function with manual task data
+			const newTaskId = await addTask(
+				tasksPath,
+				null, // No prompt needed for manual creation
+				taskDependencies,
+				priority,
+				{
+					mcpLog: log,
+					session
+				},
+				'json', // Use JSON output format to prevent console output
+				null, // No custom environment
+				manualTaskData // Pass the manual task data
+			);
 
-    // Parse the AI response
-    let taskDataFromAI;
-    try {
-      taskDataFromAI = parseTaskJsonResponse(responseText);
-    } catch (error) {
-      log.error(`Failed to parse AI response: ${error.message}`);
-      disableSilentMode();
-      return {
-        success: false,
-        error: {
-          code: 'RESPONSE_PARSING_ERROR',
-          message: `Failed to parse AI response: ${error.message}`
-        }
-      };
-    }
+			// Restore normal logging
+			disableSilentMode();
 
-    // Call the addTask function with 'json' outputFormat to prevent console output when called via MCP
-    const newTaskId = await addTask(
-      tasksPath, 
-      prompt, 
-      dependencies, 
-      priority, 
-      { 
-        // reportProgress, // Commented out
-        mcpLog: log, 
-        session,
-        taskDataFromAI // Pass the parsed AI result
-      }, 
-      'json'
-    );
+			return {
+				success: true,
+				data: {
+					taskId: newTaskId,
+					message: `Successfully added new task #${newTaskId}`
+				}
+			};
+		} else {
+			// AI-driven task creation
+			log.info(
+				`Adding new task with prompt: "${prompt}", dependencies: [${taskDependencies.join(', ')}], priority: ${priority}`
+			);
 
-    // Restore normal logging
-    disableSilentMode();
+			// Initialize AI client with session environment
+			let localAnthropic;
+			try {
+				localAnthropic = getAnthropicClientForMCP(session, log);
+			} catch (error) {
+				log.error(`Failed to initialize Anthropic client: ${error.message}`);
+				disableSilentMode();
+				return {
+					success: false,
+					error: {
+						code: 'AI_CLIENT_ERROR',
+						message: `Cannot initialize AI client: ${error.message}`
+					}
+				};
+			}
 
-    return {
-      success: true,
-      data: {
-        taskId: newTaskId,
-        message: `Successfully added new task #${newTaskId}`
-      }
-    };
-  } catch (error) {
-    // Make sure to restore normal logging even if there's an error
-    disableSilentMode();
+			// Get model configuration from session
+			const modelConfig = getModelConfig(session);
 
-    log.error(`Error in addTaskDirect: ${error.message}`);
-    return {
-      success: false,
-      error: {
-        code: 'ADD_TASK_ERROR',
-        message: error.message
-      }
-    };
-  }
+			// Read existing tasks to provide context
+			let tasksData;
+			try {
+				const fs = await import('fs');
+				tasksData = JSON.parse(fs.readFileSync(tasksPath, 'utf8'));
+			} catch (error) {
+				log.warn(`Could not read existing tasks for context: ${error.message}`);
+				tasksData = { tasks: [] };
+			}
+
+			// Build prompts for AI
+			const { systemPrompt, userPrompt } = _buildAddTaskPrompt(
+				prompt,
+				tasksData.tasks
+			);
+
+			// Make the AI call using the streaming helper
+			let responseText;
+			try {
+				responseText = await _handleAnthropicStream(
+					localAnthropic,
+					{
+						model: modelConfig.model,
+						max_tokens: modelConfig.maxTokens,
+						temperature: modelConfig.temperature,
+						messages: [{ role: 'user', content: userPrompt }],
+						system: systemPrompt
+					},
+					{
+						mcpLog: log
+					}
+				);
+			} catch (error) {
+				log.error(`AI processing failed: ${error.message}`);
+				disableSilentMode();
+				return {
+					success: false,
+					error: {
+						code: 'AI_PROCESSING_ERROR',
+						message: `Failed to generate task with AI: ${error.message}`
+					}
+				};
+			}
+
+			// Parse the AI response
+			let taskDataFromAI;
+			try {
+				taskDataFromAI = parseTaskJsonResponse(responseText);
+			} catch (error) {
+				log.error(`Failed to parse AI response: ${error.message}`);
+				disableSilentMode();
+				return {
+					success: false,
+					error: {
+						code: 'RESPONSE_PARSING_ERROR',
+						message: `Failed to parse AI response: ${error.message}`
+					}
+				};
+			}
+
+			// Call the addTask function with 'json' outputFormat to prevent console output when called via MCP
+			const newTaskId = await addTask(
+				tasksPath,
+				prompt,
+				taskDependencies,
+				priority,
+				{
+					mcpLog: log,
+					session
+				},
+				'json',
+				null,
+				taskDataFromAI // Pass the parsed AI result as the manual task data
+			);
+
+			// Restore normal logging
+			disableSilentMode();
+
+			return {
+				success: true,
+				data: {
+					taskId: newTaskId,
+					message: `Successfully added new task #${newTaskId}`
+				}
+			};
+		}
+	} catch (error) {
+		// Make sure to restore normal logging even if there's an error
+		disableSilentMode();
+
+		log.error(`Error in addTaskDirect: ${error.message}`);
+		return {
+			success: false,
+			error: {
+				code: 'ADD_TASK_ERROR',
+				message: error.message
+			}
+		};
+	}
 }

mcp-server/src/core/direct-functions/analyze-task-complexity.js

@@ -3,154 +3,180 @@
  */
 
 import { analyzeTaskComplexity } from '../../../../scripts/modules/task-manager.js';
-import { findTasksJsonPath } from '../utils/path-utils.js';
-import { enableSilentMode, disableSilentMode, isSilentMode, readJSON } from '../../../../scripts/modules/utils.js';
+import {
+	enableSilentMode,
+	disableSilentMode,
+	isSilentMode,
+	readJSON
+} from '../../../../scripts/modules/utils.js';
 import fs from 'fs';
 import path from 'path';
 
 /**
  * Analyze task complexity and generate recommendations
  * @param {Object} args - Function arguments
- * @param {string} [args.file] - Path to the tasks file
- * @param {string} [args.output] - Output file path for the report
+ * @param {string} args.tasksJsonPath - Explicit path to the tasks.json file.
+ * @param {string} args.outputPath - Explicit absolute path to save the report.
  * @param {string} [args.model] - LLM model to use for analysis
  * @param {string|number} [args.threshold] - Minimum complexity score to recommend expansion (1-10)
  * @param {boolean} [args.research] - Use Perplexity AI for research-backed complexity analysis
- * @param {string} [args.projectRoot] - Project root directory
  * @param {Object} log - Logger object
  * @param {Object} [context={}] - Context object containing session data
  * @returns {Promise<{success: boolean, data?: Object, error?: {code: string, message: string}}>}
  */
 export async function analyzeTaskComplexityDirect(args, log, context = {}) {
-  const { session } = context; // Only extract session, not reportProgress
+	const { session } = context; // Only extract session, not reportProgress
+	// Destructure expected args
+	const { tasksJsonPath, outputPath, model, threshold, research } = args;
 
-  try {
-    log.info(`Analyzing task complexity with args: ${JSON.stringify(args)}`);
+	try {
+		log.info(`Analyzing task complexity with args: ${JSON.stringify(args)}`);
 
-    // Find the tasks.json path
-    const tasksPath = findTasksJsonPath(args, log);
+		// Check if required paths were provided
+		if (!tasksJsonPath) {
+			log.error('analyzeTaskComplexityDirect called without tasksJsonPath');
+			return {
+				success: false,
+				error: {
+					code: 'MISSING_ARGUMENT',
+					message: 'tasksJsonPath is required'
+				}
+			};
+		}
+		if (!outputPath) {
+			log.error('analyzeTaskComplexityDirect called without outputPath');
+			return {
+				success: false,
+				error: { code: 'MISSING_ARGUMENT', message: 'outputPath is required' }
+			};
+		}
 
-    // Determine output path
-    let outputPath = args.output || 'scripts/task-complexity-report.json';
-    if (!path.isAbsolute(outputPath) && args.projectRoot) {
-      outputPath = path.join(args.projectRoot, outputPath);
-    }
+		// Use the provided paths
+		const tasksPath = tasksJsonPath;
+		const resolvedOutputPath = outputPath;
 
-    log.info(`Analyzing task complexity from: ${tasksPath}`);
-    log.info(`Output report will be saved to: ${outputPath}`);
+		log.info(`Analyzing task complexity from: ${tasksPath}`);
+		log.info(`Output report will be saved to: ${resolvedOutputPath}`);
 
-    if (args.research) {
-      log.info('Using Perplexity AI for research-backed complexity analysis');
-    }
+		if (research) {
+			log.info('Using Perplexity AI for research-backed complexity analysis');
+		}
 
-    // Create options object for analyzeTaskComplexity
-    const options = {
-      file: tasksPath,
-      output: outputPath,
-      model: args.model,
-      threshold: args.threshold,
-      research: args.research === true
-    };
+		// Create options object for analyzeTaskComplexity using provided paths
+		const options = {
+			file: tasksPath,
+			output: resolvedOutputPath,
+			model: model,
+			threshold: threshold,
+			research: research === true
+		};
 
-    // Enable silent mode to prevent console logs from interfering with JSON response
-    const wasSilent = isSilentMode();
-    if (!wasSilent) {
-      enableSilentMode();
-    }
+		// Enable silent mode to prevent console logs from interfering with JSON response
+		const wasSilent = isSilentMode();
+		if (!wasSilent) {
+			enableSilentMode();
+		}
 
-    // Create a logWrapper that matches the expected mcpLog interface as specified in utilities.mdc
-    const logWrapper = {
-      info: (message, ...args) => log.info(message, ...args),
-      warn: (message, ...args) => log.warn(message, ...args),
-      error: (message, ...args) => log.error(message, ...args),
-      debug: (message, ...args) => log.debug && log.debug(message, ...args),
-      success: (message, ...args) => log.info(message, ...args) // Map success to info
-    };
+		// Create a logWrapper that matches the expected mcpLog interface as specified in utilities.mdc
+		const logWrapper = {
+			info: (message, ...args) => log.info(message, ...args),
+			warn: (message, ...args) => log.warn(message, ...args),
+			error: (message, ...args) => log.error(message, ...args),
+			debug: (message, ...args) => log.debug && log.debug(message, ...args),
+			success: (message, ...args) => log.info(message, ...args) // Map success to info
+		};
 
-    try {
-      // Call the core function with session and logWrapper as mcpLog
-      await analyzeTaskComplexity(options, {
-        session,
-        mcpLog: logWrapper // Use the wrapper instead of passing log directly
-      });
-    } catch (error) {
-      log.error(`Error in analyzeTaskComplexity: ${error.message}`);
-      return {
-        success: false,
-        error: {
-          code: 'ANALYZE_ERROR',
-          message: `Error running complexity analysis: ${error.message}`
-        }
-      };
-    } finally {
-      // Always restore normal logging in finally block, but only if we enabled it
-      if (!wasSilent) {
-        disableSilentMode();
-      }
-    }
+		try {
+			// Call the core function with session and logWrapper as mcpLog
+			await analyzeTaskComplexity(options, {
+				session,
+				mcpLog: logWrapper // Use the wrapper instead of passing log directly
+			});
+		} catch (error) {
+			log.error(`Error in analyzeTaskComplexity: ${error.message}`);
+			return {
+				success: false,
+				error: {
+					code: 'ANALYZE_ERROR',
+					message: `Error running complexity analysis: ${error.message}`
+				}
+			};
+		} finally {
+			// Always restore normal logging in finally block, but only if we enabled it
+			if (!wasSilent) {
+				disableSilentMode();
+			}
+		}
 
-    // Verify the report file was created
-    if (!fs.existsSync(outputPath)) {
-      return {
-        success: false,
-        error: {
-          code: 'ANALYZE_ERROR',
-          message: 'Analysis completed but no report file was created'
-        }
-      };
-    }
+		// Verify the report file was created
+		if (!fs.existsSync(resolvedOutputPath)) {
+			return {
+				success: false,
+				error: {
+					code: 'ANALYZE_ERROR',
+					message: 'Analysis completed but no report file was created'
+				}
+			};
+		}
 
-    // Read the report file
-    let report;
-    try {
-      report = JSON.parse(fs.readFileSync(outputPath, 'utf8'));
+		// Read the report file
+		let report;
+		try {
+			report = JSON.parse(fs.readFileSync(resolvedOutputPath, 'utf8'));
 
-      // Important: Handle different report formats
-      // The core function might return an array or an object with a complexityAnalysis property
-      const analysisArray = Array.isArray(report) ? report : 
-                           (report.complexityAnalysis || []);
+			// Important: Handle different report formats
+			// The core function might return an array or an object with a complexityAnalysis property
+			const analysisArray = Array.isArray(report)
+				? report
+				: report.complexityAnalysis || [];
 
-      // Count tasks by complexity
-      const highComplexityTasks = analysisArray.filter(t => t.complexityScore >= 8).length;
-      const mediumComplexityTasks = analysisArray.filter(t => t.complexityScore >= 5 && t.complexityScore < 8).length;
-      const lowComplexityTasks = analysisArray.filter(t => t.complexityScore < 5).length;
+			// Count tasks by complexity
+			const highComplexityTasks = analysisArray.filter(
+				(t) => t.complexityScore >= 8
+			).length;
+			const mediumComplexityTasks = analysisArray.filter(
+				(t) => t.complexityScore >= 5 && t.complexityScore < 8
+			).length;
+			const lowComplexityTasks = analysisArray.filter(
+				(t) => t.complexityScore < 5
+			).length;
 
-      return {
-        success: true,
-        data: {
-          message: `Task complexity analysis complete. Report saved to ${outputPath}`,
-          reportPath: outputPath,
-          reportSummary: {
-            taskCount: analysisArray.length,
-            highComplexityTasks,
-            mediumComplexityTasks,
-            lowComplexityTasks
-          }
-        }
-      };
-    } catch (parseError) {
-      log.error(`Error parsing report file: ${parseError.message}`);
-      return {
-        success: false,
-        error: {
-          code: 'REPORT_PARSE_ERROR',
-          message: `Error parsing complexity report: ${parseError.message}`
-        }
-      };
-    }
-  } catch (error) {
-    // Make sure to restore normal logging even if there's an error
-    if (isSilentMode()) {
-      disableSilentMode();
-    }
+			return {
+				success: true,
+				data: {
+					message: `Task complexity analysis complete. Report saved to ${resolvedOutputPath}`,
+					reportPath: resolvedOutputPath,
+					reportSummary: {
+						taskCount: analysisArray.length,
+						highComplexityTasks,
+						mediumComplexityTasks,
+						lowComplexityTasks
+					}
+				}
+			};
+		} catch (parseError) {
+			log.error(`Error parsing report file: ${parseError.message}`);
+			return {
+				success: false,
+				error: {
+					code: 'REPORT_PARSE_ERROR',
+					message: `Error parsing complexity report: ${parseError.message}`
+				}
+			};
+		}
+	} catch (error) {
+		// Make sure to restore normal logging even if there's an error
+		if (isSilentMode()) {
+			disableSilentMode();
+		}
 
-    log.error(`Error in analyzeTaskComplexityDirect: ${error.message}`);
-    return {
-      success: false,
-      error: {
-        code: 'CORE_FUNCTION_ERROR',
-        message: error.message
-      }
-    };
-  }
+		log.error(`Error in analyzeTaskComplexityDirect: ${error.message}`);
+		return {
+			success: false,
+			error: {
+				code: 'CORE_FUNCTION_ERROR',
+				message: error.message
+			}
+		};
+	}
 }

mcp-server/src/core/direct-functions/cache-stats.js

@@ -12,21 +12,21 @@ import { contextManager } from '../context-manager.js';
  * @returns {Object} - Cache statistics
  */
 export async function getCacheStatsDirect(args, log) {
-  try {
-    log.info('Retrieving cache statistics');
-    const stats = contextManager.getStats();
-    return {
-      success: true,
-      data: stats
-    };
-  } catch (error) {
-    log.error(`Error getting cache stats: ${error.message}`);
-    return {
-      success: false,
-      error: {
-        code: 'CACHE_STATS_ERROR',
-        message: error.message || 'Unknown error occurred'
-      }
-    };
-  }
+	try {
+		log.info('Retrieving cache statistics');
+		const stats = contextManager.getStats();
+		return {
+			success: true,
+			data: stats
+		};
+	} catch (error) {
+		log.error(`Error getting cache stats: ${error.message}`);
+		return {
+			success: false,
+			error: {
+				code: 'CACHE_STATS_ERROR',
+				message: error.message || 'Unknown error occurred'
+			}
+		};
+	}
 }

mcp-server/src/core/direct-functions/clear-subtasks.js

@@ -3,110 +3,126 @@
  */
 
 import { clearSubtasks } from '../../../../scripts/modules/task-manager.js';
-import { findTasksJsonPath } from '../utils/path-utils.js';
-import { enableSilentMode, disableSilentMode } from '../../../../scripts/modules/utils.js';
+import {
+	enableSilentMode,
+	disableSilentMode
+} from '../../../../scripts/modules/utils.js';
 import fs from 'fs';
 
 /**
  * Clear subtasks from specified tasks
  * @param {Object} args - Function arguments
+ * @param {string} args.tasksJsonPath - Explicit path to the tasks.json file.
  * @param {string} [args.id] - Task IDs (comma-separated) to clear subtasks from
  * @param {boolean} [args.all] - Clear subtasks from all tasks
- * @param {string} [args.file] - Path to the tasks file
- * @param {string} [args.projectRoot] - Project root directory
  * @param {Object} log - Logger object
  * @returns {Promise<{success: boolean, data?: Object, error?: {code: string, message: string}}>}
  */
 export async function clearSubtasksDirect(args, log) {
-  try {
-    log.info(`Clearing subtasks with args: ${JSON.stringify(args)}`);
+	// Destructure expected args
+	const { tasksJsonPath, id, all } = args;
+	try {
+		log.info(`Clearing subtasks with args: ${JSON.stringify(args)}`);
 
-    // Either id or all must be provided
-    if (!args.id && !args.all) {
-      return {
-        success: false,
-        error: {
-          code: 'INPUT_VALIDATION_ERROR',
-          message: 'Either task IDs with id parameter or all parameter must be provided'
-        }
-      };
-    }
+		// Check if tasksJsonPath was provided
+		if (!tasksJsonPath) {
+			log.error('clearSubtasksDirect called without tasksJsonPath');
+			return {
+				success: false,
+				error: {
+					code: 'MISSING_ARGUMENT',
+					message: 'tasksJsonPath is required'
+				}
+			};
+		}
 
-    // Find the tasks.json path
-    const tasksPath = findTasksJsonPath(args, log);
+		// Either id or all must be provided
+		if (!id && !all) {
+			return {
+				success: false,
+				error: {
+					code: 'INPUT_VALIDATION_ERROR',
+					message:
+						'Either task IDs with id parameter or all parameter must be provided'
+				}
+			};
+		}
 
-    // Check if tasks.json exists
-    if (!fs.existsSync(tasksPath)) {
-      return {
-        success: false,
-        error: {
-          code: 'FILE_NOT_FOUND_ERROR',
-          message: `Tasks file not found at ${tasksPath}`
-        }
-      };
-    }
+		// Use provided path
+		const tasksPath = tasksJsonPath;
 
-    let taskIds;
+		// Check if tasks.json exists
+		if (!fs.existsSync(tasksPath)) {
+			return {
+				success: false,
+				error: {
+					code: 'FILE_NOT_FOUND_ERROR',
+					message: `Tasks file not found at ${tasksPath}`
+				}
+			};
+		}
 
-    // If all is specified, get all task IDs
-    if (args.all) {
-      log.info('Clearing subtasks from all tasks');
-      const data = JSON.parse(fs.readFileSync(tasksPath, 'utf8'));
-      if (!data || !data.tasks || data.tasks.length === 0) {
-        return {
-          success: false,
-          error: {
-            code: 'INPUT_VALIDATION_ERROR',
-            message: 'No valid tasks found in the tasks file'
-          }
-        };
-      }
-      taskIds = data.tasks.map(t => t.id).join(',');
-    } else {
-      // Use the provided task IDs
-      taskIds = args.id;
-    }
+		let taskIds;
 
-    log.info(`Clearing subtasks from tasks: ${taskIds}`);
+		// If all is specified, get all task IDs
+		if (all) {
+			log.info('Clearing subtasks from all tasks');
+			const data = JSON.parse(fs.readFileSync(tasksPath, 'utf8'));
+			if (!data || !data.tasks || data.tasks.length === 0) {
+				return {
+					success: false,
+					error: {
+						code: 'INPUT_VALIDATION_ERROR',
+						message: 'No valid tasks found in the tasks file'
+					}
+				};
+			}
+			taskIds = data.tasks.map((t) => t.id).join(',');
+		} else {
+			// Use the provided task IDs
+			taskIds = id;
+		}
 
-    // Enable silent mode to prevent console logs from interfering with JSON response
-    enableSilentMode();
+		log.info(`Clearing subtasks from tasks: ${taskIds}`);
 
-    // Call the core function
-    clearSubtasks(tasksPath, taskIds);
+		// Enable silent mode to prevent console logs from interfering with JSON response
+		enableSilentMode();
 
-    // Restore normal logging
-    disableSilentMode();
+		// Call the core function
+		clearSubtasks(tasksPath, taskIds);
 
-    // Read the updated data to provide a summary
-    const updatedData = JSON.parse(fs.readFileSync(tasksPath, 'utf8'));
-    const taskIdArray = taskIds.split(',').map(id => parseInt(id.trim(), 10));
+		// Restore normal logging
+		disableSilentMode();
 
-    // Build a summary of what was done
-    const clearedTasksCount = taskIdArray.length;
-    const taskSummary = taskIdArray.map(id => {
-      const task = updatedData.tasks.find(t => t.id === id);
-      return task ? { id, title: task.title } : { id, title: 'Task not found' };
-    });
+		// Read the updated data to provide a summary
+		const updatedData = JSON.parse(fs.readFileSync(tasksPath, 'utf8'));
+		const taskIdArray = taskIds.split(',').map((id) => parseInt(id.trim(), 10));
 
-    return {
-      success: true,
-      data: {
-        message: `Successfully cleared subtasks from ${clearedTasksCount} task(s)`,
-        tasksCleared: taskSummary
-      }
-    };
-  } catch (error) {
-    // Make sure to restore normal logging even if there's an error
-    disableSilentMode();
+		// Build a summary of what was done
+		const clearedTasksCount = taskIdArray.length;
+		const taskSummary = taskIdArray.map((id) => {
+			const task = updatedData.tasks.find((t) => t.id === id);
+			return task ? { id, title: task.title } : { id, title: 'Task not found' };
+		});
 
-    log.error(`Error in clearSubtasksDirect: ${error.message}`);
-    return {
-      success: false,
-      error: {
-        code: 'CORE_FUNCTION_ERROR',
-        message: error.message
-      }
-    };
-  }
+		return {
+			success: true,
+			data: {
+				message: `Successfully cleared subtasks from ${clearedTasksCount} task(s)`,
+				tasksCleared: taskSummary
+			}
+		};
+	} catch (error) {
+		// Make sure to restore normal logging even if there's an error
+		disableSilentMode();
+
+		log.error(`Error in clearSubtasksDirect: ${error.message}`);
+		return {
+			success: false,
+			error: {
+				code: 'CORE_FUNCTION_ERROR',
+				message: error.message
+			}
+		};
+	}
 }

mcp-server/src/core/direct-functions/complexity-report.js

@@ -3,119 +3,128 @@
  * Direct function implementation for displaying complexity analysis report
  */
 
-import { readComplexityReport, enableSilentMode, disableSilentMode } from '../../../../scripts/modules/utils.js';
-import { findTasksJsonPath } from '../utils/path-utils.js';
+import {
+	readComplexityReport,
+	enableSilentMode,
+	disableSilentMode
+} from '../../../../scripts/modules/utils.js';
 import { getCachedOrExecute } from '../../tools/utils.js';
 import path from 'path';
 
 /**
  * Direct function wrapper for displaying the complexity report with error handling and caching.
  *
- * @param {Object} args - Command arguments containing file path option
+ * @param {Object} args - Command arguments containing reportPath.
+ * @param {string} args.reportPath - Explicit path to the complexity report file.
  * @param {Object} log - Logger object
  * @returns {Promise<Object>} - Result object with success status and data/error information
  */
 export async function complexityReportDirect(args, log) {
-  try {
-    log.info(`Getting complexity report with args: ${JSON.stringify(args)}`);
+	// Destructure expected args
+	const { reportPath } = args;
+	try {
+		log.info(`Getting complexity report with args: ${JSON.stringify(args)}`);
 
-    // Get tasks file path to determine project root for the default report location
-    let tasksPath;
-    try {
-      tasksPath = findTasksJsonPath(args, log);
-    } catch (error) {
-      log.warn(`Tasks file not found, using current directory: ${error.message}`);
-      // Continue with default or specified report path
-    }
+		// Check if reportPath was provided
+		if (!reportPath) {
+			log.error('complexityReportDirect called without reportPath');
+			return {
+				success: false,
+				error: { code: 'MISSING_ARGUMENT', message: 'reportPath is required' },
+				fromCache: false
+			};
+		}
 
-    // Get report file path from args or use default
-    const reportPath = args.file || path.join(process.cwd(), 'scripts', 'task-complexity-report.json');
+		// Use the provided report path
+		log.info(`Looking for complexity report at: ${reportPath}`);
 
-    log.info(`Looking for complexity report at: ${reportPath}`);
+		// Generate cache key based on report path
+		const cacheKey = `complexityReport:${reportPath}`;
 
-    // Generate cache key based on report path
-    const cacheKey = `complexityReport:${reportPath}`;
+		// Define the core action function to read the report
+		const coreActionFn = async () => {
+			try {
+				// Enable silent mode to prevent console logs from interfering with JSON response
+				enableSilentMode();
 
-    // Define the core action function to read the report
-    const coreActionFn = async () => {
-      try {
-        // Enable silent mode to prevent console logs from interfering with JSON response
-        enableSilentMode();
+				const report = readComplexityReport(reportPath);
 
-        const report = readComplexityReport(reportPath);
+				// Restore normal logging
+				disableSilentMode();
 
-        // Restore normal logging
-        disableSilentMode();
+				if (!report) {
+					log.warn(`No complexity report found at ${reportPath}`);
+					return {
+						success: false,
+						error: {
+							code: 'FILE_NOT_FOUND_ERROR',
+							message: `No complexity report found at ${reportPath}. Run 'analyze-complexity' first.`
+						}
+					};
+				}
 
-        if (!report) {
-          log.warn(`No complexity report found at ${reportPath}`);
-          return { 
-            success: false, 
-            error: { 
-              code: 'FILE_NOT_FOUND_ERROR', 
-              message: `No complexity report found at ${reportPath}. Run 'analyze-complexity' first.` 
-            }
-          };
-        }
+				return {
+					success: true,
+					data: {
+						report,
+						reportPath
+					}
+				};
+			} catch (error) {
+				// Make sure to restore normal logging even if there's an error
+				disableSilentMode();
 
-        return {
-          success: true,
-          data: {
-            report,
-            reportPath
-          }
-        };
-      } catch (error) {
-        // Make sure to restore normal logging even if there's an error
-        disableSilentMode();
+				log.error(`Error reading complexity report: ${error.message}`);
+				return {
+					success: false,
+					error: {
+						code: 'READ_ERROR',
+						message: error.message
+					}
+				};
+			}
+		};
 
-        log.error(`Error reading complexity report: ${error.message}`);
-        return { 
-          success: false, 
-          error: { 
-            code: 'READ_ERROR', 
-            message: error.message 
-          }
-        };
-      }
-    };
+		// Use the caching utility
+		try {
+			const result = await getCachedOrExecute({
+				cacheKey,
+				actionFn: coreActionFn,
+				log
+			});
+			log.info(
+				`complexityReportDirect completed. From cache: ${result.fromCache}`
+			);
+			return result; // Returns { success, data/error, fromCache }
+		} catch (error) {
+			// Catch unexpected errors from getCachedOrExecute itself
+			// Ensure silent mode is disabled
+			disableSilentMode();
 
-    // Use the caching utility
-    try {
-      const result = await getCachedOrExecute({
-        cacheKey,
-        actionFn: coreActionFn,
-        log
-      });
-      log.info(`complexityReportDirect completed. From cache: ${result.fromCache}`);
-      return result; // Returns { success, data/error, fromCache }
-    } catch (error) {
-      // Catch unexpected errors from getCachedOrExecute itself
-      // Ensure silent mode is disabled
-      disableSilentMode();
+			log.error(
+				`Unexpected error during getCachedOrExecute for complexityReport: ${error.message}`
+			);
+			return {
+				success: false,
+				error: {
+					code: 'UNEXPECTED_ERROR',
+					message: error.message
+				},
+				fromCache: false
+			};
+		}
+	} catch (error) {
+		// Ensure silent mode is disabled if an outer error occurs
+		disableSilentMode();
 
-      log.error(`Unexpected error during getCachedOrExecute for complexityReport: ${error.message}`);
-      return { 
-        success: false, 
-        error: { 
-          code: 'UNEXPECTED_ERROR', 
-          message: error.message 
-        }, 
-        fromCache: false 
-      };
-    }
-  } catch (error) {
-    // Ensure silent mode is disabled if an outer error occurs
-    disableSilentMode();
-    
-    log.error(`Error in complexityReportDirect: ${error.message}`);
-    return { 
-      success: false, 
-      error: { 
-        code: 'UNEXPECTED_ERROR', 
-        message: error.message 
-      }, 
-      fromCache: false 
-    };
-  }
+		log.error(`Error in complexityReportDirect: ${error.message}`);
+		return {
+			success: false,
+			error: {
+				code: 'UNEXPECTED_ERROR',
+				message: error.message
+			},
+			fromCache: false
+		};
+	}
 }

mcp-server/src/core/direct-functions/expand-all-tasks.js

@@ -3,8 +3,11 @@
  */
 
 import { expandAllTasks } from '../../../../scripts/modules/task-manager.js';
-import { enableSilentMode, disableSilentMode, isSilentMode } from '../../../../scripts/modules/utils.js';
-import { findTasksJsonPath } from '../utils/path-utils.js';
+import {
+	enableSilentMode,
+	disableSilentMode,
+	isSilentMode
+} from '../../../../scripts/modules/utils.js';
 import { getAnthropicClientForMCP } from '../utils/ai-client-utils.js';
 import path from 'path';
 import fs from 'fs';
@@ -12,109 +15,128 @@ import fs from 'fs';
 /**
  * Expand all pending tasks with subtasks
  * @param {Object} args - Function arguments
+ * @param {string} args.tasksJsonPath - Explicit path to the tasks.json file.
  * @param {number|string} [args.num] - Number of subtasks to generate
  * @param {boolean} [args.research] - Enable Perplexity AI for research-backed subtask generation
  * @param {string} [args.prompt] - Additional context to guide subtask generation
  * @param {boolean} [args.force] - Force regeneration of subtasks for tasks that already have them
- * @param {string} [args.file] - Path to the tasks file
- * @param {string} [args.projectRoot] - Project root directory
  * @param {Object} log - Logger object
  * @param {Object} context - Context object containing session
  * @returns {Promise<{success: boolean, data?: Object, error?: {code: string, message: string}}>}
  */
 export async function expandAllTasksDirect(args, log, context = {}) {
-  const { session } = context; // Only extract session, not reportProgress
+	const { session } = context; // Only extract session, not reportProgress
+	// Destructure expected args
+	const { tasksJsonPath, num, research, prompt, force } = args;
 
-  try {
-    log.info(`Expanding all tasks with args: ${JSON.stringify(args)}`);
+	try {
+		log.info(`Expanding all tasks with args: ${JSON.stringify(args)}`);
 
-    // Enable silent mode early to prevent any console output
-    enableSilentMode();
+		// Check if tasksJsonPath was provided
+		if (!tasksJsonPath) {
+			log.error('expandAllTasksDirect called without tasksJsonPath');
+			return {
+				success: false,
+				error: {
+					code: 'MISSING_ARGUMENT',
+					message: 'tasksJsonPath is required'
+				}
+			};
+		}
 
-    try {
-      // Find the tasks.json path
-      const tasksPath = findTasksJsonPath(args, log);
+		// Enable silent mode early to prevent any console output
+		enableSilentMode();
 
-      // Parse parameters
-      const numSubtasks = args.num ? parseInt(args.num, 10) : undefined;
-      const useResearch = args.research === true;
-      const additionalContext = args.prompt || '';
-      const forceFlag = args.force === true;
+		try {
+			// Remove internal path finding
+			/*
+			const tasksPath = findTasksJsonPath(args, log);
+			*/
+			// Use provided path
+			const tasksPath = tasksJsonPath;
 
-      log.info(`Expanding all tasks with ${numSubtasks || 'default'} subtasks each...`);
+			// Parse parameters
+			const numSubtasks = num ? parseInt(num, 10) : undefined;
+			const useResearch = research === true;
+			const additionalContext = prompt || '';
+			const forceFlag = force === true;
 
-      if (useResearch) {
-        log.info('Using Perplexity AI for research-backed subtask generation');
+			log.info(
+				`Expanding all tasks with ${numSubtasks || 'default'} subtasks each...`
+			);
 
-        // Initialize AI client for research-backed expansion
-        try {
-          await getAnthropicClientForMCP(session, log);
-        } catch (error) {
-          // Ensure silent mode is disabled before returning error
-          disableSilentMode();
+			if (useResearch) {
+				log.info('Using Perplexity AI for research-backed subtask generation');
 
-          log.error(`Failed to initialize AI client: ${error.message}`);
-          return {
-            success: false,
-            error: {
-              code: 'AI_CLIENT_ERROR',
-              message: `Cannot initialize AI client: ${error.message}`
-            }
-          };
-        }
-      }
+				// Initialize AI client for research-backed expansion
+				try {
+					await getAnthropicClientForMCP(session, log);
+				} catch (error) {
+					// Ensure silent mode is disabled before returning error
+					disableSilentMode();
 
-      if (additionalContext) {
-        log.info(`Additional context: "${additionalContext}"`);
-      }
-      if (forceFlag) {
-        log.info('Force regeneration of subtasks is enabled');
-      }
+					log.error(`Failed to initialize AI client: ${error.message}`);
+					return {
+						success: false,
+						error: {
+							code: 'AI_CLIENT_ERROR',
+							message: `Cannot initialize AI client: ${error.message}`
+						}
+					};
+				}
+			}
 
-      // Call the core function with session context for AI operations
-      // and outputFormat as 'json' to prevent UI elements
-      const result = await expandAllTasks(
-        tasksPath,
-        numSubtasks, 
-        useResearch, 
-        additionalContext, 
-        forceFlag, 
-        { mcpLog: log, session },
-        'json' // Use JSON output format to prevent UI elements
-      );
+			if (additionalContext) {
+				log.info(`Additional context: "${additionalContext}"`);
+			}
+			if (forceFlag) {
+				log.info('Force regeneration of subtasks is enabled');
+			}
 
-      // The expandAllTasks function now returns a result object
-      return {
-        success: true,
-        data: {
-          message: "Successfully expanded all pending tasks with subtasks",
-          details: {
-            numSubtasks: numSubtasks,
-            research: useResearch,
-            prompt: additionalContext,
-            force: forceFlag,
-            tasksExpanded: result.expandedCount,
-            totalEligibleTasks: result.tasksToExpand
-          }
-        }
-      };
-    } finally {
-      // Restore normal logging in finally block to ensure it runs even if there's an error
-      disableSilentMode();
-    }
-  } catch (error) {
-    // Ensure silent mode is disabled if an error occurs
-    if (isSilentMode()) {
-      disableSilentMode();
-    }
+			// Call the core function with session context for AI operations
+			// and outputFormat as 'json' to prevent UI elements
+			const result = await expandAllTasks(
+				tasksPath,
+				numSubtasks,
+				useResearch,
+				additionalContext,
+				forceFlag,
+				{ mcpLog: log, session },
+				'json' // Use JSON output format to prevent UI elements
+			);
 
-    log.error(`Error in expandAllTasksDirect: ${error.message}`);
-    return {
-      success: false,
-      error: {
-        code: 'CORE_FUNCTION_ERROR',
-        message: error.message
-      }
-    };
-  }
+			// The expandAllTasks function now returns a result object
+			return {
+				success: true,
+				data: {
+					message: 'Successfully expanded all pending tasks with subtasks',
+					details: {
+						numSubtasks: numSubtasks,
+						research: useResearch,
+						prompt: additionalContext,
+						force: forceFlag,
+						tasksExpanded: result.expandedCount,
+						totalEligibleTasks: result.tasksToExpand
+					}
+				}
+			};
+		} finally {
+			// Restore normal logging in finally block to ensure it runs even if there's an error
+			disableSilentMode();
+		}
+	} catch (error) {
+		// Ensure silent mode is disabled if an error occurs
+		if (isSilentMode()) {
+			disableSilentMode();
+		}
+
+		log.error(`Error in expandAllTasksDirect: ${error.message}`);
+		return {
+			success: false,
+			error: {
+				code: 'CORE_FUNCTION_ERROR',
+				message: error.message
+			}
+		};
+	}
 }

mcp-server/src/core/direct-functions/expand-task.js

@@ -4,9 +4,17 @@
  */
 
 import { expandTask } from '../../../../scripts/modules/task-manager.js';
-import { readJSON, writeJSON, enableSilentMode, disableSilentMode, isSilentMode } from '../../../../scripts/modules/utils.js';
-import { findTasksJsonPath } from '../utils/path-utils.js';
-import { getAnthropicClientForMCP, getModelConfig } from '../utils/ai-client-utils.js';
+import {
+	readJSON,
+	writeJSON,
+	enableSilentMode,
+	disableSilentMode,
+	isSilentMode
+} from '../../../../scripts/modules/utils.js';
+import {
+	getAnthropicClientForMCP,
+	getModelConfig
+} from '../utils/ai-client-utils.js';
 import path from 'path';
 import fs from 'fs';
 
@@ -14,236 +22,249 @@ import fs from 'fs';
  * Direct function wrapper for expanding a task into subtasks with error handling.
  *
  * @param {Object} args - Command arguments
+ * @param {string} args.tasksJsonPath - Explicit path to the tasks.json file.
+ * @param {string} args.id - The ID of the task to expand.
+ * @param {number|string} [args.num] - Number of subtasks to generate.
+ * @param {boolean} [args.research] - Enable Perplexity AI for research-backed subtask generation.
+ * @param {string} [args.prompt] - Additional context to guide subtask generation.
+ * @param {boolean} [args.force] - Force expansion even if subtasks exist.
  * @param {Object} log - Logger object
  * @param {Object} context - Context object containing session and reportProgress
  * @returns {Promise<Object>} - Task expansion result { success: boolean, data?: any, error?: { code: string, message: string }, fromCache: boolean }
  */
 export async function expandTaskDirect(args, log, context = {}) {
-  const { session } = context;
+	const { session } = context;
+	// Destructure expected args
+	const { tasksJsonPath, id, num, research, prompt, force } = args;
 
-  // Log session root data for debugging
-  log.info(`Session data in expandTaskDirect: ${JSON.stringify({
-    hasSession: !!session,
-    sessionKeys: session ? Object.keys(session) : [],
-    roots: session?.roots,
-    rootsStr: JSON.stringify(session?.roots)
-  })}`);
+	// Log session root data for debugging
+	log.info(
+		`Session data in expandTaskDirect: ${JSON.stringify({
+			hasSession: !!session,
+			sessionKeys: session ? Object.keys(session) : [],
+			roots: session?.roots,
+			rootsStr: JSON.stringify(session?.roots)
+		})}`
+	);
 
-  let tasksPath;
-  try {
-    // If a direct file path is provided, use it directly
-    if (args.file && fs.existsSync(args.file)) {
-      log.info(`[expandTaskDirect] Using explicitly provided tasks file: ${args.file}`);
-      tasksPath = args.file;
-    } else {
-      // Find the tasks path through standard logic
-      log.info(`[expandTaskDirect] No direct file path provided or file not found at ${args.file}, searching using findTasksJsonPath`);
-      tasksPath = findTasksJsonPath(args, log);
-    }
-  } catch (error) {
-    log.error(`[expandTaskDirect] Error during tasksPath determination: ${error.message}`);
+	// Check if tasksJsonPath was provided
+	if (!tasksJsonPath) {
+		log.error('expandTaskDirect called without tasksJsonPath');
+		return {
+			success: false,
+			error: {
+				code: 'MISSING_ARGUMENT',
+				message: 'tasksJsonPath is required'
+			},
+			fromCache: false
+		};
+	}
 
-    // Include session roots information in error
-    const sessionRootsInfo = session ? 
-      `\nSession.roots: ${JSON.stringify(session.roots)}\n` +
-      `Current Working Directory: ${process.cwd()}\n` +
-      `Args.projectRoot: ${args.projectRoot}\n` +
-      `Args.file: ${args.file}\n` : 
-      '\nSession object not available';
+	// Use provided path
+	const tasksPath = tasksJsonPath;
 
-    return { 
-      success: false, 
-      error: { 
-        code: 'FILE_NOT_FOUND_ERROR', 
-        message: `Error determining tasksPath: ${error.message}${sessionRootsInfo}` 
-      }, 
-      fromCache: false 
-    };
-  }
+	log.info(`[expandTaskDirect] Using tasksPath: ${tasksPath}`);
 
-  log.info(`[expandTaskDirect] Determined tasksPath: ${tasksPath}`);
+	// Validate task ID
+	const taskId = id ? parseInt(id, 10) : null;
+	if (!taskId) {
+		log.error('Task ID is required');
+		return {
+			success: false,
+			error: {
+				code: 'INPUT_VALIDATION_ERROR',
+				message: 'Task ID is required'
+			},
+			fromCache: false
+		};
+	}
 
-  // Validate task ID
-  const taskId = args.id ? parseInt(args.id, 10) : null;
-  if (!taskId) {
-    log.error('Task ID is required');
-    return { 
-      success: false, 
-      error: { 
-        code: 'INPUT_VALIDATION_ERROR', 
-        message: 'Task ID is required' 
-      }, 
-      fromCache: false 
-    };
-  }
+	// Process other parameters
+	const numSubtasks = num ? parseInt(num, 10) : undefined;
+	const useResearch = research === true;
+	const additionalContext = prompt || '';
+	const forceFlag = force === true;
 
-  // Process other parameters
-  const numSubtasks = args.num ? parseInt(args.num, 10) : undefined;
-  const useResearch = args.research === true;
-  const additionalContext = args.prompt || '';
+	// Initialize AI client if needed (for expandTask function)
+	try {
+		// This ensures the AI client is available by checking it
+		if (useResearch) {
+			log.info('Verifying AI client for research-backed expansion');
+			await getAnthropicClientForMCP(session, log);
+		}
+	} catch (error) {
+		log.error(`Failed to initialize AI client: ${error.message}`);
+		return {
+			success: false,
+			error: {
+				code: 'AI_CLIENT_ERROR',
+				message: `Cannot initialize AI client: ${error.message}`
+			},
+			fromCache: false
+		};
+	}
 
-  // Initialize AI client if needed (for expandTask function)
-  try {
-    // This ensures the AI client is available by checking it
-    if (useResearch) {
-      log.info('Verifying AI client for research-backed expansion');
-      await getAnthropicClientForMCP(session, log);
-    }
-  } catch (error) {
-    log.error(`Failed to initialize AI client: ${error.message}`);
-    return {
-      success: false,
-      error: {
-        code: 'AI_CLIENT_ERROR',
-        message: `Cannot initialize AI client: ${error.message}`
-      },
-      fromCache: false
-    };
-  }
+	try {
+		log.info(
+			`[expandTaskDirect] Expanding task ${taskId} into ${numSubtasks || 'default'} subtasks. Research: ${useResearch}`
+		);
 
-  try {
-    log.info(`[expandTaskDirect] Expanding task ${taskId} into ${numSubtasks || 'default'} subtasks. Research: ${useResearch}`);
+		// Read tasks data
+		log.info(`[expandTaskDirect] Attempting to read JSON from: ${tasksPath}`);
+		const data = readJSON(tasksPath);
+		log.info(
+			`[expandTaskDirect] Result of readJSON: ${data ? 'Data read successfully' : 'readJSON returned null or undefined'}`
+		);
 
-    // Read tasks data
-    log.info(`[expandTaskDirect] Attempting to read JSON from: ${tasksPath}`);
-    const data = readJSON(tasksPath);
-    log.info(`[expandTaskDirect] Result of readJSON: ${data ? 'Data read successfully' : 'readJSON returned null or undefined'}`);
+		if (!data || !data.tasks) {
+			log.error(
+				`[expandTaskDirect] readJSON failed or returned invalid data for path: ${tasksPath}`
+			);
+			return {
+				success: false,
+				error: {
+					code: 'INVALID_TASKS_FILE',
+					message: `No valid tasks found in ${tasksPath}. readJSON returned: ${JSON.stringify(data)}`
+				},
+				fromCache: false
+			};
+		}
 
-    if (!data || !data.tasks) {
-      log.error(`[expandTaskDirect] readJSON failed or returned invalid data for path: ${tasksPath}`);
-      return {
-        success: false,
-        error: {
-          code: 'INVALID_TASKS_FILE',
-          message: `No valid tasks found in ${tasksPath}. readJSON returned: ${JSON.stringify(data)}`
-        },
-        fromCache: false
-      };
-    }
+		// Find the specific task
+		log.info(`[expandTaskDirect] Searching for task ID ${taskId} in data`);
+		const task = data.tasks.find((t) => t.id === taskId);
+		log.info(`[expandTaskDirect] Task found: ${task ? 'Yes' : 'No'}`);
 
-    // Find the specific task
-    log.info(`[expandTaskDirect] Searching for task ID ${taskId} in data`);
-    const task = data.tasks.find(t => t.id === taskId);
-    log.info(`[expandTaskDirect] Task found: ${task ? 'Yes' : 'No'}`);
+		if (!task) {
+			return {
+				success: false,
+				error: {
+					code: 'TASK_NOT_FOUND',
+					message: `Task with ID ${taskId} not found`
+				},
+				fromCache: false
+			};
+		}
 
-    if (!task) {
-      return { 
-        success: false, 
-        error: { 
-          code: 'TASK_NOT_FOUND', 
-          message: `Task with ID ${taskId} not found` 
-        }, 
-        fromCache: false
-      };
-    }
+		// Check if task is completed
+		if (task.status === 'done' || task.status === 'completed') {
+			return {
+				success: false,
+				error: {
+					code: 'TASK_COMPLETED',
+					message: `Task ${taskId} is already marked as ${task.status} and cannot be expanded`
+				},
+				fromCache: false
+			};
+		}
 
-    // Check if task is completed
-    if (task.status === 'done' || task.status === 'completed') {
-      return { 
-        success: false, 
-        error: { 
-          code: 'TASK_COMPLETED', 
-          message: `Task ${taskId} is already marked as ${task.status} and cannot be expanded` 
-        }, 
-        fromCache: false
-      };
-    }
+		// Check for existing subtasks and force flag
+		const hasExistingSubtasks = task.subtasks && task.subtasks.length > 0;
+		if (hasExistingSubtasks && !forceFlag) {
+			log.info(
+				`Task ${taskId} already has ${task.subtasks.length} subtasks. Use --force to overwrite.`
+			);
+			return {
+				success: true,
+				data: {
+					message: `Task ${taskId} already has subtasks. Expansion skipped.`,
+					task,
+					subtasksAdded: 0,
+					hasExistingSubtasks
+				},
+				fromCache: false
+			};
+		}
 
-    // Check for existing subtasks
-    const hasExistingSubtasks = task.subtasks && task.subtasks.length > 0;
+		// If force flag is set, clear existing subtasks
+		if (hasExistingSubtasks && forceFlag) {
+			log.info(
+				`Force flag set. Clearing existing subtasks for task ${taskId}.`
+			);
+			task.subtasks = [];
+		}
 
-    // If the task already has subtasks, just return it (matching core behavior)
-    if (hasExistingSubtasks) {
-      log.info(`Task ${taskId} already has ${task.subtasks.length} subtasks`);
-      return { 
-        success: true, 
-        data: { 
-          task,
-          subtasksAdded: 0,
-          hasExistingSubtasks
-        }, 
-        fromCache: false 
-      };
-    }
+		// Keep a copy of the task before modification
+		const originalTask = JSON.parse(JSON.stringify(task));
 
-    // Keep a copy of the task before modification
-    const originalTask = JSON.parse(JSON.stringify(task));
+		// Tracking subtasks count before expansion
+		const subtasksCountBefore = task.subtasks ? task.subtasks.length : 0;
 
-    // Tracking subtasks count before expansion
-    const subtasksCountBefore = task.subtasks ? task.subtasks.length : 0;
+		// Create a backup of the tasks.json file
+		const backupPath = path.join(path.dirname(tasksPath), 'tasks.json.bak');
+		fs.copyFileSync(tasksPath, backupPath);
 
-    // Create a backup of the tasks.json file
-    const backupPath = path.join(path.dirname(tasksPath), 'tasks.json.bak');
-    fs.copyFileSync(tasksPath, backupPath);
+		// Directly modify the data instead of calling the CLI function
+		if (!task.subtasks) {
+			task.subtasks = [];
+		}
 
-    // Directly modify the data instead of calling the CLI function
-    if (!task.subtasks) {
-      task.subtasks = [];
-    }
+		// Save tasks.json with potentially empty subtasks array
+		writeJSON(tasksPath, data);
 
-    // Save tasks.json with potentially empty subtasks array
-    writeJSON(tasksPath, data);
+		// Process the request
+		try {
+			// Enable silent mode to prevent console logs from interfering with JSON response
+			enableSilentMode();
 
-    // Process the request
-    try {
-      // Enable silent mode to prevent console logs from interfering with JSON response
-      enableSilentMode();
+			// Call expandTask with session context to ensure AI client is properly initialized
+			const result = await expandTask(
+				tasksPath,
+				taskId,
+				numSubtasks,
+				useResearch,
+				additionalContext,
+				{ mcpLog: log, session } // Only pass mcpLog and session, NOT reportProgress
+			);
 
-      // Call expandTask with session context to ensure AI client is properly initialized
-      const result = await expandTask(
-        tasksPath,
-        taskId, 
-        numSubtasks, 
-        useResearch, 
-        additionalContext, 
-        { mcpLog: log, session } // Only pass mcpLog and session, NOT reportProgress
-      );
+			// Restore normal logging
+			disableSilentMode();
 
-      // Restore normal logging
-      disableSilentMode();
+			// Read the updated data
+			const updatedData = readJSON(tasksPath);
+			const updatedTask = updatedData.tasks.find((t) => t.id === taskId);
 
-      // Read the updated data
-      const updatedData = readJSON(tasksPath);
-      const updatedTask = updatedData.tasks.find(t => t.id === taskId);
+			// Calculate how many subtasks were added
+			const subtasksAdded = updatedTask.subtasks
+				? updatedTask.subtasks.length - subtasksCountBefore
+				: 0;
 
-      // Calculate how many subtasks were added
-      const subtasksAdded = updatedTask.subtasks ? 
-        updatedTask.subtasks.length - subtasksCountBefore : 0;
+			// Return the result
+			log.info(
+				`Successfully expanded task ${taskId} with ${subtasksAdded} new subtasks`
+			);
+			return {
+				success: true,
+				data: {
+					task: updatedTask,
+					subtasksAdded,
+					hasExistingSubtasks
+				},
+				fromCache: false
+			};
+		} catch (error) {
+			// Make sure to restore normal logging even if there's an error
+			disableSilentMode();
 
-      // Return the result
-      log.info(`Successfully expanded task ${taskId} with ${subtasksAdded} new subtasks`);
-      return { 
-        success: true, 
-        data: { 
-          task: updatedTask,
-          subtasksAdded,
-          hasExistingSubtasks
-        }, 
-        fromCache: false 
-      };
-    } catch (error) {
-      // Make sure to restore normal logging even if there's an error
-      disableSilentMode();
-      
-      log.error(`Error expanding task: ${error.message}`);
-      return { 
-        success: false, 
-        error: { 
-          code: 'CORE_FUNCTION_ERROR', 
-          message: error.message || 'Failed to expand task' 
-        }, 
-        fromCache: false 
-      };
-    }
-  } catch (error) {
-    log.error(`Error expanding task: ${error.message}`);
-    return { 
-      success: false, 
-      error: { 
-        code: 'CORE_FUNCTION_ERROR', 
-        message: error.message || 'Failed to expand task' 
-      }, 
-      fromCache: false 
-    };
-  }
+			log.error(`Error expanding task: ${error.message}`);
+			return {
+				success: false,
+				error: {
+					code: 'CORE_FUNCTION_ERROR',
+					message: error.message || 'Failed to expand task'
+				},
+				fromCache: false
+			};
+		}
+	} catch (error) {
+		log.error(`Error expanding task: ${error.message}`);
+		return {
+			success: false,
+			error: {
+				code: 'CORE_FUNCTION_ERROR',
+				message: error.message || 'Failed to expand task'
+			},
+			fromCache: false
+		};
+	}
 }

mcp-server/src/core/direct-functions/fix-dependencies.js

@@ -3,63 +3,78 @@
  */
 
 import { fixDependenciesCommand } from '../../../../scripts/modules/dependency-manager.js';
-import { findTasksJsonPath } from '../utils/path-utils.js';
-import { enableSilentMode, disableSilentMode } from '../../../../scripts/modules/utils.js';
+import {
+	enableSilentMode,
+	disableSilentMode
+} from '../../../../scripts/modules/utils.js';
 import fs from 'fs';
 
 /**
  * Fix invalid dependencies in tasks.json automatically
  * @param {Object} args - Function arguments
- * @param {string} [args.file] - Path to the tasks file
- * @param {string} [args.projectRoot] - Project root directory
+ * @param {string} args.tasksJsonPath - Explicit path to the tasks.json file.
  * @param {Object} log - Logger object
  * @returns {Promise<{success: boolean, data?: Object, error?: {code: string, message: string}}>}
  */
 export async function fixDependenciesDirect(args, log) {
-  try {
-    log.info(`Fixing invalid dependencies in tasks...`);
+	// Destructure expected args
+	const { tasksJsonPath } = args;
+	try {
+		log.info(`Fixing invalid dependencies in tasks: ${tasksJsonPath}`);
 
-    // Find the tasks.json path
-    const tasksPath = findTasksJsonPath(args, log);
+		// Check if tasksJsonPath was provided
+		if (!tasksJsonPath) {
+			log.error('fixDependenciesDirect called without tasksJsonPath');
+			return {
+				success: false,
+				error: {
+					code: 'MISSING_ARGUMENT',
+					message: 'tasksJsonPath is required'
+				}
+			};
+		}
 
-    // Verify the file exists
-    if (!fs.existsSync(tasksPath)) {
-      return {
-        success: false,
-        error: {
-          code: 'FILE_NOT_FOUND',
-          message: `Tasks file not found at ${tasksPath}`
-        }
-      };
-    }
+		// Use provided path
+		const tasksPath = tasksJsonPath;
 
-    // Enable silent mode to prevent console logs from interfering with JSON response
-    enableSilentMode();
+		// Verify the file exists
+		if (!fs.existsSync(tasksPath)) {
+			return {
+				success: false,
+				error: {
+					code: 'FILE_NOT_FOUND',
+					message: `Tasks file not found at ${tasksPath}`
+				}
+			};
+		}
 
-    // Call the original command function
-    await fixDependenciesCommand(tasksPath);
+		// Enable silent mode to prevent console logs from interfering with JSON response
+		enableSilentMode();
 
-    // Restore normal logging
-    disableSilentMode();
+		// Call the original command function using the provided path
+		await fixDependenciesCommand(tasksPath);
 
-    return {
-      success: true,
-      data: {
-        message: 'Dependencies fixed successfully',
-        tasksPath
-      }
-    };
-  } catch (error) {
-    // Make sure to restore normal logging even if there's an error
-    disableSilentMode();
+		// Restore normal logging
+		disableSilentMode();
 
-    log.error(`Error fixing dependencies: ${error.message}`);
-    return {
-      success: false,
-      error: {
-        code: 'FIX_DEPENDENCIES_ERROR',
-        message: error.message
-      }
-    };
-  }
+		return {
+			success: true,
+			data: {
+				message: 'Dependencies fixed successfully',
+				tasksPath
+			}
+		};
+	} catch (error) {
+		// Make sure to restore normal logging even if there's an error
+		disableSilentMode();
+
+		log.error(`Error fixing dependencies: ${error.message}`);
+		return {
+			success: false,
+			error: {
+				code: 'FIX_DEPENDENCIES_ERROR',
+				message: error.message
+			}
+		};
+	}
 }

mcp-server/src/core/direct-functions/generate-task-files.js

@@ -4,84 +4,97 @@
  */
 
 import { generateTaskFiles } from '../../../../scripts/modules/task-manager.js';
-import { enableSilentMode, disableSilentMode } from '../../../../scripts/modules/utils.js';
-import { findTasksJsonPath } from '../utils/path-utils.js';
+import {
+	enableSilentMode,
+	disableSilentMode
+} from '../../../../scripts/modules/utils.js';
 import path from 'path';
 
 /**
  * Direct function wrapper for generateTaskFiles with error handling.
  *
- * @param {Object} args - Command arguments containing file and output path options.
+ * @param {Object} args - Command arguments containing tasksJsonPath and outputDir.
  * @param {Object} log - Logger object.
  * @returns {Promise<Object>} - Result object with success status and data/error information.
  */
 export async function generateTaskFilesDirect(args, log) {
-  try {
-    log.info(`Generating task files with args: ${JSON.stringify(args)}`);
+	// Destructure expected args
+	const { tasksJsonPath, outputDir } = args;
+	try {
+		log.info(`Generating task files with args: ${JSON.stringify(args)}`);
 
-    // Get tasks file path
-    let tasksPath;
-    try {
-      tasksPath = findTasksJsonPath(args, log);
-    } catch (error) {
-      log.error(`Error finding tasks file: ${error.message}`);
-      return { 
-        success: false, 
-        error: { code: 'TASKS_FILE_ERROR', message: error.message },
-        fromCache: false 
-      };
-    }
+		// Check if paths were provided
+		if (!tasksJsonPath) {
+			const errorMessage = 'tasksJsonPath is required but was not provided.';
+			log.error(errorMessage);
+			return {
+				success: false,
+				error: { code: 'MISSING_ARGUMENT', message: errorMessage },
+				fromCache: false
+			};
+		}
+		if (!outputDir) {
+			const errorMessage = 'outputDir is required but was not provided.';
+			log.error(errorMessage);
+			return {
+				success: false,
+				error: { code: 'MISSING_ARGUMENT', message: errorMessage },
+				fromCache: false
+			};
+		}
 
-    // Get output directory (defaults to the same directory as the tasks file)
-    let outputDir = args.output;
-    if (!outputDir) {
-      outputDir = path.dirname(tasksPath);
-    }
+		// Use the provided paths
+		const tasksPath = tasksJsonPath;
+		const resolvedOutputDir = outputDir;
 
-    log.info(`Generating task files from ${tasksPath} to ${outputDir}`);
+		log.info(`Generating task files from ${tasksPath} to ${resolvedOutputDir}`);
 
-    // Execute core generateTaskFiles function in a separate try/catch
-    try {
-      // Enable silent mode to prevent logs from being written to stdout
-      enableSilentMode();
+		// Execute core generateTaskFiles function in a separate try/catch
+		try {
+			// Enable silent mode to prevent logs from being written to stdout
+			enableSilentMode();
 
-      // The function is synchronous despite being awaited elsewhere
-      generateTaskFiles(tasksPath, outputDir);
+			// The function is synchronous despite being awaited elsewhere
+			generateTaskFiles(tasksPath, resolvedOutputDir);
 
-      // Restore normal logging after task generation
-      disableSilentMode();
-    } catch (genError) {
-      // Make sure to restore normal logging even if there's an error
-      disableSilentMode();
+			// Restore normal logging after task generation
+			disableSilentMode();
+		} catch (genError) {
+			// Make sure to restore normal logging even if there's an error
+			disableSilentMode();
 
-      log.error(`Error in generateTaskFiles: ${genError.message}`);
-      return { 
-        success: false, 
-        error: { code: 'GENERATE_FILES_ERROR', message: genError.message },
-        fromCache: false 
-      };
-    }
+			log.error(`Error in generateTaskFiles: ${genError.message}`);
+			return {
+				success: false,
+				error: { code: 'GENERATE_FILES_ERROR', message: genError.message },
+				fromCache: false
+			};
+		}
 
-    // Return success with file paths
-    return {
-      success: true,
-      data: {
-        message: `Successfully generated task files`,
-        tasksPath,
-        outputDir,
-        taskFiles: 'Individual task files have been generated in the output directory'
-      },
-      fromCache: false // This operation always modifies state and should never be cached
-    };
-  } catch (error) {
-    // Make sure to restore normal logging if an outer error occurs
-    disableSilentMode();
+		// Return success with file paths
+		return {
+			success: true,
+			data: {
+				message: `Successfully generated task files`,
+				tasksPath: tasksPath,
+				outputDir: resolvedOutputDir,
+				taskFiles:
+					'Individual task files have been generated in the output directory'
+			},
+			fromCache: false // This operation always modifies state and should never be cached
+		};
+	} catch (error) {
+		// Make sure to restore normal logging if an outer error occurs
+		disableSilentMode();
 
-    log.error(`Error generating task files: ${error.message}`);
-    return { 
-      success: false, 
-      error: { code: 'GENERATE_TASKS_ERROR', message: error.message || 'Unknown error generating task files' },
-      fromCache: false 
-    };
-  }
+		log.error(`Error generating task files: ${error.message}`);
+		return {
+			success: false,
+			error: {
+				code: 'GENERATE_TASKS_ERROR',
+				message: error.message || 'Unknown error generating task files'
+			},
+			fromCache: false
+		};
+	}
 }

mcp-server/src/core/direct-functions/initialize-project-direct.js

@@ -0,0 +1,138 @@
+import { initializeProject } from '../../../../scripts/init.js'; // Import core function and its logger if needed separately
+import {
+	enableSilentMode,
+	disableSilentMode
+	// isSilentMode // Not used directly here
+} from '../../../../scripts/modules/utils.js';
+import { getProjectRootFromSession } from '../../tools/utils.js'; // Adjust path if necessary
+import os from 'os'; // Import os module for home directory check
+
+/**
+ * Direct function wrapper for initializing a project.
+ * Derives target directory from session, sets CWD, and calls core init logic.
+ * @param {object} args - Arguments containing project details and options (projectName, projectDescription, yes, etc.)
+ * @param {object} log - The FastMCP logger instance.
+ * @param {object} context - The context object, must contain { session }.
+ * @returns {Promise<{success: boolean, data?: any, error?: {code: string, message: string}}>} - Standard result object.
+ */
+export async function initializeProjectDirect(args, log, context = {}) {
+	const { session } = context;
+	const homeDir = os.homedir();
+	let targetDirectory = null;
+
+	log.info(
+		`CONTEXT received in direct function: ${context ? JSON.stringify(Object.keys(context)) : 'MISSING or Falsy'}`
+	);
+	log.info(
+		`SESSION extracted in direct function: ${session ? 'Exists' : 'MISSING or Falsy'}`
+	);
+	log.info(`Args received in direct function: ${JSON.stringify(args)}`);
+
+	// --- Determine Target Directory ---
+	// 1. Prioritize projectRoot passed directly in args
+	// Ensure it's not null, '/', or the home directory
+	if (
+		args.projectRoot &&
+		args.projectRoot !== '/' &&
+		args.projectRoot !== homeDir
+	) {
+		log.info(`Using projectRoot directly from args: ${args.projectRoot}`);
+		targetDirectory = args.projectRoot;
+	} else {
+		// 2. If args.projectRoot is missing or invalid, THEN try session (as a fallback)
+		log.warn(
+			`args.projectRoot ('${args.projectRoot}') is missing or invalid. Attempting to derive from session.`
+		);
+		const sessionDerivedPath = getProjectRootFromSession(session, log);
+		// Validate the session-derived path as well
+		if (
+			sessionDerivedPath &&
+			sessionDerivedPath !== '/' &&
+			sessionDerivedPath !== homeDir
+		) {
+			log.info(
+				`Using project root derived from session: ${sessionDerivedPath}`
+			);
+			targetDirectory = sessionDerivedPath;
+		} else {
+			log.error(
+				`Could not determine a valid project root. args.projectRoot='${args.projectRoot}', sessionDerivedPath='${sessionDerivedPath}'`
+			);
+		}
+	}
+
+	// 3. Validate the final targetDirectory
+	if (!targetDirectory) {
+		// This error now covers cases where neither args.projectRoot nor session provided a valid path
+		return {
+			success: false,
+			error: {
+				code: 'INVALID_TARGET_DIRECTORY',
+				message: `Cannot initialize project: Could not determine a valid target directory. Please ensure a workspace/folder is open or specify projectRoot.`,
+				details: `Attempted args.projectRoot: ${args.projectRoot}`
+			},
+			fromCache: false
+		};
+	}
+
+	// --- Proceed with validated targetDirectory ---
+	log.info(`Validated target directory for initialization: ${targetDirectory}`);
+
+	const originalCwd = process.cwd();
+	let resultData;
+	let success = false;
+	let errorResult = null;
+
+	log.info(
+		`Temporarily changing CWD to ${targetDirectory} for initialization.`
+	);
+	process.chdir(targetDirectory); // Change CWD to the *validated* targetDirectory
+
+	enableSilentMode(); // Enable silent mode BEFORE calling the core function
+	try {
+		// Always force yes: true when called via MCP to avoid interactive prompts
+		const options = {
+			name: args.projectName,
+			description: args.projectDescription,
+			version: args.projectVersion,
+			author: args.authorName,
+			skipInstall: args.skipInstall,
+			aliases: args.addAliases,
+			yes: true // Force yes mode
+		};
+
+		log.info(`Initializing project with options: ${JSON.stringify(options)}`);
+		const result = await initializeProject(options); // Call core logic
+
+		// Format success result for handleApiResult
+		resultData = {
+			message: 'Project initialized successfully.',
+			next_step:
+				'Now that the project is initialized, the next step is to create the tasks by parsing a PRD. This will create the tasks folder and the initial task files (tasks folder will be created when parse-prd is run). The parse-prd tool will require a prd.txt file as input (typically found in the project root directory, scripts/ directory). You can create a prd.txt file by asking the user about their idea, and then using the scripts/example_prd.txt file as a template to genrate a prd.txt file in scripts/. You may skip all of this if the user already has a prd.txt file. You can THEN use the parse-prd tool to create the tasks. So: step 1 after initialization is to create a prd.txt file in scripts/prd.txt or confirm the user already has one. Step 2 is to use the parse-prd tool to create the tasks. Do not bother looking for tasks after initialization, just use the parse-prd tool to create the tasks after creating a prd.txt from which to parse the tasks. You do NOT need to reinitialize the project to parse-prd.',
+			...result // Include details returned by initializeProject
+		};
+		success = true;
+		log.info(
+			`Project initialization completed successfully in ${targetDirectory}.`
+		);
+	} catch (error) {
+		log.error(`Core initializeProject failed: ${error.message}`);
+		errorResult = {
+			code: 'INITIALIZATION_FAILED',
+			message: `Core project initialization failed: ${error.message}`,
+			details: error.stack
+		};
+		success = false;
+	} finally {
+		disableSilentMode(); // ALWAYS disable silent mode in finally
+		log.info(`Restoring original CWD: ${originalCwd}`);
+		process.chdir(originalCwd); // Change back to original CWD
+	}
+
+	// Return in format expected by handleApiResult
+	if (success) {
+		return { success: true, data: resultData, fromCache: false };
+	} else {
+		return { success: false, error: errorResult, fromCache: false };
+	}
+}

mcp-server/src/core/direct-functions/list-tasks.js

@@ -5,79 +5,108 @@
 
 import { listTasks } from '../../../../scripts/modules/task-manager.js';
 import { getCachedOrExecute } from '../../tools/utils.js';
-import { findTasksJsonPath } from '../utils/path-utils.js';
-import { enableSilentMode, disableSilentMode } from '../../../../scripts/modules/utils.js';
+import {
+	enableSilentMode,
+	disableSilentMode
+} from '../../../../scripts/modules/utils.js';
 
 /**
  * Direct function wrapper for listTasks with error handling and caching.
  *
- * @param {Object} args - Command arguments (projectRoot is expected to be resolved).
+ * @param {Object} args - Command arguments (now expecting tasksJsonPath explicitly).
  * @param {Object} log - Logger object.
  * @returns {Promise<Object>} - Task list result { success: boolean, data?: any, error?: { code: string, message: string }, fromCache: boolean }.
  */
 export async function listTasksDirect(args, log) {
-  let tasksPath;
-  try {
-    // Find the tasks path first - needed for cache key and execution
-    tasksPath = findTasksJsonPath(args, log);
-  } catch (error) {
-    if (error.code === 'TASKS_FILE_NOT_FOUND') {
-      log.error(`Tasks file not found: ${error.message}`);
-      // Return the error structure expected by the calling tool/handler
-      return { success: false, error: { code: error.code, message: error.message }, fromCache: false };
-    }
-    log.error(`Unexpected error finding tasks file: ${error.message}`);
-    // Re-throw for outer catch or return structured error
-     return { success: false, error: { code: 'FIND_TASKS_PATH_ERROR', message: error.message }, fromCache: false };
-  }
+	// Destructure the explicit tasksJsonPath from args
+	const { tasksJsonPath, status, withSubtasks } = args;
 
-  // Generate cache key *after* finding tasksPath
-  const statusFilter = args.status || 'all';
-  const withSubtasks = args.withSubtasks || false;
-  const cacheKey = `listTasks:${tasksPath}:${statusFilter}:${withSubtasks}`;
+	if (!tasksJsonPath) {
+		log.error('listTasksDirect called without tasksJsonPath');
+		return {
+			success: false,
+			error: {
+				code: 'MISSING_ARGUMENT',
+				message: 'tasksJsonPath is required'
+			},
+			fromCache: false
+		};
+	}
 
-  // Define the action function to be executed on cache miss
-  const coreListTasksAction = async () => {
-    try {
-      // Enable silent mode to prevent console logs from interfering with JSON response
-      enableSilentMode();
+	// Use the explicit tasksJsonPath for cache key
+	const statusFilter = status || 'all';
+	const withSubtasksFilter = withSubtasks || false;
+	const cacheKey = `listTasks:${tasksJsonPath}:${statusFilter}:${withSubtasksFilter}`;
 
-      log.info(`Executing core listTasks function for path: ${tasksPath}, filter: ${statusFilter}, subtasks: ${withSubtasks}`);
-      const resultData = listTasks(tasksPath, statusFilter, withSubtasks, 'json');
+	// Define the action function to be executed on cache miss
+	const coreListTasksAction = async () => {
+		try {
+			// Enable silent mode to prevent console logs from interfering with JSON response
+			enableSilentMode();
 
-      if (!resultData || !resultData.tasks) {
-        log.error('Invalid or empty response from listTasks core function');
-        return { success: false, error: { code: 'INVALID_CORE_RESPONSE', message: 'Invalid or empty response from listTasks core function' } };
-      }
-      log.info(`Core listTasks function retrieved ${resultData.tasks.length} tasks`);
+			log.info(
+				`Executing core listTasks function for path: ${tasksJsonPath}, filter: ${statusFilter}, subtasks: ${withSubtasksFilter}`
+			);
+			// Pass the explicit tasksJsonPath to the core function
+			const resultData = listTasks(
+				tasksJsonPath,
+				statusFilter,
+				withSubtasksFilter,
+				'json'
+			);
 
-      // Restore normal logging
-      disableSilentMode();
+			if (!resultData || !resultData.tasks) {
+				log.error('Invalid or empty response from listTasks core function');
+				return {
+					success: false,
+					error: {
+						code: 'INVALID_CORE_RESPONSE',
+						message: 'Invalid or empty response from listTasks core function'
+					}
+				};
+			}
+			log.info(
+				`Core listTasks function retrieved ${resultData.tasks.length} tasks`
+			);
 
-      return { success: true, data: resultData };
+			// Restore normal logging
+			disableSilentMode();
 
-    } catch (error) {
-      // Make sure to restore normal logging even if there's an error
-      disableSilentMode();
+			return { success: true, data: resultData };
+		} catch (error) {
+			// Make sure to restore normal logging even if there's an error
+			disableSilentMode();
 
-      log.error(`Core listTasks function failed: ${error.message}`);
-      return { success: false, error: { code: 'LIST_TASKS_CORE_ERROR', message: error.message || 'Failed to list tasks' } };
-    }
-  };
+			log.error(`Core listTasks function failed: ${error.message}`);
+			return {
+				success: false,
+				error: {
+					code: 'LIST_TASKS_CORE_ERROR',
+					message: error.message || 'Failed to list tasks'
+				}
+			};
+		}
+	};
 
-  // Use the caching utility
-  try {
-      const result = await getCachedOrExecute({
-          cacheKey,
-          actionFn: coreListTasksAction,
-          log
-      });
-      log.info(`listTasksDirect completed. From cache: ${result.fromCache}`);
-      return result; // Returns { success, data/error, fromCache }
-  } catch(error) {
-      // Catch unexpected errors from getCachedOrExecute itself (though unlikely)
-      log.error(`Unexpected error during getCachedOrExecute for listTasks: ${error.message}`);
-      console.error(error.stack);
-      return { success: false, error: { code: 'CACHE_UTIL_ERROR', message: error.message }, fromCache: false };
-  }
+	// Use the caching utility
+	try {
+		const result = await getCachedOrExecute({
+			cacheKey,
+			actionFn: coreListTasksAction,
+			log
+		});
+		log.info(`listTasksDirect completed. From cache: ${result.fromCache}`);
+		return result; // Returns { success, data/error, fromCache }
+	} catch (error) {
+		// Catch unexpected errors from getCachedOrExecute itself (though unlikely)
+		log.error(
+			`Unexpected error during getCachedOrExecute for listTasks: ${error.message}`
+		);
+		console.error(error.stack);
+		return {
+			success: false,
+			error: { code: 'CACHE_UTIL_ERROR', message: error.message },
+			fromCache: false
+		};
+	}
 }

mcp-server/src/core/direct-functions/next-task.js

@@ -6,117 +6,127 @@
 import { findNextTask } from '../../../../scripts/modules/task-manager.js';
 import { readJSON } from '../../../../scripts/modules/utils.js';
 import { getCachedOrExecute } from '../../tools/utils.js';
-import { findTasksJsonPath } from '../utils/path-utils.js';
-import { enableSilentMode, disableSilentMode } from '../../../../scripts/modules/utils.js';
+import {
+	enableSilentMode,
+	disableSilentMode
+} from '../../../../scripts/modules/utils.js';
 
 /**
  * Direct function wrapper for finding the next task to work on with error handling and caching.
  *
  * @param {Object} args - Command arguments
+ * @param {string} args.tasksJsonPath - Explicit path to the tasks.json file.
  * @param {Object} log - Logger object
  * @returns {Promise<Object>} - Next task result { success: boolean, data?: any, error?: { code: string, message: string }, fromCache: boolean }
  */
 export async function nextTaskDirect(args, log) {
-  let tasksPath;
-  try {
-    // Find the tasks path first - needed for cache key and execution
-    tasksPath = findTasksJsonPath(args, log);
-  } catch (error) {
-    log.error(`Tasks file not found: ${error.message}`);
-    return { 
-      success: false, 
-      error: { 
-        code: 'FILE_NOT_FOUND_ERROR', 
-        message: error.message 
-      }, 
-      fromCache: false 
-    };
-  }
+	// Destructure expected args
+	const { tasksJsonPath } = args;
 
-  // Generate cache key using task path
-  const cacheKey = `nextTask:${tasksPath}`;
+	if (!tasksJsonPath) {
+		log.error('nextTaskDirect called without tasksJsonPath');
+		return {
+			success: false,
+			error: {
+				code: 'MISSING_ARGUMENT',
+				message: 'tasksJsonPath is required'
+			},
+			fromCache: false
+		};
+	}
 
-  // Define the action function to be executed on cache miss
-  const coreNextTaskAction = async () => {
-    try {
-      // Enable silent mode to prevent console logs from interfering with JSON response
-      enableSilentMode();
+	// Generate cache key using the provided task path
+	const cacheKey = `nextTask:${tasksJsonPath}`;
 
-      log.info(`Finding next task from ${tasksPath}`);
+	// Define the action function to be executed on cache miss
+	const coreNextTaskAction = async () => {
+		try {
+			// Enable silent mode to prevent console logs from interfering with JSON response
+			enableSilentMode();
 
-      // Read tasks data
-      const data = readJSON(tasksPath);
-      if (!data || !data.tasks) {
-        return { 
-          success: false, 
-          error: { 
-            code: 'INVALID_TASKS_FILE', 
-            message: `No valid tasks found in ${tasksPath}` 
-          } 
-        };
-      }
+			log.info(`Finding next task from ${tasksJsonPath}`);
 
-      // Find the next task
-      const nextTask = findNextTask(data.tasks);
+			// Read tasks data using the provided path
+			const data = readJSON(tasksJsonPath);
+			if (!data || !data.tasks) {
+				disableSilentMode(); // Disable before return
+				return {
+					success: false,
+					error: {
+						code: 'INVALID_TASKS_FILE',
+						message: `No valid tasks found in ${tasksJsonPath}`
+					}
+				};
+			}
 
-      if (!nextTask) {
-        log.info('No eligible next task found. All tasks are either completed or have unsatisfied dependencies');
-        return { 
-          success: true, 
-          data: { 
-            message: 'No eligible next task found. All tasks are either completed or have unsatisfied dependencies',
-            nextTask: null,
-            allTasks: data.tasks 
-          } 
-        };
-      }
+			// Find the next task
+			const nextTask = findNextTask(data.tasks);
 
-      // Restore normal logging
-      disableSilentMode();
+			if (!nextTask) {
+				log.info(
+					'No eligible next task found. All tasks are either completed or have unsatisfied dependencies'
+				);
+				return {
+					success: true,
+					data: {
+						message:
+							'No eligible next task found. All tasks are either completed or have unsatisfied dependencies',
+						nextTask: null,
+						allTasks: data.tasks
+					}
+				};
+			}
 
-      // Return the next task data with the full tasks array for reference
-      log.info(`Successfully found next task ${nextTask.id}: ${nextTask.title}`);
-      return { 
-        success: true, 
-        data: { 
-          nextTask, 
-          allTasks: data.tasks 
-        } 
-      };
-    } catch (error) {
-      // Make sure to restore normal logging even if there's an error
-      disableSilentMode();
+			// Restore normal logging
+			disableSilentMode();
 
-      log.error(`Error finding next task: ${error.message}`);
-      return { 
-        success: false, 
-        error: { 
-          code: 'CORE_FUNCTION_ERROR', 
-          message: error.message || 'Failed to find next task' 
-        } 
-      };
-    }
-  };
+			// Return the next task data with the full tasks array for reference
+			log.info(
+				`Successfully found next task ${nextTask.id}: ${nextTask.title}`
+			);
+			return {
+				success: true,
+				data: {
+					nextTask,
+					allTasks: data.tasks
+				}
+			};
+		} catch (error) {
+			// Make sure to restore normal logging even if there's an error
+			disableSilentMode();
 
-  // Use the caching utility
-  try {
-    const result = await getCachedOrExecute({
-      cacheKey,
-      actionFn: coreNextTaskAction,
-      log
-    });
-    log.info(`nextTaskDirect completed. From cache: ${result.fromCache}`);
-    return result; // Returns { success, data/error, fromCache }
-  } catch (error) {
-    // Catch unexpected errors from getCachedOrExecute itself
-    log.error(`Unexpected error during getCachedOrExecute for nextTask: ${error.message}`);
-    return { 
-      success: false, 
-      error: { 
-        code: 'UNEXPECTED_ERROR', 
-        message: error.message 
-      }, 
-      fromCache: false 
-    };
-  }
+			log.error(`Error finding next task: ${error.message}`);
+			return {
+				success: false,
+				error: {
+					code: 'CORE_FUNCTION_ERROR',
+					message: error.message || 'Failed to find next task'
+				}
+			};
+		}
+	};
+
+	// Use the caching utility
+	try {
+		const result = await getCachedOrExecute({
+			cacheKey,
+			actionFn: coreNextTaskAction,
+			log
+		});
+		log.info(`nextTaskDirect completed. From cache: ${result.fromCache}`);
+		return result; // Returns { success, data/error, fromCache }
+	} catch (error) {
+		// Catch unexpected errors from getCachedOrExecute itself
+		log.error(
+			`Unexpected error during getCachedOrExecute for nextTask: ${error.message}`
+		);
+		return {
+			success: false,
+			error: {
+				code: 'UNEXPECTED_ERROR',
+				message: error.message
+			},
+			fromCache: false
+		};
+	}
 }

mcp-server/src/core/direct-functions/parse-prd.js

@@ -5,10 +5,17 @@
 
 import path from 'path';
 import fs from 'fs';
+import os from 'os'; // Import os module for home directory check
 import { parsePRD } from '../../../../scripts/modules/task-manager.js';
 import { findTasksJsonPath } from '../utils/path-utils.js';
-import { enableSilentMode, disableSilentMode } from '../../../../scripts/modules/utils.js';
-import { getAnthropicClientForMCP, getModelConfig } from '../utils/ai-client-utils.js';
+import {
+	enableSilentMode,
+	disableSilentMode
+} from '../../../../scripts/modules/utils.js';
+import {
+	getAnthropicClientForMCP,
+	getModelConfig
+} from '../utils/ai-client-utils.js';
 
 /**
  * Direct function wrapper for parsing PRD documents and generating tasks.
@@ -19,132 +26,185 @@ import { getAnthropicClientForMCP, getModelConfig } from '../utils/ai-client-uti
  * @returns {Promise<Object>} - Result object with success status and data/error information.
  */
 export async function parsePRDDirect(args, log, context = {}) {
-  const { session } = context; // Only extract session, not reportProgress
+	const { session } = context; // Only extract session, not reportProgress
 
-  try {
-    log.info(`Parsing PRD document with args: ${JSON.stringify(args)}`);
+	try {
+		log.info(`Parsing PRD document with args: ${JSON.stringify(args)}`);
 
-    // Initialize AI client for PRD parsing
-    let aiClient;
-    try {
-      aiClient = getAnthropicClientForMCP(session, log);
-    } catch (error) {
-      log.error(`Failed to initialize AI client: ${error.message}`);
-      return {
-        success: false,
-        error: {
-          code: 'AI_CLIENT_ERROR',
-          message: `Cannot initialize AI client: ${error.message}`
-        },
-        fromCache: false
-      };
-    }
+		// Initialize AI client for PRD parsing
+		let aiClient;
+		try {
+			aiClient = getAnthropicClientForMCP(session, log);
+		} catch (error) {
+			log.error(`Failed to initialize AI client: ${error.message}`);
+			return {
+				success: false,
+				error: {
+					code: 'AI_CLIENT_ERROR',
+					message: `Cannot initialize AI client: ${error.message}`
+				},
+				fromCache: false
+			};
+		}
 
-    // Parameter validation and path resolution
-    if (!args.input) {
-      const errorMessage = 'No input file specified. Please provide an input PRD document path.';
-      log.error(errorMessage);
-      return { 
-        success: false, 
-        error: { code: 'MISSING_INPUT_FILE', message: errorMessage },
-        fromCache: false 
-      };
-    }
+		// Validate required parameters
+		if (!args.projectRoot) {
+			const errorMessage = 'Project root is required for parsePRDDirect';
+			log.error(errorMessage);
+			return {
+				success: false,
+				error: { code: 'MISSING_PROJECT_ROOT', message: errorMessage },
+				fromCache: false
+			};
+		}
 
-    // Resolve input path (relative to project root if provided)
-    const projectRoot = args.projectRoot || process.cwd();
-    const inputPath = path.isAbsolute(args.input) ? args.input : path.resolve(projectRoot, args.input);
+		if (!args.input) {
+			const errorMessage = 'Input file path is required for parsePRDDirect';
+			log.error(errorMessage);
+			return {
+				success: false,
+				error: { code: 'MISSING_INPUT_PATH', message: errorMessage },
+				fromCache: false
+			};
+		}
 
-    // Determine output path
-    let outputPath;
-    if (args.output) {
-      outputPath = path.isAbsolute(args.output) ? args.output : path.resolve(projectRoot, args.output);
-    } else {
-      // Default to tasks/tasks.json in the project root
-      outputPath = path.resolve(projectRoot, 'tasks', 'tasks.json');
-    }
+		if (!args.output) {
+			const errorMessage = 'Output file path is required for parsePRDDirect';
+			log.error(errorMessage);
+			return {
+				success: false,
+				error: { code: 'MISSING_OUTPUT_PATH', message: errorMessage },
+				fromCache: false
+			};
+		}
 
-    // Verify input file exists
-    if (!fs.existsSync(inputPath)) {
-      const errorMessage = `Input file not found: ${inputPath}`;
-      log.error(errorMessage);
-      return { 
-        success: false, 
-        error: { code: 'INPUT_FILE_NOT_FOUND', message: errorMessage },
-        fromCache: false 
-      };
-    }
+		// Resolve input path (expecting absolute path or path relative to project root)
+		const projectRoot = args.projectRoot;
+		const inputPath = path.isAbsolute(args.input)
+			? args.input
+			: path.resolve(projectRoot, args.input);
 
-    // Parse number of tasks - handle both string and number values
-    let numTasks = 10; // Default
-    if (args.numTasks) {
-      numTasks = typeof args.numTasks === 'string' ? parseInt(args.numTasks, 10) : args.numTasks;
-      if (isNaN(numTasks)) {
-        numTasks = 10; // Fallback to default if parsing fails
-        log.warn(`Invalid numTasks value: ${args.numTasks}. Using default: 10`);
-      }
-    }
+		// Verify input file exists
+		if (!fs.existsSync(inputPath)) {
+			const errorMessage = `Input file not found: ${inputPath}`;
+			log.error(errorMessage);
+			return {
+				success: false,
+				error: {
+					code: 'INPUT_FILE_NOT_FOUND',
+					message: errorMessage,
+					details: `Checked path: ${inputPath}\nProject root: ${projectRoot}\nInput argument: ${args.input}`
+				},
+				fromCache: false
+			};
+		}
 
-    log.info(`Preparing to parse PRD from ${inputPath} and output to ${outputPath} with ${numTasks} tasks`);
+		// Resolve output path (expecting absolute path or path relative to project root)
+		const outputPath = path.isAbsolute(args.output)
+			? args.output
+			: path.resolve(projectRoot, args.output);
 
-    // Create the logger wrapper for proper logging in the core function
-    const logWrapper = {
-      info: (message, ...args) => log.info(message, ...args),
-      warn: (message, ...args) => log.warn(message, ...args),
-      error: (message, ...args) => log.error(message, ...args),
-      debug: (message, ...args) => log.debug && log.debug(message, ...args),
-      success: (message, ...args) => log.info(message, ...args) // Map success to info
-    };
+		// Ensure output directory exists
+		const outputDir = path.dirname(outputPath);
+		if (!fs.existsSync(outputDir)) {
+			log.info(`Creating output directory: ${outputDir}`);
+			fs.mkdirSync(outputDir, { recursive: true });
+		}
 
-    // Get model config from session
-    const modelConfig = getModelConfig(session);
+		// Parse number of tasks - handle both string and number values
+		let numTasks = 10; // Default
+		if (args.numTasks) {
+			numTasks =
+				typeof args.numTasks === 'string'
+					? parseInt(args.numTasks, 10)
+					: args.numTasks;
+			if (isNaN(numTasks)) {
+				numTasks = 10; // Fallback to default if parsing fails
+				log.warn(`Invalid numTasks value: ${args.numTasks}. Using default: 10`);
+			}
+		}
 
-    // Enable silent mode to prevent console logs from interfering with JSON response
-    enableSilentMode();
-    try {
-      // Execute core parsePRD function with AI client
-      await parsePRD(inputPath, outputPath, numTasks, { 
-        mcpLog: logWrapper, 
-        session 
-      }, aiClient, modelConfig);
+		log.info(
+			`Preparing to parse PRD from ${inputPath} and output to ${outputPath} with ${numTasks} tasks`
+		);
 
-      // Since parsePRD doesn't return a value but writes to a file, we'll read the result
-      // to return it to the caller
-      if (fs.existsSync(outputPath)) {
-        const tasksData = JSON.parse(fs.readFileSync(outputPath, 'utf8'));
-        log.info(`Successfully parsed PRD and generated ${tasksData.tasks?.length || 0} tasks`);
+		// Create the logger wrapper for proper logging in the core function
+		const logWrapper = {
+			info: (message, ...args) => log.info(message, ...args),
+			warn: (message, ...args) => log.warn(message, ...args),
+			error: (message, ...args) => log.error(message, ...args),
+			debug: (message, ...args) => log.debug && log.debug(message, ...args),
+			success: (message, ...args) => log.info(message, ...args) // Map success to info
+		};
 
-        return {
-          success: true,
-          data: {
-            message: `Successfully generated ${tasksData.tasks?.length || 0} tasks from PRD`,
-            taskCount: tasksData.tasks?.length || 0,
-            outputPath
-          },
-          fromCache: false // This operation always modifies state and should never be cached
-        };
-      } else {
-        const errorMessage = `Tasks file was not created at ${outputPath}`;
-        log.error(errorMessage);
-        return { 
-          success: false, 
-          error: { code: 'OUTPUT_FILE_NOT_CREATED', message: errorMessage },
-          fromCache: false 
-        };
-      }
-    } finally {
-      // Always restore normal logging
-      disableSilentMode();
-    }
-  } catch (error) {
-    // Make sure to restore normal logging even if there's an error
-    disableSilentMode();
+		// Get model config from session
+		const modelConfig = getModelConfig(session);
 
-    log.error(`Error parsing PRD: ${error.message}`);
-    return { 
-      success: false, 
-      error: { code: 'PARSE_PRD_ERROR', message: error.message || 'Unknown error parsing PRD' },
-      fromCache: false 
-    };
-  }
+		// Enable silent mode to prevent console logs from interfering with JSON response
+		enableSilentMode();
+		try {
+			// Make sure the output directory exists
+			const outputDir = path.dirname(outputPath);
+			if (!fs.existsSync(outputDir)) {
+				log.info(`Creating output directory: ${outputDir}`);
+				fs.mkdirSync(outputDir, { recursive: true });
+			}
+
+			// Execute core parsePRD function with AI client
+			await parsePRD(
+				inputPath,
+				outputPath,
+				numTasks,
+				{
+					mcpLog: logWrapper,
+					session
+				},
+				aiClient,
+				modelConfig
+			);
+
+			// Since parsePRD doesn't return a value but writes to a file, we'll read the result
+			// to return it to the caller
+			if (fs.existsSync(outputPath)) {
+				const tasksData = JSON.parse(fs.readFileSync(outputPath, 'utf8'));
+				log.info(
+					`Successfully parsed PRD and generated ${tasksData.tasks?.length || 0} tasks`
+				);
+
+				return {
+					success: true,
+					data: {
+						message: `Successfully generated ${tasksData.tasks?.length || 0} tasks from PRD`,
+						taskCount: tasksData.tasks?.length || 0,
+						outputPath
+					},
+					fromCache: false // This operation always modifies state and should never be cached
+				};
+			} else {
+				const errorMessage = `Tasks file was not created at ${outputPath}`;
+				log.error(errorMessage);
+				return {
+					success: false,
+					error: { code: 'OUTPUT_FILE_NOT_CREATED', message: errorMessage },
+					fromCache: false
+				};
+			}
+		} finally {
+			// Always restore normal logging
+			disableSilentMode();
+		}
+	} catch (error) {
+		// Make sure to restore normal logging even if there's an error
+		disableSilentMode();
+
+		log.error(`Error parsing PRD: ${error.message}`);
+		return {
+			success: false,
+			error: {
+				code: 'PARSE_PRD_ERROR',
+				message: error.message || 'Unknown error parsing PRD'
+			},
+			fromCache: false
+		};
+	}
 }

mcp-server/src/core/direct-functions/remove-dependency.js

@@ -3,81 +3,102 @@
  */
 
 import { removeDependency } from '../../../../scripts/modules/dependency-manager.js';
-import { findTasksJsonPath } from '../utils/path-utils.js';
-import { enableSilentMode, disableSilentMode } from '../../../../scripts/modules/utils.js';
+import {
+	enableSilentMode,
+	disableSilentMode
+} from '../../../../scripts/modules/utils.js';
 
 /**
  * Remove a dependency from a task
  * @param {Object} args - Function arguments
+ * @param {string} args.tasksJsonPath - Explicit path to the tasks.json file.
  * @param {string|number} args.id - Task ID to remove dependency from
  * @param {string|number} args.dependsOn - Task ID to remove as a dependency
- * @param {string} [args.file] - Path to the tasks file
- * @param {string} [args.projectRoot] - Project root directory
  * @param {Object} log - Logger object
  * @returns {Promise<{success: boolean, data?: Object, error?: {code: string, message: string}}>}
  */
 export async function removeDependencyDirect(args, log) {
-  try {
-    log.info(`Removing dependency with args: ${JSON.stringify(args)}`);
+	// Destructure expected args
+	const { tasksJsonPath, id, dependsOn } = args;
+	try {
+		log.info(`Removing dependency with args: ${JSON.stringify(args)}`);
 
-    // Validate required parameters
-    if (!args.id) {
-      return {
-        success: false,
-        error: {
-          code: 'INPUT_VALIDATION_ERROR',
-          message: 'Task ID (id) is required'
-        }
-      };
-    }
+		// Check if tasksJsonPath was provided
+		if (!tasksJsonPath) {
+			log.error('removeDependencyDirect called without tasksJsonPath');
+			return {
+				success: false,
+				error: {
+					code: 'MISSING_ARGUMENT',
+					message: 'tasksJsonPath is required'
+				}
+			};
+		}
 
-    if (!args.dependsOn) {
-      return {
-        success: false,
-        error: {
-          code: 'INPUT_VALIDATION_ERROR',
-          message: 'Dependency ID (dependsOn) is required'
-        }
-      };
-    }
+		// Validate required parameters
+		if (!id) {
+			return {
+				success: false,
+				error: {
+					code: 'INPUT_VALIDATION_ERROR',
+					message: 'Task ID (id) is required'
+				}
+			};
+		}
 
-    // Find the tasks.json path
-    const tasksPath = findTasksJsonPath(args, log);
+		if (!dependsOn) {
+			return {
+				success: false,
+				error: {
+					code: 'INPUT_VALIDATION_ERROR',
+					message: 'Dependency ID (dependsOn) is required'
+				}
+			};
+		}
 
-    // Format IDs for the core function
-    const taskId = args.id.includes && args.id.includes('.') ? args.id : parseInt(args.id, 10);
-    const dependencyId = args.dependsOn.includes && args.dependsOn.includes('.') ? args.dependsOn : parseInt(args.dependsOn, 10);
+		// Use provided path
+		const tasksPath = tasksJsonPath;
 
-    log.info(`Removing dependency: task ${taskId} no longer depends on ${dependencyId}`);
+		// Format IDs for the core function
+		const taskId =
+			id && id.includes && id.includes('.') ? id : parseInt(id, 10);
+		const dependencyId =
+			dependsOn && dependsOn.includes && dependsOn.includes('.')
+				? dependsOn
+				: parseInt(dependsOn, 10);
 
-    // Enable silent mode to prevent console logs from interfering with JSON response
-    enableSilentMode();
+		log.info(
+			`Removing dependency: task ${taskId} no longer depends on ${dependencyId}`
+		);
 
-    // Call the core function
-    await removeDependency(tasksPath, taskId, dependencyId);
+		// Enable silent mode to prevent console logs from interfering with JSON response
+		enableSilentMode();
 
-    // Restore normal logging
-    disableSilentMode();
+		// Call the core function using the provided tasksPath
+		await removeDependency(tasksPath, taskId, dependencyId);
 
-    return {
-      success: true,
-      data: {
-        message: `Successfully removed dependency: Task ${taskId} no longer depends on ${dependencyId}`,
-        taskId: taskId,
-        dependencyId: dependencyId
-      }
-    };
-  } catch (error) {
-    // Make sure to restore normal logging even if there's an error
-    disableSilentMode();
+		// Restore normal logging
+		disableSilentMode();
 
-    log.error(`Error in removeDependencyDirect: ${error.message}`);
-    return {
-      success: false,
-      error: {
-        code: 'CORE_FUNCTION_ERROR',
-        message: error.message
-      }
-    };
-  }
+		return {
+			success: true,
+			data: {
+				message: `Successfully removed dependency: Task ${taskId} no longer depends on ${dependencyId}`,
+				taskId: taskId,
+				dependencyId: dependencyId
+			}
+		};
+	} catch (error) {
+		// Make sure to restore normal logging even if there's an error
+		disableSilentMode();
+
+		log.error(`Error in removeDependencyDirect: ${error.message}`);
+		return {
+			success: false,
+			error: {
+				code: 'CORE_FUNCTION_ERROR',
+				message: error.message
+			}
+		};
+	}
 }

mcp-server/src/core/direct-functions/remove-subtask.js

@@ -3,93 +3,120 @@
  */
 
 import { removeSubtask } from '../../../../scripts/modules/task-manager.js';
-import { findTasksJsonPath } from '../utils/path-utils.js';
-import { enableSilentMode, disableSilentMode } from '../../../../scripts/modules/utils.js';
+import {
+	enableSilentMode,
+	disableSilentMode
+} from '../../../../scripts/modules/utils.js';
 
 /**
  * Remove a subtask from its parent task
  * @param {Object} args - Function arguments
+ * @param {string} args.tasksJsonPath - Explicit path to the tasks.json file.
  * @param {string} args.id - Subtask ID in format "parentId.subtaskId" (required)
  * @param {boolean} [args.convert] - Whether to convert the subtask to a standalone task
- * @param {string} [args.file] - Path to the tasks file
  * @param {boolean} [args.skipGenerate] - Skip regenerating task files
- * @param {string} [args.projectRoot] - Project root directory
  * @param {Object} log - Logger object
  * @returns {Promise<{success: boolean, data?: Object, error?: {code: string, message: string}}>}
  */
 export async function removeSubtaskDirect(args, log) {
-  try {
-    // Enable silent mode to prevent console logs from interfering with JSON response
-    enableSilentMode();
+	// Destructure expected args
+	const { tasksJsonPath, id, convert, skipGenerate } = args;
+	try {
+		// Enable silent mode to prevent console logs from interfering with JSON response
+		enableSilentMode();
 
-    log.info(`Removing subtask with args: ${JSON.stringify(args)}`);
+		log.info(`Removing subtask with args: ${JSON.stringify(args)}`);
 
-    if (!args.id) {
-      return {
-        success: false,
-        error: {
-          code: 'INPUT_VALIDATION_ERROR',
-          message: 'Subtask ID is required and must be in format "parentId.subtaskId"'
-        }
-      };
-    }
+		// Check if tasksJsonPath was provided
+		if (!tasksJsonPath) {
+			log.error('removeSubtaskDirect called without tasksJsonPath');
+			disableSilentMode(); // Disable before returning
+			return {
+				success: false,
+				error: {
+					code: 'MISSING_ARGUMENT',
+					message: 'tasksJsonPath is required'
+				}
+			};
+		}
 
-    // Validate subtask ID format
-    if (!args.id.includes('.')) {
-      return {
-        success: false,
-        error: {
-          code: 'INPUT_VALIDATION_ERROR',
-          message: `Invalid subtask ID format: ${args.id}. Expected format: "parentId.subtaskId"`
-        }
-      };
-    }
+		if (!id) {
+			disableSilentMode(); // Disable before returning
+			return {
+				success: false,
+				error: {
+					code: 'INPUT_VALIDATION_ERROR',
+					message:
+						'Subtask ID is required and must be in format "parentId.subtaskId"'
+				}
+			};
+		}
 
-    // Find the tasks.json path
-    const tasksPath = findTasksJsonPath(args, log);
+		// Validate subtask ID format
+		if (!id.includes('.')) {
+			disableSilentMode(); // Disable before returning
+			return {
+				success: false,
+				error: {
+					code: 'INPUT_VALIDATION_ERROR',
+					message: `Invalid subtask ID format: ${id}. Expected format: "parentId.subtaskId"`
+				}
+			};
+		}
 
-    // Convert convertToTask to a boolean
-    const convertToTask = args.convert === true;
+		// Use provided path
+		const tasksPath = tasksJsonPath;
 
-    // Determine if we should generate files
-    const generateFiles = !args.skipGenerate;
+		// Convert convertToTask to a boolean
+		const convertToTask = convert === true;
 
-    log.info(`Removing subtask ${args.id} (convertToTask: ${convertToTask}, generateFiles: ${generateFiles})`);
+		// Determine if we should generate files
+		const generateFiles = !skipGenerate;
 
-    const result = await removeSubtask(tasksPath, args.id, convertToTask, generateFiles);
+		log.info(
+			`Removing subtask ${id} (convertToTask: ${convertToTask}, generateFiles: ${generateFiles})`
+		);
 
-    // Restore normal logging
-    disableSilentMode();
+		// Use the provided tasksPath
+		const result = await removeSubtask(
+			tasksPath,
+			id,
+			convertToTask,
+			generateFiles
+		);
 
-    if (convertToTask && result) {
-      // Return info about the converted task
-      return {
-        success: true,
-        data: {
-          message: `Subtask ${args.id} successfully converted to task #${result.id}`,
-          task: result
-        }
-      };
-    } else {
-      // Return simple success message for deletion
-      return {
-        success: true,
-        data: {
-          message: `Subtask ${args.id} successfully removed`
-        }
-      };
-    }
-  } catch (error) {
-    // Ensure silent mode is disabled even if an outer error occurs
-    disableSilentMode();
+		// Restore normal logging
+		disableSilentMode();
 
-    log.error(`Error in removeSubtaskDirect: ${error.message}`);
-    return {
-      success: false,
-      error: {
-        code: 'CORE_FUNCTION_ERROR',
-        message: error.message
-      }
-    };
-  }
+		if (convertToTask && result) {
+			// Return info about the converted task
+			return {
+				success: true,
+				data: {
+					message: `Subtask ${id} successfully converted to task #${result.id}`,
+					task: result
+				}
+			};
+		} else {
+			// Return simple success message for deletion
+			return {
+				success: true,
+				data: {
+					message: `Subtask ${id} successfully removed`
+				}
+			};
+		}
+	} catch (error) {
+		// Ensure silent mode is disabled even if an outer error occurs
+		disableSilentMode();
+
+		log.error(`Error in removeSubtaskDirect: ${error.message}`);
+		return {
+			success: false,
+			error: {
+				code: 'CORE_FUNCTION_ERROR',
+				message: error.message
+			}
+		};
+	}
 }

mcp-server/src/core/direct-functions/remove-task.js

@@ -4,101 +4,104 @@
  */
 
 import { removeTask } from '../../../../scripts/modules/task-manager.js';
-import { enableSilentMode, disableSilentMode } from '../../../../scripts/modules/utils.js';
-import { findTasksJsonPath } from '../utils/path-utils.js';
+import {
+	enableSilentMode,
+	disableSilentMode
+} from '../../../../scripts/modules/utils.js';
 
 /**
  * Direct function wrapper for removeTask with error handling.
  *
  * @param {Object} args - Command arguments
+ * @param {string} args.tasksJsonPath - Explicit path to the tasks.json file.
+ * @param {string} args.id - The ID of the task or subtask to remove.
  * @param {Object} log - Logger object
  * @returns {Promise<Object>} - Remove task result { success: boolean, data?: any, error?: { code: string, message: string }, fromCache: false }
  */
 export async function removeTaskDirect(args, log) {
-  try {
-    // Find the tasks path first
-    let tasksPath;
-    try {
-      tasksPath = findTasksJsonPath(args, log);
-    } catch (error) {
-      log.error(`Tasks file not found: ${error.message}`);
-      return { 
-        success: false, 
-        error: { 
-          code: 'FILE_NOT_FOUND_ERROR', 
-          message: error.message 
-        }, 
-        fromCache: false 
-      };
-    }
+	// Destructure expected args
+	const { tasksJsonPath, id } = args;
+	try {
+		// Check if tasksJsonPath was provided
+		if (!tasksJsonPath) {
+			log.error('removeTaskDirect called without tasksJsonPath');
+			return {
+				success: false,
+				error: {
+					code: 'MISSING_ARGUMENT',
+					message: 'tasksJsonPath is required'
+				},
+				fromCache: false
+			};
+		}
 
-    // Validate task ID parameter
-    const taskId = args.id;
-    if (!taskId) {
-      log.error('Task ID is required');
-      return { 
-        success: false, 
-        error: { 
-          code: 'INPUT_VALIDATION_ERROR', 
-          message: 'Task ID is required' 
-        }, 
-        fromCache: false 
-      };
-    }
+		// Validate task ID parameter
+		const taskId = id;
+		if (!taskId) {
+			log.error('Task ID is required');
+			return {
+				success: false,
+				error: {
+					code: 'INPUT_VALIDATION_ERROR',
+					message: 'Task ID is required'
+				},
+				fromCache: false
+			};
+		}
 
-    // Skip confirmation in the direct function since it's handled by the client
-    log.info(`Removing task with ID: ${taskId} from ${tasksPath}`);
+		// Skip confirmation in the direct function since it's handled by the client
+		log.info(`Removing task with ID: ${taskId} from ${tasksJsonPath}`);
 
-    try {
-      // Enable silent mode to prevent console logs from interfering with JSON response
-      enableSilentMode();
+		try {
+			// Enable silent mode to prevent console logs from interfering with JSON response
+			enableSilentMode();
 
-      // Call the core removeTask function
-      const result = await removeTask(tasksPath, taskId);
+			// Call the core removeTask function using the provided path
+			const result = await removeTask(tasksJsonPath, taskId);
 
-      // Restore normal logging
-      disableSilentMode();
+			// Restore normal logging
+			disableSilentMode();
 
-      log.info(`Successfully removed task: ${taskId}`);
+			log.info(`Successfully removed task: ${taskId}`);
 
-      // Return the result
-      return {
-        success: true,
-        data: {
-          message: result.message,
-          taskId: taskId,
-          tasksPath: tasksPath,
-          removedTask: result.removedTask
-        },
-        fromCache: false
-      };
-    } catch (error) {
-      // Make sure to restore normal logging even if there's an error
-      disableSilentMode();
+			// Return the result
+			return {
+				success: true,
+				data: {
+					message: result.message,
+					taskId: taskId,
+					tasksPath: tasksJsonPath,
+					removedTask: result.removedTask
+				},
+				fromCache: false
+			};
+		} catch (error) {
+			// Make sure to restore normal logging even if there's an error
+			disableSilentMode();
 
-      log.error(`Error removing task: ${error.message}`);
-      return { 
-        success: false, 
-        error: { 
-          code: error.code || 'REMOVE_TASK_ERROR', 
-          message: error.message || 'Failed to remove task' 
-        }, 
-        fromCache: false 
-      };
-    }
-  } catch (error) {
-    // Ensure silent mode is disabled even if an outer error occurs
-    disableSilentMode();
+			log.error(`Error removing task: ${error.message}`);
+			return {
+				success: false,
+				error: {
+					code: error.code || 'REMOVE_TASK_ERROR',
+					message: error.message || 'Failed to remove task'
+				},
+				fromCache: false
+			};
+		}
+	} catch (error) {
+		// Ensure silent mode is disabled even if an outer error occurs
+		disableSilentMode();
 
-    // Catch any unexpected errors
-    log.error(`Unexpected error in removeTaskDirect: ${error.message}`);
-    return { 
-      success: false, 
-      error: { 
-        code: 'UNEXPECTED_ERROR', 
-        message: error.message 
-      }, 
-      fromCache: false 
-    };
-  }
+		// Catch any unexpected errors
+		log.error(`Unexpected error in removeTaskDirect: ${error.message}`);
+		return {
+			success: false,
+			error: {
+				code: 'UNEXPECTED_ERROR',
+				message: error.message
+			},
+			fromCache: false
+		};
+	}
 }

mcp-server/src/core/direct-functions/set-task-status.js

@@ -4,109 +4,116 @@
  */
 
 import { setTaskStatus } from '../../../../scripts/modules/task-manager.js';
-import { findTasksJsonPath } from '../utils/path-utils.js';
-import { enableSilentMode, disableSilentMode, isSilentMode } from '../../../../scripts/modules/utils.js';
+import {
+	enableSilentMode,
+	disableSilentMode,
+	isSilentMode
+} from '../../../../scripts/modules/utils.js';
 
 /**
  * Direct function wrapper for setTaskStatus with error handling.
  *
- * @param {Object} args - Command arguments containing id, status and file path options.
+ * @param {Object} args - Command arguments containing id, status and tasksJsonPath.
  * @param {Object} log - Logger object.
  * @returns {Promise<Object>} - Result object with success status and data/error information.
  */
 export async function setTaskStatusDirect(args, log) {
-  try {
-    log.info(`Setting task status with args: ${JSON.stringify(args)}`);
+	// Destructure expected args, including the resolved tasksJsonPath
+	const { tasksJsonPath, id, status } = args;
+	try {
+		log.info(`Setting task status with args: ${JSON.stringify(args)}`);
 
-    // Check required parameters
-    if (!args.id) {
-      const errorMessage = 'No task ID specified. Please provide a task ID to update.';
-      log.error(errorMessage);
-      return { 
-        success: false, 
-        error: { code: 'MISSING_TASK_ID', message: errorMessage },
-        fromCache: false 
-      };
-    }
+		// Check if tasksJsonPath was provided
+		if (!tasksJsonPath) {
+			const errorMessage = 'tasksJsonPath is required but was not provided.';
+			log.error(errorMessage);
+			return {
+				success: false,
+				error: { code: 'MISSING_ARGUMENT', message: errorMessage },
+				fromCache: false
+			};
+		}
 
-    if (!args.status) {
-      const errorMessage = 'No status specified. Please provide a new status value.';
-      log.error(errorMessage);
-      return { 
-        success: false, 
-        error: { code: 'MISSING_STATUS', message: errorMessage },
-        fromCache: false 
-      };
-    }
+		// Check required parameters (id and status)
+		if (!id) {
+			const errorMessage =
+				'No task ID specified. Please provide a task ID to update.';
+			log.error(errorMessage);
+			return {
+				success: false,
+				error: { code: 'MISSING_TASK_ID', message: errorMessage },
+				fromCache: false
+			};
+		}
 
-    // Get tasks file path
-    let tasksPath;
-    try {
-      // The enhanced findTasksJsonPath will now search in parent directories if needed
-      tasksPath = findTasksJsonPath(args, log);
-      log.info(`Found tasks file at: ${tasksPath}`);
-    } catch (error) {
-      log.error(`Error finding tasks file: ${error.message}`);
-      return { 
-        success: false, 
-        error: { 
-          code: 'TASKS_FILE_ERROR', 
-          message: `${error.message}\n\nPlease ensure you are in a Task Master project directory or use the --project-root parameter to specify the path to your project.`
-        },
-        fromCache: false 
-      };
-    }
+		if (!status) {
+			const errorMessage =
+				'No status specified. Please provide a new status value.';
+			log.error(errorMessage);
+			return {
+				success: false,
+				error: { code: 'MISSING_STATUS', message: errorMessage },
+				fromCache: false
+			};
+		}
 
-    // Execute core setTaskStatus function
-    const taskId = args.id;
-    const newStatus = args.status;
+		// Use the provided path
+		const tasksPath = tasksJsonPath;
 
-    log.info(`Setting task ${taskId} status to "${newStatus}"`);
+		// Execute core setTaskStatus function
+		const taskId = id;
+		const newStatus = status;
 
-    // Call the core function with proper silent mode handling
-    let result;
-    enableSilentMode(); // Enable silent mode before calling core function
-    try {
-      // Call the core function
-      await setTaskStatus(tasksPath, taskId, newStatus, { mcpLog: log });
+		log.info(`Setting task ${taskId} status to "${newStatus}"`);
 
-      log.info(`Successfully set task ${taskId} status to ${newStatus}`);
+		// Call the core function with proper silent mode handling
+		enableSilentMode(); // Enable silent mode before calling core function
+		try {
+			// Call the core function
+			await setTaskStatus(tasksPath, taskId, newStatus, { mcpLog: log });
 
-      // Return success data
-      result = {
-        success: true,
-        data: {
-          message: `Successfully updated task ${taskId} status to "${newStatus}"`,
-          taskId,
-          status: newStatus,
-          tasksPath
-        },
-        fromCache: false // This operation always modifies state and should never be cached
-      };
-    } catch (error) {
-      log.error(`Error setting task status: ${error.message}`);
-      result = { 
-        success: false, 
-        error: { code: 'SET_STATUS_ERROR', message: error.message || 'Unknown error setting task status' },
-        fromCache: false 
-      };
-    } finally {
-      // ALWAYS restore normal logging in finally block
-      disableSilentMode();
-    }
+			log.info(`Successfully set task ${taskId} status to ${newStatus}`);
 
-    return result;
-  } catch (error) {
-    // Ensure silent mode is disabled if there was an uncaught error in the outer try block
-    if (isSilentMode()) {
-      disableSilentMode();
-    }
+			// Return success data
+			const result = {
+				success: true,
+				data: {
+					message: `Successfully updated task ${taskId} status to "${newStatus}"`,
+					taskId,
+					status: newStatus,
+					tasksPath: tasksPath // Return the path used
+				},
+				fromCache: false // This operation always modifies state and should never be cached
+			};
+			return result;
+		} catch (error) {
+			log.error(`Error setting task status: ${error.message}`);
+			return {
+				success: false,
+				error: {
+					code: 'SET_STATUS_ERROR',
+					message: error.message || 'Unknown error setting task status'
+				},
+				fromCache: false
+			};
+		} finally {
+			// ALWAYS restore normal logging in finally block
+			disableSilentMode();
+		}
+	} catch (error) {
+		// Ensure silent mode is disabled if there was an uncaught error in the outer try block
+		if (isSilentMode()) {
+			disableSilentMode();
+		}
 
-    log.error(`Error setting task status: ${error.message}`);
-    return { 
-      success: false, 
-      error: { code: 'SET_STATUS_ERROR', message: error.message || 'Unknown error setting task status' },
-      fromCache: false 
-    };
-  }
+		log.error(`Error setting task status: ${error.message}`);
+		return {
+			success: false,
+			error: {
+				code: 'SET_STATUS_ERROR',
+				message: error.message || 'Unknown error setting task status'
+			},
+			fromCache: false
+		};
+	}
 }

mcp-server/src/core/direct-functions/show-task.js

@@ -6,131 +6,140 @@
 import { findTaskById } from '../../../../scripts/modules/utils.js';
 import { readJSON } from '../../../../scripts/modules/utils.js';
 import { getCachedOrExecute } from '../../tools/utils.js';
-import { findTasksJsonPath } from '../utils/path-utils.js';
-import { enableSilentMode, disableSilentMode } from '../../../../scripts/modules/utils.js';
+import {
+	enableSilentMode,
+	disableSilentMode
+} from '../../../../scripts/modules/utils.js';
 
 /**
  * Direct function wrapper for showing task details with error handling and caching.
  *
  * @param {Object} args - Command arguments
+ * @param {string} args.tasksJsonPath - Explicit path to the tasks.json file.
+ * @param {string} args.id - The ID of the task or subtask to show.
  * @param {Object} log - Logger object
  * @returns {Promise<Object>} - Task details result { success: boolean, data?: any, error?: { code: string, message: string }, fromCache: boolean }
  */
 export async function showTaskDirect(args, log) {
-  let tasksPath;
-  try {
-    // Find the tasks path first - needed for cache key and execution
-    tasksPath = findTasksJsonPath(args, log);
-  } catch (error) {
-    log.error(`Tasks file not found: ${error.message}`);
-    return { 
-      success: false, 
-      error: { 
-        code: 'FILE_NOT_FOUND_ERROR', 
-        message: error.message 
-      }, 
-      fromCache: false 
-    };
-  }
+	// Destructure expected args
+	const { tasksJsonPath, id } = args;
 
-  // Validate task ID
-  const taskId = args.id;
-  if (!taskId) {
-    log.error('Task ID is required');
-    return { 
-      success: false, 
-      error: { 
-        code: 'INPUT_VALIDATION_ERROR', 
-        message: 'Task ID is required' 
-      }, 
-      fromCache: false 
-    };
-  }
+	if (!tasksJsonPath) {
+		log.error('showTaskDirect called without tasksJsonPath');
+		return {
+			success: false,
+			error: {
+				code: 'MISSING_ARGUMENT',
+				message: 'tasksJsonPath is required'
+			},
+			fromCache: false
+		};
+	}
 
-  // Generate cache key using task path and ID
-  const cacheKey = `showTask:${tasksPath}:${taskId}`;
+	// Validate task ID
+	const taskId = id;
+	if (!taskId) {
+		log.error('Task ID is required');
+		return {
+			success: false,
+			error: {
+				code: 'INPUT_VALIDATION_ERROR',
+				message: 'Task ID is required'
+			},
+			fromCache: false
+		};
+	}
 
-  // Define the action function to be executed on cache miss
-  const coreShowTaskAction = async () => {
-    try {
-      // Enable silent mode to prevent console logs from interfering with JSON response
-      enableSilentMode();
+	// Generate cache key using the provided task path and ID
+	const cacheKey = `showTask:${tasksJsonPath}:${taskId}`;
 
-      log.info(`Retrieving task details for ID: ${taskId} from ${tasksPath}`);
+	// Define the action function to be executed on cache miss
+	const coreShowTaskAction = async () => {
+		try {
+			// Enable silent mode to prevent console logs from interfering with JSON response
+			enableSilentMode();
 
-      // Read tasks data
-      const data = readJSON(tasksPath);
-      if (!data || !data.tasks) {
-        return { 
-          success: false, 
-          error: { 
-            code: 'INVALID_TASKS_FILE', 
-            message: `No valid tasks found in ${tasksPath}` 
-          } 
-        };
-      }
+			log.info(
+				`Retrieving task details for ID: ${taskId} from ${tasksJsonPath}`
+			);
 
-      // Find the specific task
-      const task = findTaskById(data.tasks, taskId);
+			// Read tasks data using the provided path
+			const data = readJSON(tasksJsonPath);
+			if (!data || !data.tasks) {
+				disableSilentMode(); // Disable before returning
+				return {
+					success: false,
+					error: {
+						code: 'INVALID_TASKS_FILE',
+						message: `No valid tasks found in ${tasksJsonPath}`
+					}
+				};
+			}
 
-      if (!task) {
-        return { 
-          success: false, 
-          error: { 
-            code: 'TASK_NOT_FOUND', 
-            message: `Task with ID ${taskId} not found` 
-          } 
-        };
-      }
+			// Find the specific task
+			const task = findTaskById(data.tasks, taskId);
 
-      // Restore normal logging
-      disableSilentMode();
+			if (!task) {
+				disableSilentMode(); // Disable before returning
+				return {
+					success: false,
+					error: {
+						code: 'TASK_NOT_FOUND',
+						message: `Task with ID ${taskId} not found`
+					}
+				};
+			}
 
-      // Return the task data with the full tasks array for reference
-      // (needed for formatDependenciesWithStatus function in UI)
-      log.info(`Successfully found task ${taskId}`);
-      return { 
-        success: true, 
-        data: { 
-          task, 
-          allTasks: data.tasks 
-        } 
-      };
-    } catch (error) {
-      // Make sure to restore normal logging even if there's an error
-      disableSilentMode();
+			// Restore normal logging
+			disableSilentMode();
 
-      log.error(`Error showing task: ${error.message}`);
-      return { 
-        success: false, 
-        error: { 
-          code: 'CORE_FUNCTION_ERROR', 
-          message: error.message || 'Failed to show task details' 
-        } 
-      };
-    }
-  };
+			// Return the task data with the full tasks array for reference
+			// (needed for formatDependenciesWithStatus function in UI)
+			log.info(`Successfully found task ${taskId}`);
+			return {
+				success: true,
+				data: {
+					task,
+					allTasks: data.tasks
+				}
+			};
+		} catch (error) {
+			// Make sure to restore normal logging even if there's an error
+			disableSilentMode();
 
-  // Use the caching utility
-  try {
-    const result = await getCachedOrExecute({
-      cacheKey,
-      actionFn: coreShowTaskAction,
-      log
-    });
-    log.info(`showTaskDirect completed. From cache: ${result.fromCache}`);
-    return result; // Returns { success, data/error, fromCache }
-  } catch (error) {
-    // Catch unexpected errors from getCachedOrExecute itself
-    disableSilentMode();
-    log.error(`Unexpected error during getCachedOrExecute for showTask: ${error.message}`);
-    return { 
-      success: false, 
-      error: { 
-        code: 'UNEXPECTED_ERROR', 
-        message: error.message 
-      }, 
-      fromCache: false 
-    };
-  }
+			log.error(`Error showing task: ${error.message}`);
+			return {
+				success: false,
+				error: {
+					code: 'CORE_FUNCTION_ERROR',
+					message: error.message || 'Failed to show task details'
+				}
+			};
+		}
+	};
+
+	// Use the caching utility
+	try {
+		const result = await getCachedOrExecute({
+			cacheKey,
+			actionFn: coreShowTaskAction,
+			log
+		});
+		log.info(`showTaskDirect completed. From cache: ${result.fromCache}`);
+		return result; // Returns { success, data/error, fromCache }
+	} catch (error) {
+		// Catch unexpected errors from getCachedOrExecute itself
+		disableSilentMode();
+		log.error(
+			`Unexpected error during getCachedOrExecute for showTask: ${error.message}`
+		);
+		return {
+			success: false,
+			error: {
+				code: 'UNEXPECTED_ERROR',
+				message: error.message
+			},
+			fromCache: false
+		};
+	}
 }

mcp-server/src/core/direct-functions/update-subtask-by-id.js

@@ -4,167 +4,191 @@
  */
 
 import { updateSubtaskById } from '../../../../scripts/modules/task-manager.js';
-import { enableSilentMode, disableSilentMode } from '../../../../scripts/modules/utils.js';
-import { findTasksJsonPath } from '../utils/path-utils.js';
-import { getAnthropicClientForMCP, getPerplexityClientForMCP } from '../utils/ai-client-utils.js';
+import {
+	enableSilentMode,
+	disableSilentMode
+} from '../../../../scripts/modules/utils.js';
+import {
+	getAnthropicClientForMCP,
+	getPerplexityClientForMCP
+} from '../utils/ai-client-utils.js';
 
 /**
  * Direct function wrapper for updateSubtaskById with error handling.
  *
- * @param {Object} args - Command arguments containing id, prompt, useResearch and file path options.
+ * @param {Object} args - Command arguments containing id, prompt, useResearch and tasksJsonPath.
  * @param {Object} log - Logger object.
  * @param {Object} context - Context object containing session data.
  * @returns {Promise<Object>} - Result object with success status and data/error information.
  */
 export async function updateSubtaskByIdDirect(args, log, context = {}) {
-  const { session } = context; // Only extract session, not reportProgress
+	const { session } = context; // Only extract session, not reportProgress
+	const { tasksJsonPath, id, prompt, research } = args;
 
-  try {
-    log.info(`Updating subtask with args: ${JSON.stringify(args)}`);
+	try {
+		log.info(`Updating subtask with args: ${JSON.stringify(args)}`);
 
-    // Check required parameters
-    if (!args.id) {
-      const errorMessage = 'No subtask ID specified. Please provide a subtask ID to update.';
-      log.error(errorMessage);
-      return { 
-        success: false, 
-        error: { code: 'MISSING_SUBTASK_ID', message: errorMessage },
-        fromCache: false 
-      };
-    }
+		// Check if tasksJsonPath was provided
+		if (!tasksJsonPath) {
+			const errorMessage = 'tasksJsonPath is required but was not provided.';
+			log.error(errorMessage);
+			return {
+				success: false,
+				error: { code: 'MISSING_ARGUMENT', message: errorMessage },
+				fromCache: false
+			};
+		}
 
-    if (!args.prompt) {
-      const errorMessage = 'No prompt specified. Please provide a prompt with information to add to the subtask.';
-      log.error(errorMessage);
-      return { 
-        success: false, 
-        error: { code: 'MISSING_PROMPT', message: errorMessage },
-        fromCache: false 
-      };
-    }
+		// Check required parameters (id and prompt)
+		if (!id) {
+			const errorMessage =
+				'No subtask ID specified. Please provide a subtask ID to update.';
+			log.error(errorMessage);
+			return {
+				success: false,
+				error: { code: 'MISSING_SUBTASK_ID', message: errorMessage },
+				fromCache: false
+			};
+		}
 
-    // Validate subtask ID format
-    const subtaskId = args.id;
-    if (typeof subtaskId !== 'string' && typeof subtaskId !== 'number') {
-      const errorMessage = `Invalid subtask ID type: ${typeof subtaskId}. Subtask ID must be a string or number.`;
-      log.error(errorMessage);
-      return {
-        success: false,
-        error: { code: 'INVALID_SUBTASK_ID_TYPE', message: errorMessage },
-        fromCache: false
-      };
-    }
+		if (!prompt) {
+			const errorMessage =
+				'No prompt specified. Please provide a prompt with information to add to the subtask.';
+			log.error(errorMessage);
+			return {
+				success: false,
+				error: { code: 'MISSING_PROMPT', message: errorMessage },
+				fromCache: false
+			};
+		}
 
-    const subtaskIdStr = String(subtaskId);
-    if (!subtaskIdStr.includes('.')) {
-      const errorMessage = `Invalid subtask ID format: ${subtaskIdStr}. Subtask ID must be in format "parentId.subtaskId" (e.g., "5.2").`;
-      log.error(errorMessage);
-      return { 
-        success: false, 
-        error: { code: 'INVALID_SUBTASK_ID_FORMAT', message: errorMessage },
-        fromCache: false 
-      };
-    }
+		// Validate subtask ID format
+		const subtaskId = id;
+		if (typeof subtaskId !== 'string' && typeof subtaskId !== 'number') {
+			const errorMessage = `Invalid subtask ID type: ${typeof subtaskId}. Subtask ID must be a string or number.`;
+			log.error(errorMessage);
+			return {
+				success: false,
+				error: { code: 'INVALID_SUBTASK_ID_TYPE', message: errorMessage },
+				fromCache: false
+			};
+		}
 
-    // Get tasks file path
-    let tasksPath;
-    try {
-      tasksPath = findTasksJsonPath(args, log);
-    } catch (error) {
-      log.error(`Error finding tasks file: ${error.message}`);
-      return { 
-        success: false, 
-        error: { code: 'TASKS_FILE_ERROR', message: error.message },
-        fromCache: false 
-      };
-    }
+		const subtaskIdStr = String(subtaskId);
+		if (!subtaskIdStr.includes('.')) {
+			const errorMessage = `Invalid subtask ID format: ${subtaskIdStr}. Subtask ID must be in format "parentId.subtaskId" (e.g., "5.2").`;
+			log.error(errorMessage);
+			return {
+				success: false,
+				error: { code: 'INVALID_SUBTASK_ID_FORMAT', message: errorMessage },
+				fromCache: false
+			};
+		}
 
-    // Get research flag
-    const useResearch = args.research === true;
+		// Use the provided path
+		const tasksPath = tasksJsonPath;
 
-    log.info(`Updating subtask with ID ${subtaskIdStr} with prompt "${args.prompt}" and research: ${useResearch}`);
+		// Get research flag
+		const useResearch = research === true;
 
-    // Initialize the appropriate AI client based on research flag
-    try {
-      if (useResearch) {
-        // Initialize Perplexity client
-        await getPerplexityClientForMCP(session);
-      } else {
-        // Initialize Anthropic client
-        await getAnthropicClientForMCP(session);
-      }
-    } catch (error) {
-      log.error(`AI client initialization error: ${error.message}`);
-      return {
-        success: false,
-        error: { code: 'AI_CLIENT_ERROR', message: error.message || 'Failed to initialize AI client' },
-        fromCache: false
-      };
-    }
+		log.info(
+			`Updating subtask with ID ${subtaskIdStr} with prompt "${prompt}" and research: ${useResearch}`
+		);
 
-    try {
-      // Enable silent mode to prevent console logs from interfering with JSON response
-      enableSilentMode();
+		// Initialize the appropriate AI client based on research flag
+		try {
+			if (useResearch) {
+				// Initialize Perplexity client
+				await getPerplexityClientForMCP(session);
+			} else {
+				// Initialize Anthropic client
+				await getAnthropicClientForMCP(session);
+			}
+		} catch (error) {
+			log.error(`AI client initialization error: ${error.message}`);
+			return {
+				success: false,
+				error: {
+					code: 'AI_CLIENT_ERROR',
+					message: error.message || 'Failed to initialize AI client'
+				},
+				fromCache: false
+			};
+		}
 
-      // Create a logger wrapper object to handle logging without breaking the mcpLog[level] calls
-      // This ensures outputFormat is set to 'json' while still supporting proper logging
-      const logWrapper = {
-        info: (message) => log.info(message),
-        warn: (message) => log.warn(message),
-        error: (message) => log.error(message),
-        debug: (message) => log.debug && log.debug(message),
-        success: (message) => log.info(message) // Map success to info if needed
-      };
+		try {
+			// Enable silent mode to prevent console logs from interfering with JSON response
+			enableSilentMode();
 
-      // Execute core updateSubtaskById function
-      // Pass both session and logWrapper as mcpLog to ensure outputFormat is 'json'
-      const updatedSubtask = await updateSubtaskById(tasksPath, subtaskIdStr, args.prompt, useResearch, { 
-        session,
-        mcpLog: logWrapper 
-      });
+			// Create a logger wrapper object to handle logging without breaking the mcpLog[level] calls
+			// This ensures outputFormat is set to 'json' while still supporting proper logging
+			const logWrapper = {
+				info: (message) => log.info(message),
+				warn: (message) => log.warn(message),
+				error: (message) => log.error(message),
+				debug: (message) => log.debug && log.debug(message),
+				success: (message) => log.info(message) // Map success to info if needed
+			};
 
-      // Restore normal logging
-      disableSilentMode();
+			// Execute core updateSubtaskById function
+			// Pass both session and logWrapper as mcpLog to ensure outputFormat is 'json'
+			const updatedSubtask = await updateSubtaskById(
+				tasksPath,
+				subtaskIdStr,
+				prompt,
+				useResearch,
+				{
+					session,
+					mcpLog: logWrapper
+				}
+			);
 
-      // Handle the case where the subtask couldn't be updated (e.g., already marked as done)
-      if (!updatedSubtask) {
-        return {
-          success: false,
-          error: { 
-            code: 'SUBTASK_UPDATE_FAILED', 
-            message: 'Failed to update subtask. It may be marked as completed, or another error occurred.' 
-          },
-          fromCache: false
-        };
-      }
+			// Restore normal logging
+			disableSilentMode();
 
-      // Return the updated subtask information
-      return {
-        success: true,
-        data: {
-          message: `Successfully updated subtask with ID ${subtaskIdStr}`,
-          subtaskId: subtaskIdStr,
-          parentId: subtaskIdStr.split('.')[0],
-          subtask: updatedSubtask,
-          tasksPath,
-          useResearch
-        },
-        fromCache: false // This operation always modifies state and should never be cached
-      };
-    } catch (error) {
-      // Make sure to restore normal logging even if there's an error
-      disableSilentMode();
-      throw error; // Rethrow to be caught by outer catch block
-    }
-  } catch (error) {
-    // Ensure silent mode is disabled
-    disableSilentMode();
+			// Handle the case where the subtask couldn't be updated (e.g., already marked as done)
+			if (!updatedSubtask) {
+				return {
+					success: false,
+					error: {
+						code: 'SUBTASK_UPDATE_FAILED',
+						message:
+							'Failed to update subtask. It may be marked as completed, or another error occurred.'
+					},
+					fromCache: false
+				};
+			}
 
-    log.error(`Error updating subtask by ID: ${error.message}`);
-    return { 
-      success: false, 
-      error: { code: 'UPDATE_SUBTASK_ERROR', message: error.message || 'Unknown error updating subtask' },
-      fromCache: false 
-    };
-  }
+			// Return the updated subtask information
+			return {
+				success: true,
+				data: {
+					message: `Successfully updated subtask with ID ${subtaskIdStr}`,
+					subtaskId: subtaskIdStr,
+					parentId: subtaskIdStr.split('.')[0],
+					subtask: updatedSubtask,
+					tasksPath,
+					useResearch
+				},
+				fromCache: false // This operation always modifies state and should never be cached
+			};
+		} catch (error) {
+			// Make sure to restore normal logging even if there's an error
+			disableSilentMode();
+			throw error; // Rethrow to be caught by outer catch block
+		}
+	} catch (error) {
+		// Ensure silent mode is disabled
+		disableSilentMode();
+
+		log.error(`Error updating subtask by ID: ${error.message}`);
+		return {
+			success: false,
+			error: {
+				code: 'UPDATE_SUBTASK_ERROR',
+				message: error.message || 'Unknown error updating subtask'
+			},
+			fromCache: false
+		};
+	}
 }

mcp-server/src/core/direct-functions/update-task-by-id.js

@@ -4,169 +4,184 @@
  */
 
 import { updateTaskById } from '../../../../scripts/modules/task-manager.js';
-import { findTasksJsonPath } from '../utils/path-utils.js';
-import { enableSilentMode, disableSilentMode } from '../../../../scripts/modules/utils.js';
 import {
-  getAnthropicClientForMCP, 
-  getPerplexityClientForMCP 
+	enableSilentMode,
+	disableSilentMode
+} from '../../../../scripts/modules/utils.js';
+import {
+	getAnthropicClientForMCP,
+	getPerplexityClientForMCP
 } from '../utils/ai-client-utils.js';
 
 /**
  * Direct function wrapper for updateTaskById with error handling.
  *
- * @param {Object} args - Command arguments containing id, prompt, useResearch and file path options.
+ * @param {Object} args - Command arguments containing id, prompt, useResearch and tasksJsonPath.
  * @param {Object} log - Logger object.
  * @param {Object} context - Context object containing session data.
  * @returns {Promise<Object>} - Result object with success status and data/error information.
  */
 export async function updateTaskByIdDirect(args, log, context = {}) {
-  const { session } = context; // Only extract session, not reportProgress
+	const { session } = context; // Only extract session, not reportProgress
+	// Destructure expected args, including the resolved tasksJsonPath
+	const { tasksJsonPath, id, prompt, research } = args;
 
-  try {
-    log.info(`Updating task with args: ${JSON.stringify(args)}`);
+	try {
+		log.info(`Updating task with args: ${JSON.stringify(args)}`);
 
-    // Check required parameters
-    if (!args.id) {
-      const errorMessage = 'No task ID specified. Please provide a task ID to update.';
-      log.error(errorMessage);
-      return { 
-        success: false, 
-        error: { code: 'MISSING_TASK_ID', message: errorMessage },
-        fromCache: false 
-      };
-    }
+		// Check if tasksJsonPath was provided
+		if (!tasksJsonPath) {
+			const errorMessage = 'tasksJsonPath is required but was not provided.';
+			log.error(errorMessage);
+			return {
+				success: false,
+				error: { code: 'MISSING_ARGUMENT', message: errorMessage },
+				fromCache: false
+			};
+		}
 
-    if (!args.prompt) {
-      const errorMessage = 'No prompt specified. Please provide a prompt with new information for the task update.';
-      log.error(errorMessage);
-      return { 
-        success: false, 
-        error: { code: 'MISSING_PROMPT', message: errorMessage },
-        fromCache: false 
-      };
-    }
+		// Check required parameters (id and prompt)
+		if (!id) {
+			const errorMessage =
+				'No task ID specified. Please provide a task ID to update.';
+			log.error(errorMessage);
+			return {
+				success: false,
+				error: { code: 'MISSING_TASK_ID', message: errorMessage },
+				fromCache: false
+			};
+		}
 
-    // Parse taskId - handle both string and number values
-    let taskId;
-    if (typeof args.id === 'string') {
-      // Handle subtask IDs (e.g., "5.2")
-      if (args.id.includes('.')) {
-        taskId = args.id; // Keep as string for subtask IDs
-      } else {
-        // Parse as integer for main task IDs
-        taskId = parseInt(args.id, 10);
-        if (isNaN(taskId)) {
-          const errorMessage = `Invalid task ID: ${args.id}. Task ID must be a positive integer or subtask ID (e.g., "5.2").`;
-          log.error(errorMessage);
-          return { 
-            success: false, 
-            error: { code: 'INVALID_TASK_ID', message: errorMessage },
-            fromCache: false 
-          };
-        }
-      }
-    } else {
-      taskId = args.id;
-    }
+		if (!prompt) {
+			const errorMessage =
+				'No prompt specified. Please provide a prompt with new information for the task update.';
+			log.error(errorMessage);
+			return {
+				success: false,
+				error: { code: 'MISSING_PROMPT', message: errorMessage },
+				fromCache: false
+			};
+		}
 
-    // Get tasks file path
-    let tasksPath;
-    try {
-      tasksPath = findTasksJsonPath(args, log);
-    } catch (error) {
-      log.error(`Error finding tasks file: ${error.message}`);
-      return { 
-        success: false, 
-        error: { code: 'TASKS_FILE_ERROR', message: error.message },
-        fromCache: false 
-      };
-    }
+		// Parse taskId - handle both string and number values
+		let taskId;
+		if (typeof id === 'string') {
+			// Handle subtask IDs (e.g., "5.2")
+			if (id.includes('.')) {
+				taskId = id; // Keep as string for subtask IDs
+			} else {
+				// Parse as integer for main task IDs
+				taskId = parseInt(id, 10);
+				if (isNaN(taskId)) {
+					const errorMessage = `Invalid task ID: ${id}. Task ID must be a positive integer or subtask ID (e.g., "5.2").`;
+					log.error(errorMessage);
+					return {
+						success: false,
+						error: { code: 'INVALID_TASK_ID', message: errorMessage },
+						fromCache: false
+					};
+				}
+			}
+		} else {
+			taskId = id;
+		}
 
-    // Get research flag
-    const useResearch = args.research === true;
+		// Use the provided path
+		const tasksPath = tasksJsonPath;
 
-    // Initialize appropriate AI client based on research flag
-    let aiClient;
-    try {
-      if (useResearch) {
-        log.info('Using Perplexity AI for research-backed task update');
-        aiClient = await getPerplexityClientForMCP(session, log);
-      } else {
-        log.info('Using Claude AI for task update');
-        aiClient = getAnthropicClientForMCP(session, log);
-      }
-    } catch (error) {
-      log.error(`Failed to initialize AI client: ${error.message}`);
-      return {
-        success: false,
-        error: {
-          code: 'AI_CLIENT_ERROR',
-          message: `Cannot initialize AI client: ${error.message}`
-        },
-        fromCache: false
-      };
-    }
+		// Get research flag
+		const useResearch = research === true;
 
-    log.info(`Updating task with ID ${taskId} with prompt "${args.prompt}" and research: ${useResearch}`);
+		// Initialize appropriate AI client based on research flag
+		let aiClient;
+		try {
+			if (useResearch) {
+				log.info('Using Perplexity AI for research-backed task update');
+				aiClient = await getPerplexityClientForMCP(session, log);
+			} else {
+				log.info('Using Claude AI for task update');
+				aiClient = getAnthropicClientForMCP(session, log);
+			}
+		} catch (error) {
+			log.error(`Failed to initialize AI client: ${error.message}`);
+			return {
+				success: false,
+				error: {
+					code: 'AI_CLIENT_ERROR',
+					message: `Cannot initialize AI client: ${error.message}`
+				},
+				fromCache: false
+			};
+		}
 
-    try {
-      // Enable silent mode to prevent console logs from interfering with JSON response
-      enableSilentMode();
+		log.info(
+			`Updating task with ID ${taskId} with prompt "${prompt}" and research: ${useResearch}`
+		);
 
-      // Create a logger wrapper that matches what updateTaskById expects
-      const logWrapper = {
-        info: (message) => log.info(message),
-        warn: (message) => log.warn(message),
-        error: (message) => log.error(message),
-        debug: (message) => log.debug && log.debug(message),
-        success: (message) => log.info(message) // Map success to info since many loggers don't have success
-      };
+		try {
+			// Enable silent mode to prevent console logs from interfering with JSON response
+			enableSilentMode();
 
-      // Execute core updateTaskById function with proper parameters
-      await updateTaskById(
-        tasksPath, 
-        taskId, 
-        args.prompt, 
-        useResearch, 
-        { 
-          mcpLog: logWrapper, // Use our wrapper object that has the expected method structure
-          session 
-        },
-        'json'
-      );
+			// Create a logger wrapper that matches what updateTaskById expects
+			const logWrapper = {
+				info: (message) => log.info(message),
+				warn: (message) => log.warn(message),
+				error: (message) => log.error(message),
+				debug: (message) => log.debug && log.debug(message),
+				success: (message) => log.info(message) // Map success to info since many loggers don't have success
+			};
 
-      // Since updateTaskById doesn't return a value but modifies the tasks file,
-      // we'll return a success message
-      return {
-        success: true,
-        data: {
-          message: `Successfully updated task with ID ${taskId} based on the prompt`,
-          taskId,
-          tasksPath,
-          useResearch
-        },
-        fromCache: false // This operation always modifies state and should never be cached
-      };
-    } catch (error) {
-      log.error(`Error updating task by ID: ${error.message}`);
-      return { 
-        success: false, 
-        error: { code: 'UPDATE_TASK_ERROR', message: error.message || 'Unknown error updating task' },
-        fromCache: false 
-      };
-    } finally {
-      // Make sure to restore normal logging even if there's an error
-      disableSilentMode();
-    }
-  } catch (error) {
-    // Ensure silent mode is disabled
-    disableSilentMode();
+			// Execute core updateTaskById function with proper parameters
+			await updateTaskById(
+				tasksPath,
+				taskId,
+				prompt,
+				useResearch,
+				{
+					mcpLog: logWrapper, // Use our wrapper object that has the expected method structure
+					session
+				},
+				'json'
+			);
 
-    log.error(`Error updating task by ID: ${error.message}`);
-    return { 
-      success: false, 
-      error: { code: 'UPDATE_TASK_ERROR', message: error.message || 'Unknown error updating task' },
-      fromCache: false 
-    };
-  }
+			// Since updateTaskById doesn't return a value but modifies the tasks file,
+			// we'll return a success message
+			return {
+				success: true,
+				data: {
+					message: `Successfully updated task with ID ${taskId} based on the prompt`,
+					taskId,
+					tasksPath: tasksPath, // Return the used path
+					useResearch
+				},
+				fromCache: false // This operation always modifies state and should never be cached
+			};
+		} catch (error) {
+			log.error(`Error updating task by ID: ${error.message}`);
+			return {
+				success: false,
+				error: {
+					code: 'UPDATE_TASK_ERROR',
+					message: error.message || 'Unknown error updating task'
+				},
+				fromCache: false
+			};
+		} finally {
+			// Make sure to restore normal logging even if there's an error
+			disableSilentMode();
+		}
+	} catch (error) {
+		// Ensure silent mode is disabled
+		disableSilentMode();
+
+		log.error(`Error updating task by ID: ${error.message}`);
+		return {
+			success: false,
+			error: {
+				code: 'UPDATE_TASK_ERROR',
+				message: error.message || 'Unknown error updating task'
+			},
+			fromCache: false
+		};
+	}
 }

mcp-server/src/core/direct-functions/update-tasks.js

@@ -4,168 +4,184 @@
  */
 
 import { updateTasks } from '../../../../scripts/modules/task-manager.js';
-import { enableSilentMode, disableSilentMode } from '../../../../scripts/modules/utils.js';
-import { findTasksJsonPath } from '../utils/path-utils.js';
 import {
-  getAnthropicClientForMCP, 
-  getPerplexityClientForMCP 
+	enableSilentMode,
+	disableSilentMode
+} from '../../../../scripts/modules/utils.js';
+import {
+	getAnthropicClientForMCP,
+	getPerplexityClientForMCP
 } from '../utils/ai-client-utils.js';
 
 /**
  * Direct function wrapper for updating tasks based on new context/prompt.
  *
- * @param {Object} args - Command arguments containing fromId, prompt, useResearch and file path options.
+ * @param {Object} args - Command arguments containing fromId, prompt, useResearch and tasksJsonPath.
  * @param {Object} log - Logger object.
  * @param {Object} context - Context object containing session data.
  * @returns {Promise<Object>} - Result object with success status and data/error information.
  */
 export async function updateTasksDirect(args, log, context = {}) {
-  const { session } = context; // Only extract session, not reportProgress
+	const { session } = context; // Only extract session, not reportProgress
+	const { tasksJsonPath, from, prompt, research } = args;
 
-  try {
-    log.info(`Updating tasks with args: ${JSON.stringify(args)}`);
+	try {
+		log.info(`Updating tasks with args: ${JSON.stringify(args)}`);
 
-    // Check for the common mistake of using 'id' instead of 'from'
-    if (args.id !== undefined && args.from === undefined) {
-      const errorMessage = "You specified 'id' parameter but 'update' requires 'from' parameter. Use 'from' for this tool or use 'update_task' tool if you want to update a single task.";
-      log.error(errorMessage);
-      return { 
-        success: false, 
-        error: { 
-          code: 'PARAMETER_MISMATCH', 
-          message: errorMessage,
-          suggestion: "Use 'from' parameter instead of 'id', or use the 'update_task' tool for single task updates"
-        },
-        fromCache: false 
-      };
-    }
+		// Check if tasksJsonPath was provided
+		if (!tasksJsonPath) {
+			const errorMessage = 'tasksJsonPath is required but was not provided.';
+			log.error(errorMessage);
+			return {
+				success: false,
+				error: { code: 'MISSING_ARGUMENT', message: errorMessage },
+				fromCache: false
+			};
+		}
 
-    // Check required parameters
-    if (!args.from) {
-      const errorMessage = 'No from ID specified. Please provide a task ID to start updating from.';
-      log.error(errorMessage);
-      return { 
-        success: false, 
-        error: { code: 'MISSING_FROM_ID', message: errorMessage },
-        fromCache: false 
-      };
-    }
+		// Check for the common mistake of using 'id' instead of 'from'
+		if (args.id !== undefined && from === undefined) {
+			const errorMessage =
+				"You specified 'id' parameter but 'update' requires 'from' parameter. Use 'from' for this tool or use 'update_task' tool if you want to update a single task.";
+			log.error(errorMessage);
+			return {
+				success: false,
+				error: {
+					code: 'PARAMETER_MISMATCH',
+					message: errorMessage,
+					suggestion:
+						"Use 'from' parameter instead of 'id', or use the 'update_task' tool for single task updates"
+				},
+				fromCache: false
+			};
+		}
 
-    if (!args.prompt) {
-      const errorMessage = 'No prompt specified. Please provide a prompt with new context for task updates.';
-      log.error(errorMessage);
-      return { 
-        success: false, 
-        error: { code: 'MISSING_PROMPT', message: errorMessage },
-        fromCache: false 
-      };
-    }
+		// Check required parameters
+		if (!from) {
+			const errorMessage =
+				'No from ID specified. Please provide a task ID to start updating from.';
+			log.error(errorMessage);
+			return {
+				success: false,
+				error: { code: 'MISSING_FROM_ID', message: errorMessage },
+				fromCache: false
+			};
+		}
 
-    // Parse fromId - handle both string and number values
-    let fromId;
-    if (typeof args.from === 'string') {
-      fromId = parseInt(args.from, 10);
-      if (isNaN(fromId)) {
-        const errorMessage = `Invalid from ID: ${args.from}. Task ID must be a positive integer.`;
-        log.error(errorMessage);
-        return { 
-          success: false, 
-          error: { code: 'INVALID_FROM_ID', message: errorMessage },
-          fromCache: false 
-        };
-      }
-    } else {
-      fromId = args.from;
-    }
+		if (!prompt) {
+			const errorMessage =
+				'No prompt specified. Please provide a prompt with new context for task updates.';
+			log.error(errorMessage);
+			return {
+				success: false,
+				error: { code: 'MISSING_PROMPT', message: errorMessage },
+				fromCache: false
+			};
+		}
 
-    // Get tasks file path
-    let tasksPath;
-    try {
-      tasksPath = findTasksJsonPath(args, log);
-    } catch (error) {
-      log.error(`Error finding tasks file: ${error.message}`);
-      return { 
-        success: false, 
-        error: { code: 'TASKS_FILE_ERROR', message: error.message },
-        fromCache: false 
-      };
-    }
+		// Parse fromId - handle both string and number values
+		let fromId;
+		if (typeof from === 'string') {
+			fromId = parseInt(from, 10);
+			if (isNaN(fromId)) {
+				const errorMessage = `Invalid from ID: ${from}. Task ID must be a positive integer.`;
+				log.error(errorMessage);
+				return {
+					success: false,
+					error: { code: 'INVALID_FROM_ID', message: errorMessage },
+					fromCache: false
+				};
+			}
+		} else {
+			fromId = from;
+		}
 
-    // Get research flag
-    const useResearch = args.research === true;
+		// Get research flag
+		const useResearch = research === true;
 
-    // Initialize appropriate AI client based on research flag
-    let aiClient;
-    try {
-      if (useResearch) {
-        log.info('Using Perplexity AI for research-backed task updates');
-        aiClient = await getPerplexityClientForMCP(session, log);
-      } else {
-        log.info('Using Claude AI for task updates');
-        aiClient = getAnthropicClientForMCP(session, log);
-      }
-    } catch (error) {
-      log.error(`Failed to initialize AI client: ${error.message}`);
-      return {
-        success: false,
-        error: {
-          code: 'AI_CLIENT_ERROR',
-          message: `Cannot initialize AI client: ${error.message}`
-        },
-        fromCache: false
-      };
-    }
+		// Initialize appropriate AI client based on research flag
+		let aiClient;
+		try {
+			if (useResearch) {
+				log.info('Using Perplexity AI for research-backed task updates');
+				aiClient = await getPerplexityClientForMCP(session, log);
+			} else {
+				log.info('Using Claude AI for task updates');
+				aiClient = getAnthropicClientForMCP(session, log);
+			}
+		} catch (error) {
+			log.error(`Failed to initialize AI client: ${error.message}`);
+			return {
+				success: false,
+				error: {
+					code: 'AI_CLIENT_ERROR',
+					message: `Cannot initialize AI client: ${error.message}`
+				},
+				fromCache: false
+			};
+		}
 
-    log.info(`Updating tasks from ID ${fromId} with prompt "${args.prompt}" and research: ${useResearch}`);
+		log.info(
+			`Updating tasks from ID ${fromId} with prompt "${prompt}" and research: ${useResearch}`
+		);
 
-    try {
-      // Enable silent mode to prevent console logs from interfering with JSON response
-      enableSilentMode();
+		// Create the logger wrapper to ensure compatibility with core functions
+		const logWrapper = {
+			info: (message, ...args) => log.info(message, ...args),
+			warn: (message, ...args) => log.warn(message, ...args),
+			error: (message, ...args) => log.error(message, ...args),
+			debug: (message, ...args) => log.debug && log.debug(message, ...args), // Handle optional debug
+			success: (message, ...args) => log.info(message, ...args) // Map success to info if needed
+		};
 
-      // Execute core updateTasks function, passing the AI client and session
-      await updateTasks(
-        tasksPath, 
-        fromId, 
-        args.prompt, 
-        useResearch, 
-        { 
-          mcpLog: log, 
-          session 
-        }
-      );
+		try {
+			// Enable silent mode to prevent console logs from interfering with JSON response
+			enableSilentMode();
 
-      // Since updateTasks doesn't return a value but modifies the tasks file,
-      // we'll return a success message
-      return {
-        success: true,
-        data: {
-          message: `Successfully updated tasks from ID ${fromId} based on the prompt`,
-          fromId,
-          tasksPath,
-          useResearch
-        },
-        fromCache: false // This operation always modifies state and should never be cached
-      };
-    } catch (error) {
-      log.error(`Error updating tasks: ${error.message}`);
-      return { 
-        success: false, 
-        error: { code: 'UPDATE_TASKS_ERROR', message: error.message || 'Unknown error updating tasks' },
-        fromCache: false 
-      };
-    } finally {
-      // Make sure to restore normal logging even if there's an error
-      disableSilentMode();
-    }
-  } catch (error) {
-    // Ensure silent mode is disabled
-    disableSilentMode();
+			// Execute core updateTasks function, passing the AI client and session
+			await updateTasks(tasksJsonPath, fromId, prompt, useResearch, {
+				mcpLog: logWrapper, // Pass the wrapper instead of the raw log object
+				session
+			});
 
-    log.error(`Error updating tasks: ${error.message}`);
-    return { 
-      success: false, 
-      error: { code: 'UPDATE_TASKS_ERROR', message: error.message || 'Unknown error updating tasks' },
-      fromCache: false 
-    };
-  }
+			// Since updateTasks doesn't return a value but modifies the tasks file,
+			// we'll return a success message
+			return {
+				success: true,
+				data: {
+					message: `Successfully updated tasks from ID ${fromId} based on the prompt`,
+					fromId,
+					tasksPath: tasksJsonPath,
+					useResearch
+				},
+				fromCache: false // This operation always modifies state and should never be cached
+			};
+		} catch (error) {
+			log.error(`Error updating tasks: ${error.message}`);
+			return {
+				success: false,
+				error: {
+					code: 'UPDATE_TASKS_ERROR',
+					message: error.message || 'Unknown error updating tasks'
+				},
+				fromCache: false
+			};
+		} finally {
+			// Make sure to restore normal logging even if there's an error
+			disableSilentMode();
+		}
+	} catch (error) {
+		// Ensure silent mode is disabled
+		disableSilentMode();
+
+		log.error(`Error updating tasks: ${error.message}`);
+		return {
+			success: false,
+			error: {
+				code: 'UPDATE_TASKS_ERROR',
+				message: error.message || 'Unknown error updating tasks'
+			},
+			fromCache: false
+		};
+	}
 }

mcp-server/src/core/direct-functions/validate-dependencies.js

@@ -3,63 +3,78 @@
  */
 
 import { validateDependenciesCommand } from '../../../../scripts/modules/dependency-manager.js';
-import { findTasksJsonPath } from '../utils/path-utils.js';
-import { enableSilentMode, disableSilentMode } from '../../../../scripts/modules/utils.js';
+import {
+	enableSilentMode,
+	disableSilentMode
+} from '../../../../scripts/modules/utils.js';
 import fs from 'fs';
 
 /**
  * Validate dependencies in tasks.json
  * @param {Object} args - Function arguments
- * @param {string} [args.file] - Path to the tasks file
- * @param {string} [args.projectRoot] - Project root directory
+ * @param {string} args.tasksJsonPath - Explicit path to the tasks.json file.
  * @param {Object} log - Logger object
  * @returns {Promise<{success: boolean, data?: Object, error?: {code: string, message: string}}>}
  */
 export async function validateDependenciesDirect(args, log) {
-  try {
-    log.info(`Validating dependencies in tasks...`);
+	// Destructure the explicit tasksJsonPath
+	const { tasksJsonPath } = args;
 
-    // Find the tasks.json path
-    const tasksPath = findTasksJsonPath(args, log);
+	if (!tasksJsonPath) {
+		log.error('validateDependenciesDirect called without tasksJsonPath');
+		return {
+			success: false,
+			error: {
+				code: 'MISSING_ARGUMENT',
+				message: 'tasksJsonPath is required'
+			}
+		};
+	}
 
-    // Verify the file exists
-    if (!fs.existsSync(tasksPath)) {
-      return {
-        success: false,
-        error: {
-          code: 'FILE_NOT_FOUND',
-          message: `Tasks file not found at ${tasksPath}`
-        }
-      };
-    }
+	try {
+		log.info(`Validating dependencies in tasks: ${tasksJsonPath}`);
 
-    // Enable silent mode to prevent console logs from interfering with JSON response
-    enableSilentMode();
+		// Use the provided tasksJsonPath
+		const tasksPath = tasksJsonPath;
 
-    // Call the original command function
-    await validateDependenciesCommand(tasksPath);
+		// Verify the file exists
+		if (!fs.existsSync(tasksPath)) {
+			return {
+				success: false,
+				error: {
+					code: 'FILE_NOT_FOUND',
+					message: `Tasks file not found at ${tasksPath}`
+				}
+			};
+		}
 
-    // Restore normal logging
-    disableSilentMode();
+		// Enable silent mode to prevent console logs from interfering with JSON response
+		enableSilentMode();
 
-    return {
-      success: true,
-      data: {
-        message: 'Dependencies validated successfully',
-        tasksPath
-      }
-    };
-  } catch (error) {
-    // Make sure to restore normal logging even if there's an error
-    disableSilentMode();
+		// Call the original command function using the provided tasksPath
+		await validateDependenciesCommand(tasksPath);
 
-    log.error(`Error validating dependencies: ${error.message}`);
-    return {
-      success: false,
-      error: {
-        code: 'VALIDATION_ERROR',
-        message: error.message
-      }
-    };
-  }
+		// Restore normal logging
+		disableSilentMode();
+
+		return {
+			success: true,
+			data: {
+				message: 'Dependencies validated successfully',
+				tasksPath
+			}
+		};
+	} catch (error) {
+		// Make sure to restore normal logging even if there's an error
+		disableSilentMode();
+
+		log.error(`Error validating dependencies: ${error.message}`);
+		return {
+			success: false,
+			error: {
+				code: 'VALIDATION_ERROR',
+				message: error.message
+			}
+		};
+	}
 }

mcp-server/src/core/task-master-core.js

@@ -28,69 +28,71 @@ import { fixDependenciesDirect } from './direct-functions/fix-dependencies.js';
 import { complexityReportDirect } from './direct-functions/complexity-report.js';
 import { addDependencyDirect } from './direct-functions/add-dependency.js';
 import { removeTaskDirect } from './direct-functions/remove-task.js';
+import { initializeProjectDirect } from './direct-functions/initialize-project-direct.js';
 
 // Re-export utility functions
 export { findTasksJsonPath } from './utils/path-utils.js';
 
 // Re-export AI client utilities
 export {
-  getAnthropicClientForMCP, 
-  getPerplexityClientForMCP, 
-  getModelConfig, 
-  getBestAvailableAIModel,
-  handleClaudeError
+	getAnthropicClientForMCP,
+	getPerplexityClientForMCP,
+	getModelConfig,
+	getBestAvailableAIModel,
+	handleClaudeError
 } from './utils/ai-client-utils.js';
 
 // Use Map for potential future enhancements like introspection or dynamic dispatch
 export const directFunctions = new Map([
-  ['listTasksDirect', listTasksDirect],
-  ['getCacheStatsDirect', getCacheStatsDirect],
-  ['parsePRDDirect', parsePRDDirect],
-  ['updateTasksDirect', updateTasksDirect],
-  ['updateTaskByIdDirect', updateTaskByIdDirect],
-  ['updateSubtaskByIdDirect', updateSubtaskByIdDirect],
-  ['generateTaskFilesDirect', generateTaskFilesDirect],
-  ['setTaskStatusDirect', setTaskStatusDirect],
-  ['showTaskDirect', showTaskDirect],
-  ['nextTaskDirect', nextTaskDirect],
-  ['expandTaskDirect', expandTaskDirect],
-  ['addTaskDirect', addTaskDirect],
-  ['addSubtaskDirect', addSubtaskDirect],
-  ['removeSubtaskDirect', removeSubtaskDirect],
-  ['analyzeTaskComplexityDirect', analyzeTaskComplexityDirect],
-  ['clearSubtasksDirect', clearSubtasksDirect],
-  ['expandAllTasksDirect', expandAllTasksDirect],
-  ['removeDependencyDirect', removeDependencyDirect],
-  ['validateDependenciesDirect', validateDependenciesDirect],
-  ['fixDependenciesDirect', fixDependenciesDirect],
-  ['complexityReportDirect', complexityReportDirect],
-  ['addDependencyDirect', addDependencyDirect],
-  ['removeTaskDirect', removeTaskDirect]
+	['listTasksDirect', listTasksDirect],
+	['getCacheStatsDirect', getCacheStatsDirect],
+	['parsePRDDirect', parsePRDDirect],
+	['updateTasksDirect', updateTasksDirect],
+	['updateTaskByIdDirect', updateTaskByIdDirect],
+	['updateSubtaskByIdDirect', updateSubtaskByIdDirect],
+	['generateTaskFilesDirect', generateTaskFilesDirect],
+	['setTaskStatusDirect', setTaskStatusDirect],
+	['showTaskDirect', showTaskDirect],
+	['nextTaskDirect', nextTaskDirect],
+	['expandTaskDirect', expandTaskDirect],
+	['addTaskDirect', addTaskDirect],
+	['addSubtaskDirect', addSubtaskDirect],
+	['removeSubtaskDirect', removeSubtaskDirect],
+	['analyzeTaskComplexityDirect', analyzeTaskComplexityDirect],
+	['clearSubtasksDirect', clearSubtasksDirect],
+	['expandAllTasksDirect', expandAllTasksDirect],
+	['removeDependencyDirect', removeDependencyDirect],
+	['validateDependenciesDirect', validateDependenciesDirect],
+	['fixDependenciesDirect', fixDependenciesDirect],
+	['complexityReportDirect', complexityReportDirect],
+	['addDependencyDirect', addDependencyDirect],
+	['removeTaskDirect', removeTaskDirect]
 ]);
 
 // Re-export all direct function implementations
 export {
-  listTasksDirect,
-  getCacheStatsDirect,
-  parsePRDDirect,
-  updateTasksDirect,
-  updateTaskByIdDirect,
-  updateSubtaskByIdDirect,
-  generateTaskFilesDirect,
-  setTaskStatusDirect,
-  showTaskDirect,
-  nextTaskDirect,
-  expandTaskDirect,
-  addTaskDirect,
-  addSubtaskDirect,
-  removeSubtaskDirect,
-  analyzeTaskComplexityDirect,
-  clearSubtasksDirect,
-  expandAllTasksDirect,
-  removeDependencyDirect,
-  validateDependenciesDirect,
-  fixDependenciesDirect,
-  complexityReportDirect,
-  addDependencyDirect,
-  removeTaskDirect
+	listTasksDirect,
+	getCacheStatsDirect,
+	parsePRDDirect,
+	updateTasksDirect,
+	updateTaskByIdDirect,
+	updateSubtaskByIdDirect,
+	generateTaskFilesDirect,
+	setTaskStatusDirect,
+	showTaskDirect,
+	nextTaskDirect,
+	expandTaskDirect,
+	addTaskDirect,
+	addSubtaskDirect,
+	removeSubtaskDirect,
+	analyzeTaskComplexityDirect,
+	clearSubtasksDirect,
+	expandAllTasksDirect,
+	removeDependencyDirect,
+	validateDependenciesDirect,
+	fixDependenciesDirect,
+	complexityReportDirect,
+	addDependencyDirect,
+	removeTaskDirect,
+	initializeProjectDirect
 };

mcp-server/src/core/utils/ai-client-utils.js

@@ -11,9 +11,9 @@ dotenv.config();
 
 // Default model configuration from CLI environment
 const DEFAULT_MODEL_CONFIG = {
-  model: 'claude-3-7-sonnet-20250219',
-  maxTokens: 64000,
-  temperature: 0.2
+	model: 'claude-3-7-sonnet-20250219',
+	maxTokens: 64000,
+	temperature: 0.2
 };
 
 /**
@@ -24,25 +24,28 @@ const DEFAULT_MODEL_CONFIG = {
  * @throws {Error} If API key is missing
  */
 export function getAnthropicClientForMCP(session, log = console) {
-  try {
-    // Extract API key from session.env or fall back to environment variables
-    const apiKey = session?.env?.ANTHROPIC_API_KEY || process.env.ANTHROPIC_API_KEY;
+	try {
+		// Extract API key from session.env or fall back to environment variables
+		const apiKey =
+			session?.env?.ANTHROPIC_API_KEY || process.env.ANTHROPIC_API_KEY;
 
-    if (!apiKey) {
-      throw new Error('ANTHROPIC_API_KEY not found in session environment or process.env');
-    }
+		if (!apiKey) {
+			throw new Error(
+				'ANTHROPIC_API_KEY not found in session environment or process.env'
+			);
+		}
 
-    // Initialize and return a new Anthropic client
-    return new Anthropic({ 
-      apiKey,
-      defaultHeaders: {
-        'anthropic-beta': 'output-128k-2025-02-19'  // Include header for increased token limit
-      }
-    });
-  } catch (error) {
-    log.error(`Failed to initialize Anthropic client: ${error.message}`);
-    throw error;
-  }
+		// Initialize and return a new Anthropic client
+		return new Anthropic({
+			apiKey,
+			defaultHeaders: {
+				'anthropic-beta': 'output-128k-2025-02-19' // Include header for increased token limit
+			}
+		});
+	} catch (error) {
+		log.error(`Failed to initialize Anthropic client: ${error.message}`);
+		throw error;
+	}
 }
 
 /**
@@ -53,26 +56,29 @@ export function getAnthropicClientForMCP(session, log = console) {
  * @throws {Error} If API key is missing or OpenAI package can't be imported
  */
 export async function getPerplexityClientForMCP(session, log = console) {
-  try {
-    // Extract API key from session.env or fall back to environment variables
-    const apiKey = session?.env?.PERPLEXITY_API_KEY || process.env.PERPLEXITY_API_KEY;
+	try {
+		// Extract API key from session.env or fall back to environment variables
+		const apiKey =
+			session?.env?.PERPLEXITY_API_KEY || process.env.PERPLEXITY_API_KEY;
 
-    if (!apiKey) {
-      throw new Error('PERPLEXITY_API_KEY not found in session environment or process.env');
-    }
+		if (!apiKey) {
+			throw new Error(
+				'PERPLEXITY_API_KEY not found in session environment or process.env'
+			);
+		}
 
-    // Dynamically import OpenAI (it may not be used in all contexts)
-    const { default: OpenAI } = await import('openai');
+		// Dynamically import OpenAI (it may not be used in all contexts)
+		const { default: OpenAI } = await import('openai');
 
-    // Initialize and return a new OpenAI client configured for Perplexity
-    return new OpenAI({
-      apiKey, 
-      baseURL: 'https://api.perplexity.ai'
-    });
-  } catch (error) {
-    log.error(`Failed to initialize Perplexity client: ${error.message}`);
-    throw error;
-  }
+		// Initialize and return a new OpenAI client configured for Perplexity
+		return new OpenAI({
+			apiKey,
+			baseURL: 'https://api.perplexity.ai'
+		});
+	} catch (error) {
+		log.error(`Failed to initialize Perplexity client: ${error.message}`);
+		throw error;
+	}
 }
 
 /**
@@ -82,12 +88,12 @@ export async function getPerplexityClientForMCP(session, log = console) {
  * @returns {Object} Model configuration with model, maxTokens, and temperature
  */
 export function getModelConfig(session, defaults = DEFAULT_MODEL_CONFIG) {
-  // Get values from session or fall back to defaults
-  return {
-    model: session?.env?.MODEL || defaults.model,
-    maxTokens: parseInt(session?.env?.MAX_TOKENS || defaults.maxTokens),
-    temperature: parseFloat(session?.env?.TEMPERATURE || defaults.temperature)
-  };
+	// Get values from session or fall back to defaults
+	return {
+		model: session?.env?.MODEL || defaults.model,
+		maxTokens: parseInt(session?.env?.MAX_TOKENS || defaults.maxTokens),
+		temperature: parseFloat(session?.env?.TEMPERATURE || defaults.temperature)
+	};
 }
 
 /**
@@ -100,59 +106,78 @@ export function getModelConfig(session, defaults = DEFAULT_MODEL_CONFIG) {
  * @returns {Promise<Object>} Selected model info with type and client
  * @throws {Error} If no AI models are available
  */
-export async function getBestAvailableAIModel(session, options = {}, log = console) {
-  const { requiresResearch = false, claudeOverloaded = false } = options;
+export async function getBestAvailableAIModel(
+	session,
+	options = {},
+	log = console
+) {
+	const { requiresResearch = false, claudeOverloaded = false } = options;
 
-  // Test case: When research is needed but no Perplexity, use Claude
-  if (requiresResearch && 
-      !(session?.env?.PERPLEXITY_API_KEY || process.env.PERPLEXITY_API_KEY) && 
-      (session?.env?.ANTHROPIC_API_KEY || process.env.ANTHROPIC_API_KEY)) {
-    try {
-      log.warn('Perplexity not available for research, using Claude');
-      const client = getAnthropicClientForMCP(session, log);
-      return { type: 'claude', client };
-    } catch (error) {
-      log.error(`Claude not available: ${error.message}`);
-      throw new Error('No AI models available for research');
-    }
-  }
+	// Test case: When research is needed but no Perplexity, use Claude
+	if (
+		requiresResearch &&
+		!(session?.env?.PERPLEXITY_API_KEY || process.env.PERPLEXITY_API_KEY) &&
+		(session?.env?.ANTHROPIC_API_KEY || process.env.ANTHROPIC_API_KEY)
+	) {
+		try {
+			log.warn('Perplexity not available for research, using Claude');
+			const client = getAnthropicClientForMCP(session, log);
+			return { type: 'claude', client };
+		} catch (error) {
+			log.error(`Claude not available: ${error.message}`);
+			throw new Error('No AI models available for research');
+		}
+	}
 
-  // Regular path: Perplexity for research when available
-  if (requiresResearch && (session?.env?.PERPLEXITY_API_KEY || process.env.PERPLEXITY_API_KEY)) {
-    try {
-      const client = await getPerplexityClientForMCP(session, log);
-      return { type: 'perplexity', client };
-    } catch (error) {
-      log.warn(`Perplexity not available: ${error.message}`);
-      // Fall through to Claude as backup
-    }
-  }
+	// Regular path: Perplexity for research when available
+	if (
+		requiresResearch &&
+		(session?.env?.PERPLEXITY_API_KEY || process.env.PERPLEXITY_API_KEY)
+	) {
+		try {
+			const client = await getPerplexityClientForMCP(session, log);
+			return { type: 'perplexity', client };
+		} catch (error) {
+			log.warn(`Perplexity not available: ${error.message}`);
+			// Fall through to Claude as backup
+		}
+	}
 
-  // Test case: Claude for overloaded scenario
-  if (claudeOverloaded && (session?.env?.ANTHROPIC_API_KEY || process.env.ANTHROPIC_API_KEY)) {
-    try {
-      log.warn('Claude is overloaded but no alternatives are available. Proceeding with Claude anyway.');
-      const client = getAnthropicClientForMCP(session, log);
-      return { type: 'claude', client };
-    } catch (error) {
-      log.error(`Claude not available despite being overloaded: ${error.message}`);
-      throw new Error('No AI models available');
-    }
-  }
+	// Test case: Claude for overloaded scenario
+	if (
+		claudeOverloaded &&
+		(session?.env?.ANTHROPIC_API_KEY || process.env.ANTHROPIC_API_KEY)
+	) {
+		try {
+			log.warn(
+				'Claude is overloaded but no alternatives are available. Proceeding with Claude anyway.'
+			);
+			const client = getAnthropicClientForMCP(session, log);
+			return { type: 'claude', client };
+		} catch (error) {
+			log.error(
+				`Claude not available despite being overloaded: ${error.message}`
+			);
+			throw new Error('No AI models available');
+		}
+	}
 
-  // Default case: Use Claude when available and not overloaded
-  if (!claudeOverloaded && (session?.env?.ANTHROPIC_API_KEY || process.env.ANTHROPIC_API_KEY)) {
-    try {
-      const client = getAnthropicClientForMCP(session, log);
-      return { type: 'claude', client };
-    } catch (error) {
-      log.warn(`Claude not available: ${error.message}`);
-      // Fall through to error if no other options
-    }
-  }
+	// Default case: Use Claude when available and not overloaded
+	if (
+		!claudeOverloaded &&
+		(session?.env?.ANTHROPIC_API_KEY || process.env.ANTHROPIC_API_KEY)
+	) {
+		try {
+			const client = getAnthropicClientForMCP(session, log);
+			return { type: 'claude', client };
+		} catch (error) {
+			log.warn(`Claude not available: ${error.message}`);
+			// Fall through to error if no other options
+		}
+	}
 
-  // If we got here, no models were successfully initialized
-  throw new Error('No AI models available. Please check your API keys.');
+	// If we got here, no models were successfully initialized
+	throw new Error('No AI models available. Please check your API keys.');
 }
 
 /**
@@ -161,28 +186,28 @@ export async function getBestAvailableAIModel(session, options = {}, log = conso
  * @returns {string} User-friendly error message
  */
 export function handleClaudeError(error) {
-  // Check if it's a structured error response
-  if (error.type === 'error' && error.error) {
-    switch (error.error.type) {
-      case 'overloaded_error':
-        return 'Claude is currently experiencing high demand and is overloaded. Please wait a few minutes and try again.';
-      case 'rate_limit_error':
-        return 'You have exceeded the rate limit. Please wait a few minutes before making more requests.';
-      case 'invalid_request_error':
-        return 'There was an issue with the request format. If this persists, please report it as a bug.';
-      default:
-        return `Claude API error: ${error.error.message}`;
-    }
-  }
+	// Check if it's a structured error response
+	if (error.type === 'error' && error.error) {
+		switch (error.error.type) {
+			case 'overloaded_error':
+				return 'Claude is currently experiencing high demand and is overloaded. Please wait a few minutes and try again.';
+			case 'rate_limit_error':
+				return 'You have exceeded the rate limit. Please wait a few minutes before making more requests.';
+			case 'invalid_request_error':
+				return 'There was an issue with the request format. If this persists, please report it as a bug.';
+			default:
+				return `Claude API error: ${error.error.message}`;
+		}
+	}
 
-  // Check for network/timeout errors
-  if (error.message?.toLowerCase().includes('timeout')) {
-    return 'The request to Claude timed out. Please try again.';
-  }
-  if (error.message?.toLowerCase().includes('network')) {
-    return 'There was a network error connecting to Claude. Please check your internet connection and try again.';
-  }
+	// Check for network/timeout errors
+	if (error.message?.toLowerCase().includes('timeout')) {
+		return 'The request to Claude timed out. Please try again.';
+	}
+	if (error.message?.toLowerCase().includes('network')) {
+		return 'There was a network error connecting to Claude. Please check your internet connection and try again.';
+	}
 
-  // Default error message
-  return `Error communicating with Claude: ${error.message}`;
+	// Default error message
+	return `Error communicating with Claude: ${error.message}`;
 }

mcp-server/src/core/utils/async-manager.js

@@ -1,213 +1,247 @@
 import { v4 as uuidv4 } from 'uuid';
 
 class AsyncOperationManager {
-    constructor() {
-        this.operations = new Map(); // Stores active operation state
-        this.completedOperations = new Map(); // Stores completed operations
-        this.maxCompletedOperations = 100; // Maximum number of completed operations to store
-        this.listeners = new Map(); // For potential future notifications
-    }
+	constructor() {
+		this.operations = new Map(); // Stores active operation state
+		this.completedOperations = new Map(); // Stores completed operations
+		this.maxCompletedOperations = 100; // Maximum number of completed operations to store
+		this.listeners = new Map(); // For potential future notifications
+	}
 
-    /**
-     * Adds an operation to be executed asynchronously.
-     * @param {Function} operationFn - The async function to execute (e.g., a Direct function).
-     * @param {Object} args - Arguments to pass to the operationFn.
-     * @param {Object} context - The MCP tool context { log, reportProgress, session }.
-     * @returns {string} The unique ID assigned to this operation.
-     */
-    addOperation(operationFn, args, context) {
-        const operationId = `op-${uuidv4()}`;
-        const operation = {
-            id: operationId,
-            status: 'pending',
-            startTime: Date.now(),
-            endTime: null,
-            result: null,
-            error: null,
-            // Store necessary parts of context, especially log for background execution
-            log: context.log, 
-            reportProgress: context.reportProgress, // Pass reportProgress through
-            session: context.session // Pass session through if needed by the operationFn
-        };
-        this.operations.set(operationId, operation);
-        this.log(operationId, 'info', `Operation added.`);
+	/**
+	 * Adds an operation to be executed asynchronously.
+	 * @param {Function} operationFn - The async function to execute (e.g., a Direct function).
+	 * @param {Object} args - Arguments to pass to the operationFn.
+	 * @param {Object} context - The MCP tool context { log, reportProgress, session }.
+	 * @returns {string} The unique ID assigned to this operation.
+	 */
+	addOperation(operationFn, args, context) {
+		const operationId = `op-${uuidv4()}`;
+		const operation = {
+			id: operationId,
+			status: 'pending',
+			startTime: Date.now(),
+			endTime: null,
+			result: null,
+			error: null,
+			// Store necessary parts of context, especially log for background execution
+			log: context.log,
+			reportProgress: context.reportProgress, // Pass reportProgress through
+			session: context.session // Pass session through if needed by the operationFn
+		};
+		this.operations.set(operationId, operation);
+		this.log(operationId, 'info', `Operation added.`);
 
-        // Start execution in the background (don't await here)
-        this._runOperation(operationId, operationFn, args, context).catch(err => {
-            // Catch unexpected errors during the async execution setup itself
-             this.log(operationId, 'error', `Critical error starting operation: ${err.message}`, { stack: err.stack });
-             operation.status = 'failed';
-             operation.error = { code: 'MANAGER_EXECUTION_ERROR', message: err.message };
-             operation.endTime = Date.now();
+		// Start execution in the background (don't await here)
+		this._runOperation(operationId, operationFn, args, context).catch((err) => {
+			// Catch unexpected errors during the async execution setup itself
+			this.log(
+				operationId,
+				'error',
+				`Critical error starting operation: ${err.message}`,
+				{ stack: err.stack }
+			);
+			operation.status = 'failed';
+			operation.error = {
+				code: 'MANAGER_EXECUTION_ERROR',
+				message: err.message
+			};
+			operation.endTime = Date.now();
 
-             // Move to completed operations
-             this._moveToCompleted(operationId);
-        });
+			// Move to completed operations
+			this._moveToCompleted(operationId);
+		});
 
-        return operationId;
-    }
+		return operationId;
+	}
 
-    /**
-     * Internal function to execute the operation.
-     * @param {string} operationId - The ID of the operation.
-     * @param {Function} operationFn - The async function to execute.
-     * @param {Object} args - Arguments for the function.
-     * @param {Object} context - The original MCP tool context.
-     */
-    async _runOperation(operationId, operationFn, args, context) {
-        const operation = this.operations.get(operationId);
-        if (!operation) return; // Should not happen
+	/**
+	 * Internal function to execute the operation.
+	 * @param {string} operationId - The ID of the operation.
+	 * @param {Function} operationFn - The async function to execute.
+	 * @param {Object} args - Arguments for the function.
+	 * @param {Object} context - The original MCP tool context.
+	 */
+	async _runOperation(operationId, operationFn, args, context) {
+		const operation = this.operations.get(operationId);
+		if (!operation) return; // Should not happen
 
-        operation.status = 'running';
-        this.log(operationId, 'info', `Operation running.`);
-        this.emit('statusChanged', { operationId, status: 'running' });
+		operation.status = 'running';
+		this.log(operationId, 'info', `Operation running.`);
+		this.emit('statusChanged', { operationId, status: 'running' });
 
-        try {
-            // Pass the necessary context parts to the direct function
-            // The direct function needs to be adapted if it needs reportProgress
-            // We pass the original context's log, plus our wrapped reportProgress
-            const result = await operationFn(args, operation.log, { 
-                reportProgress: (progress) => this._handleProgress(operationId, progress), 
-                mcpLog: operation.log, // Pass log as mcpLog if direct fn expects it
-                session: operation.session 
-            });
+		try {
+			// Pass the necessary context parts to the direct function
+			// The direct function needs to be adapted if it needs reportProgress
+			// We pass the original context's log, plus our wrapped reportProgress
+			const result = await operationFn(args, operation.log, {
+				reportProgress: (progress) =>
+					this._handleProgress(operationId, progress),
+				mcpLog: operation.log, // Pass log as mcpLog if direct fn expects it
+				session: operation.session
+			});
 
-            operation.status = result.success ? 'completed' : 'failed';
-            operation.result = result.success ? result.data : null;
-            operation.error = result.success ? null : result.error;
-            this.log(operationId, 'info', `Operation finished with status: ${operation.status}`);
+			operation.status = result.success ? 'completed' : 'failed';
+			operation.result = result.success ? result.data : null;
+			operation.error = result.success ? null : result.error;
+			this.log(
+				operationId,
+				'info',
+				`Operation finished with status: ${operation.status}`
+			);
+		} catch (error) {
+			this.log(
+				operationId,
+				'error',
+				`Operation failed with error: ${error.message}`,
+				{ stack: error.stack }
+			);
+			operation.status = 'failed';
+			operation.error = {
+				code: 'OPERATION_EXECUTION_ERROR',
+				message: error.message
+			};
+		} finally {
+			operation.endTime = Date.now();
+			this.emit('statusChanged', {
+				operationId,
+				status: operation.status,
+				result: operation.result,
+				error: operation.error
+			});
 
-        } catch (error) {
-            this.log(operationId, 'error', `Operation failed with error: ${error.message}`, { stack: error.stack });
-            operation.status = 'failed';
-            operation.error = { code: 'OPERATION_EXECUTION_ERROR', message: error.message };
-        } finally {
-            operation.endTime = Date.now();
-            this.emit('statusChanged', { operationId, status: operation.status, result: operation.result, error: operation.error });
+			// Move to completed operations if done or failed
+			if (operation.status === 'completed' || operation.status === 'failed') {
+				this._moveToCompleted(operationId);
+			}
+		}
+	}
 
-            // Move to completed operations if done or failed
-            if (operation.status === 'completed' || operation.status === 'failed') {
-                this._moveToCompleted(operationId);
-            }
-        }
-    }
+	/**
+	 * Move an operation from active operations to completed operations history.
+	 * @param {string} operationId - The ID of the operation to move.
+	 * @private
+	 */
+	_moveToCompleted(operationId) {
+		const operation = this.operations.get(operationId);
+		if (!operation) return;
 
-    /**
-     * Move an operation from active operations to completed operations history.
-     * @param {string} operationId - The ID of the operation to move.
-     * @private
-     */
-    _moveToCompleted(operationId) {
-        const operation = this.operations.get(operationId);
-        if (!operation) return;
+		// Store only the necessary data in completed operations
+		const completedData = {
+			id: operation.id,
+			status: operation.status,
+			startTime: operation.startTime,
+			endTime: operation.endTime,
+			result: operation.result,
+			error: operation.error
+		};
 
-        // Store only the necessary data in completed operations
-        const completedData = {
-            id: operation.id,
-            status: operation.status,
-            startTime: operation.startTime,
-            endTime: operation.endTime,
-            result: operation.result,
-            error: operation.error,
-        };
+		this.completedOperations.set(operationId, completedData);
+		this.operations.delete(operationId);
 
-        this.completedOperations.set(operationId, completedData);
-        this.operations.delete(operationId);
+		// Trim completed operations if exceeding maximum
+		if (this.completedOperations.size > this.maxCompletedOperations) {
+			// Get the oldest operation (sorted by endTime)
+			const oldest = [...this.completedOperations.entries()].sort(
+				(a, b) => a[1].endTime - b[1].endTime
+			)[0];
 
-        // Trim completed operations if exceeding maximum
-        if (this.completedOperations.size > this.maxCompletedOperations) {
-            // Get the oldest operation (sorted by endTime)
-            const oldest = [...this.completedOperations.entries()]
-                .sort((a, b) => a[1].endTime - b[1].endTime)[0];
+			if (oldest) {
+				this.completedOperations.delete(oldest[0]);
+			}
+		}
+	}
 
-            if (oldest) {
-                this.completedOperations.delete(oldest[0]);
-            }
-        }
-    }
+	/**
+	 * Handles progress updates from the running operation and forwards them.
+	 * @param {string} operationId - The ID of the operation reporting progress.
+	 * @param {Object} progress - The progress object { progress, total? }.
+	 */
+	_handleProgress(operationId, progress) {
+		const operation = this.operations.get(operationId);
+		if (operation && operation.reportProgress) {
+			try {
+				// Use the reportProgress function captured from the original context
+				operation.reportProgress(progress);
+				this.log(
+					operationId,
+					'debug',
+					`Reported progress: ${JSON.stringify(progress)}`
+				);
+			} catch (err) {
+				this.log(
+					operationId,
+					'warn',
+					`Failed to report progress: ${err.message}`
+				);
+				// Don't stop the operation, just log the reporting failure
+			}
+		}
+	}
 
-    /**
-     * Handles progress updates from the running operation and forwards them.
-     * @param {string} operationId - The ID of the operation reporting progress.
-     * @param {Object} progress - The progress object { progress, total? }.
-     */
-    _handleProgress(operationId, progress) {
-        const operation = this.operations.get(operationId);
-        if (operation && operation.reportProgress) {
-            try {
-                 // Use the reportProgress function captured from the original context
-                operation.reportProgress(progress); 
-                this.log(operationId, 'debug', `Reported progress: ${JSON.stringify(progress)}`);
-            } catch(err) {
-                this.log(operationId, 'warn', `Failed to report progress: ${err.message}`);
-                // Don't stop the operation, just log the reporting failure
-            }
-        }
-     }
+	/**
+	 * Retrieves the status and result/error of an operation.
+	 * @param {string} operationId - The ID of the operation.
+	 * @returns {Object | null} The operation details or null if not found.
+	 */
+	getStatus(operationId) {
+		// First check active operations
+		const operation = this.operations.get(operationId);
+		if (operation) {
+			return {
+				id: operation.id,
+				status: operation.status,
+				startTime: operation.startTime,
+				endTime: operation.endTime,
+				result: operation.result,
+				error: operation.error
+			};
+		}
 
-    /**
-     * Retrieves the status and result/error of an operation.
-     * @param {string} operationId - The ID of the operation.
-     * @returns {Object | null} The operation details or null if not found.
-     */
-    getStatus(operationId) {
-        // First check active operations
-        const operation = this.operations.get(operationId);
-        if (operation) {
-            return {
-                id: operation.id,
-                status: operation.status,
-                startTime: operation.startTime,
-                endTime: operation.endTime,
-                result: operation.result,
-                error: operation.error,
-            };
-        }
+		// Then check completed operations
+		const completedOperation = this.completedOperations.get(operationId);
+		if (completedOperation) {
+			return completedOperation;
+		}
 
-        // Then check completed operations
-        const completedOperation = this.completedOperations.get(operationId);
-        if (completedOperation) {
-            return completedOperation;
-        }
+		// Operation not found in either active or completed
+		return {
+			error: {
+				code: 'OPERATION_NOT_FOUND',
+				message: `Operation ID ${operationId} not found. It may have been completed and removed from history, or the ID may be invalid.`
+			},
+			status: 'not_found'
+		};
+	}
 
-        // Operation not found in either active or completed
-        return {
-            error: {
-                code: 'OPERATION_NOT_FOUND',
-                message: `Operation ID ${operationId} not found. It may have been completed and removed from history, or the ID may be invalid.`
-            },
-            status: 'not_found'
-        };
-    }
+	/**
+	 * Internal logging helper to prefix logs with the operation ID.
+	 * @param {string} operationId - The ID of the operation.
+	 * @param {'info'|'warn'|'error'|'debug'} level - Log level.
+	 * @param {string} message - Log message.
+	 * @param {Object} [meta] - Additional metadata.
+	 */
+	log(operationId, level, message, meta = {}) {
+		const operation = this.operations.get(operationId);
+		// Use the logger instance associated with the operation if available, otherwise console
+		const logger = operation?.log || console;
+		const logFn = logger[level] || logger.log || console.log; // Fallback
+		logFn(`[AsyncOp ${operationId}] ${message}`, meta);
+	}
 
-     /**
-     * Internal logging helper to prefix logs with the operation ID.
-     * @param {string} operationId - The ID of the operation.
-     * @param {'info'|'warn'|'error'|'debug'} level - Log level.
-     * @param {string} message - Log message.
-     * @param {Object} [meta] - Additional metadata.
-     */
-    log(operationId, level, message, meta = {}) {
-         const operation = this.operations.get(operationId);
-         // Use the logger instance associated with the operation if available, otherwise console
-         const logger = operation?.log || console;
-         const logFn = logger[level] || logger.log || console.log; // Fallback
-         logFn(`[AsyncOp ${operationId}] ${message}`, meta);
-     }
+	// --- Basic Event Emitter ---
+	on(eventName, listener) {
+		if (!this.listeners.has(eventName)) {
+			this.listeners.set(eventName, []);
+		}
+		this.listeners.get(eventName).push(listener);
+	}
 
-    // --- Basic Event Emitter ---
-    on(eventName, listener) {
-        if (!this.listeners.has(eventName)) {
-            this.listeners.set(eventName, []);
-        }
-        this.listeners.get(eventName).push(listener);
-    }
-
-    emit(eventName, data) {
-        if (this.listeners.has(eventName)) {
-            this.listeners.get(eventName).forEach(listener => listener(data));
-        }
-    }
+	emit(eventName, data) {
+		if (this.listeners.has(eventName)) {
+			this.listeners.get(eventName).forEach((listener) => listener(data));
+		}
+	}
 }
 
 // Export a singleton instance

mcp-server/src/core/utils/env-utils.js

@@ -6,38 +6,42 @@
  * @returns {Promise<any>} The result of the actionFn.
  */
 export async function withSessionEnv(sessionEnv, actionFn) {
-    if (!sessionEnv || typeof sessionEnv !== 'object' || Object.keys(sessionEnv).length === 0) {
-      // If no sessionEnv is provided, just run the action directly
-      return await actionFn();
-    }
+	if (
+		!sessionEnv ||
+		typeof sessionEnv !== 'object' ||
+		Object.keys(sessionEnv).length === 0
+	) {
+		// If no sessionEnv is provided, just run the action directly
+		return await actionFn();
+	}
 
-    const originalEnv = {};
-    const keysToRestore = [];
+	const originalEnv = {};
+	const keysToRestore = [];
 
-    // Set environment variables from sessionEnv
-    for (const key in sessionEnv) {
-      if (Object.prototype.hasOwnProperty.call(sessionEnv, key)) {
-        // Store original value if it exists, otherwise mark for deletion
-        if (process.env[key] !== undefined) {
-          originalEnv[key] = process.env[key];
-        }
-        keysToRestore.push(key);
-        process.env[key] = sessionEnv[key];
-      }
-    }
+	// Set environment variables from sessionEnv
+	for (const key in sessionEnv) {
+		if (Object.prototype.hasOwnProperty.call(sessionEnv, key)) {
+			// Store original value if it exists, otherwise mark for deletion
+			if (process.env[key] !== undefined) {
+				originalEnv[key] = process.env[key];
+			}
+			keysToRestore.push(key);
+			process.env[key] = sessionEnv[key];
+		}
+	}
 
-    try {
-      // Execute the provided action function
-      return await actionFn();
-    } finally {
-      // Restore original environment variables
-      for (const key of keysToRestore) {
-        if (Object.prototype.hasOwnProperty.call(originalEnv, key)) {
-          process.env[key] = originalEnv[key];
-        } else {
-          // If the key didn't exist originally, delete it
-          delete process.env[key];
-        }
-      }
-    }
-  } 
+	try {
+		// Execute the provided action function
+		return await actionFn();
+	} finally {
+		// Restore original environment variables
+		for (const key of keysToRestore) {
+			if (Object.prototype.hasOwnProperty.call(originalEnv, key)) {
+				process.env[key] = originalEnv[key];
+			} else {
+				// If the key didn't exist originally, delete it
+				delete process.env[key];
+			}
+		}
+	}
+}

mcp-server/src/core/utils/path-utils.js

@@ -18,43 +18,43 @@ export let lastFoundProjectRoot = null;
 
 // Project marker files that indicate a potential project root
 export const PROJECT_MARKERS = [
-  // Task Master specific
-  'tasks.json',
-  'tasks/tasks.json',
+	// Task Master specific
+	'tasks.json',
+	'tasks/tasks.json',
 
-  // Common version control
-  '.git',
-  '.svn',
+	// Common version control
+	'.git',
+	'.svn',
 
-  // Common package files
-  'package.json',
-  'pyproject.toml',
-  'Gemfile',
-  'go.mod',
-  'Cargo.toml',
+	// Common package files
+	'package.json',
+	'pyproject.toml',
+	'Gemfile',
+	'go.mod',
+	'Cargo.toml',
 
-  // Common IDE/editor folders
-  '.cursor',
-  '.vscode',
-  '.idea',
+	// Common IDE/editor folders
+	'.cursor',
+	'.vscode',
+	'.idea',
 
-  // Common dependency directories (check if directory)
-  'node_modules',
-  'venv',
-  '.venv',
+	// Common dependency directories (check if directory)
+	'node_modules',
+	'venv',
+	'.venv',
 
-  // Common config files
-  '.env',
-  '.eslintrc',
-  'tsconfig.json',
-  'babel.config.js',
-  'jest.config.js',
-  'webpack.config.js',
+	// Common config files
+	'.env',
+	'.eslintrc',
+	'tsconfig.json',
+	'babel.config.js',
+	'jest.config.js',
+	'webpack.config.js',
 
-  // Common CI/CD files
-  '.github/workflows',
-  '.gitlab-ci.yml',
-  '.circleci/config.yml'
+	// Common CI/CD files
+	'.github/workflows',
+	'.gitlab-ci.yml',
+	'.circleci/config.yml'
 ];
 
 /**
@@ -63,15 +63,15 @@ export const PROJECT_MARKERS = [
  * @returns {string} - Absolute path to the package installation directory
  */
 export function getPackagePath() {
-  // When running from source, __dirname is the directory containing this file
-  // When running from npm, we need to find the package root
-  const thisFilePath = fileURLToPath(import.meta.url);
-  const thisFileDir = path.dirname(thisFilePath);
+	// When running from source, __dirname is the directory containing this file
+	// When running from npm, we need to find the package root
+	const thisFilePath = fileURLToPath(import.meta.url);
+	const thisFileDir = path.dirname(thisFilePath);
 
-  // Navigate from core/utils up to the package root
-  // In dev: /path/to/task-master/mcp-server/src/core/utils -> /path/to/task-master
-  // In npm: /path/to/node_modules/task-master/mcp-server/src/core/utils -> /path/to/node_modules/task-master
-  return path.resolve(thisFileDir, '../../../../');
+	// Navigate from core/utils up to the package root
+	// In dev: /path/to/task-master/mcp-server/src/core/utils -> /path/to/task-master
+	// In npm: /path/to/node_modules/task-master/mcp-server/src/core/utils -> /path/to/node_modules/task-master
+	return path.resolve(thisFileDir, '../../../../');
 }
 
 /**
@@ -82,62 +82,73 @@ export function getPackagePath() {
  * @throws {Error} - If tasks.json cannot be found.
  */
 export function findTasksJsonPath(args, log) {
-  // PRECEDENCE ORDER for finding tasks.json:
-  // 1. Explicitly provided `projectRoot` in args (Highest priority, expected in MCP context)
-  // 2. Previously found/cached `lastFoundProjectRoot` (primarily for CLI performance)
-  // 3. Search upwards from current working directory (`process.cwd()`) - CLI usage
+	// PRECEDENCE ORDER for finding tasks.json:
+	// 1. Explicitly provided `projectRoot` in args (Highest priority, expected in MCP context)
+	// 2. Previously found/cached `lastFoundProjectRoot` (primarily for CLI performance)
+	// 3. Search upwards from current working directory (`process.cwd()`) - CLI usage
 
-  // 1. If project root is explicitly provided (e.g., from MCP session), use it directly
-  if (args.projectRoot) {
-    const projectRoot = args.projectRoot;
-    log.info(`Using explicitly provided project root: ${projectRoot}`);
-    try {
-      // This will throw if tasks.json isn't found within this root
-      return findTasksJsonInDirectory(projectRoot, args.file, log); 
-    } catch (error) {
-      // Include debug info in error
-      const debugInfo = {
-        projectRoot,
-        currentDir: process.cwd(),
-        serverDir: path.dirname(process.argv[1]),
-        possibleProjectRoot: path.resolve(path.dirname(process.argv[1]), '../..'),
-        lastFoundProjectRoot,
-        searchedPaths: error.message
-      };
+	// 1. If project root is explicitly provided (e.g., from MCP session), use it directly
+	if (args.projectRoot) {
+		const projectRoot = args.projectRoot;
+		log.info(`Using explicitly provided project root: ${projectRoot}`);
+		try {
+			// This will throw if tasks.json isn't found within this root
+			return findTasksJsonInDirectory(projectRoot, args.file, log);
+		} catch (error) {
+			// Include debug info in error
+			const debugInfo = {
+				projectRoot,
+				currentDir: process.cwd(),
+				serverDir: path.dirname(process.argv[1]),
+				possibleProjectRoot: path.resolve(
+					path.dirname(process.argv[1]),
+					'../..'
+				),
+				lastFoundProjectRoot,
+				searchedPaths: error.message
+			};
 
-      error.message = `Tasks file not found in any of the expected locations relative to project root "${projectRoot}" (from session).\nDebug Info: ${JSON.stringify(debugInfo, null, 2)}`;
-      throw error;
-    }
-  }
+			error.message = `Tasks file not found in any of the expected locations relative to project root "${projectRoot}" (from session).\nDebug Info: ${JSON.stringify(debugInfo, null, 2)}`;
+			throw error;
+		}
+	}
 
-  // --- Fallback logic primarily for CLI or when projectRoot isn't passed --- 
+	// --- Fallback logic primarily for CLI or when projectRoot isn't passed ---
 
-  // 2. If we have a last known project root that worked, try it first
-  if (lastFoundProjectRoot) {
-    log.info(`Trying last known project root: ${lastFoundProjectRoot}`);
-    try {
-      // Use the cached root
-      const tasksPath = findTasksJsonInDirectory(lastFoundProjectRoot, args.file, log); 
-      return tasksPath; // Return if found in cached root
-    } catch (error) {
-      log.info(`Task file not found in last known project root, continuing search.`);
-      // Continue with search if not found in cache
-    }
-  }
+	// 2. If we have a last known project root that worked, try it first
+	if (lastFoundProjectRoot) {
+		log.info(`Trying last known project root: ${lastFoundProjectRoot}`);
+		try {
+			// Use the cached root
+			const tasksPath = findTasksJsonInDirectory(
+				lastFoundProjectRoot,
+				args.file,
+				log
+			);
+			return tasksPath; // Return if found in cached root
+		} catch (error) {
+			log.info(
+				`Task file not found in last known project root, continuing search.`
+			);
+			// Continue with search if not found in cache
+		}
+	}
 
-  // 3. Start search from current directory (most common CLI scenario)
-  const startDir = process.cwd();
-  log.info(`Searching for tasks.json starting from current directory: ${startDir}`);
+	// 3. Start search from current directory (most common CLI scenario)
+	const startDir = process.cwd();
+	log.info(
+		`Searching for tasks.json starting from current directory: ${startDir}`
+	);
 
-  // Try to find tasks.json by walking up the directory tree from cwd
-  try {
-    // This will throw if not found in the CWD tree
-    return findTasksJsonWithParentSearch(startDir, args.file, log); 
-  } catch (error) {
-    // If all attempts fail, augment and throw the original error from CWD search
-    error.message = `${error.message}\n\nPossible solutions:\n1. Run the command from your project directory containing tasks.json\n2. Use --project-root=/path/to/project to specify the project location (if using CLI)\n3. Ensure the project root is correctly passed from the client (if using MCP)\n\nCurrent working directory: ${startDir}\nLast known project root: ${lastFoundProjectRoot}\nProject root from args: ${args.projectRoot}`;
-    throw error;
-  }
+	// Try to find tasks.json by walking up the directory tree from cwd
+	try {
+		// This will throw if not found in the CWD tree
+		return findTasksJsonWithParentSearch(startDir, args.file, log);
+	} catch (error) {
+		// If all attempts fail, augment and throw the original error from CWD search
+		error.message = `${error.message}\n\nPossible solutions:\n1. Run the command from your project directory containing tasks.json\n2. Use --project-root=/path/to/project to specify the project location (if using CLI)\n3. Ensure the project root is correctly passed from the client (if using MCP)\n\nCurrent working directory: ${startDir}\nLast known project root: ${lastFoundProjectRoot}\nProject root from args: ${args.projectRoot}`;
+		throw error;
+	}
 }
 
 /**
@@ -146,11 +157,11 @@ export function findTasksJsonPath(args, log) {
  * @returns {boolean} - True if the directory contains any project markers
  */
 function hasProjectMarkers(dirPath) {
-  return PROJECT_MARKERS.some(marker => {
-    const markerPath = path.join(dirPath, marker);
-    // Check if the marker exists as either a file or directory
-    return fs.existsSync(markerPath);
-  });
+	return PROJECT_MARKERS.some((marker) => {
+		const markerPath = path.join(dirPath, marker);
+		// Check if the marker exists as either a file or directory
+		return fs.existsSync(markerPath);
+	});
 }
 
 /**
@@ -162,39 +173,41 @@ function hasProjectMarkers(dirPath) {
  * @throws {Error} - If tasks.json cannot be found
  */
 function findTasksJsonInDirectory(dirPath, explicitFilePath, log) {
-  const possiblePaths = [];
+	const possiblePaths = [];
 
-  // 1. If a file is explicitly provided relative to dirPath
-  if (explicitFilePath) {
-    possiblePaths.push(path.resolve(dirPath, explicitFilePath));
-  }
+	// 1. If a file is explicitly provided relative to dirPath
+	if (explicitFilePath) {
+		possiblePaths.push(path.resolve(dirPath, explicitFilePath));
+	}
 
-  // 2. Check the standard locations relative to dirPath
-  possiblePaths.push(
-    path.join(dirPath, 'tasks.json'),
-    path.join(dirPath, 'tasks', 'tasks.json')
-  );
+	// 2. Check the standard locations relative to dirPath
+	possiblePaths.push(
+		path.join(dirPath, 'tasks.json'),
+		path.join(dirPath, 'tasks', 'tasks.json')
+	);
 
-  log.info(`Checking potential task file paths: ${possiblePaths.join(', ')}`);
+	log.info(`Checking potential task file paths: ${possiblePaths.join(', ')}`);
 
-  // Find the first existing path
-  for (const p of possiblePaths) {
-    log.info(`Checking if exists: ${p}`);
-    const exists = fs.existsSync(p);
-    log.info(`Path ${p} exists: ${exists}`);
+	// Find the first existing path
+	for (const p of possiblePaths) {
+		log.info(`Checking if exists: ${p}`);
+		const exists = fs.existsSync(p);
+		log.info(`Path ${p} exists: ${exists}`);
 
-    if (exists) {
-      log.info(`Found tasks file at: ${p}`);
-      // Store the project root for future use
-      lastFoundProjectRoot = dirPath;
-      return p;
-    }
-  }
+		if (exists) {
+			log.info(`Found tasks file at: ${p}`);
+			// Store the project root for future use
+			lastFoundProjectRoot = dirPath;
+			return p;
+		}
+	}
 
-  // If no file was found, throw an error
-  const error = new Error(`Tasks file not found in any of the expected locations relative to ${dirPath}: ${possiblePaths.join(', ')}`);
-  error.code = 'TASKS_FILE_NOT_FOUND';
-  throw error;
+	// If no file was found, throw an error
+	const error = new Error(
+		`Tasks file not found in any of the expected locations relative to ${dirPath}: ${possiblePaths.join(', ')}`
+	);
+	error.code = 'TASKS_FILE_NOT_FOUND';
+	throw error;
 }
 
 /**
@@ -207,66 +220,174 @@ function findTasksJsonInDirectory(dirPath, explicitFilePath, log) {
  * @throws {Error} - If tasks.json cannot be found in any parent directory
  */
 function findTasksJsonWithParentSearch(startDir, explicitFilePath, log) {
-  let currentDir = startDir;
-  const rootDir = path.parse(currentDir).root;
+	let currentDir = startDir;
+	const rootDir = path.parse(currentDir).root;
 
-  // Keep traversing up until we hit the root directory
-  while (currentDir !== rootDir) {
-    // First check for tasks.json directly
-    try {
-      return findTasksJsonInDirectory(currentDir, explicitFilePath, log);
-    } catch (error) {
-      // If tasks.json not found but the directory has project markers,
-      // log it as a potential project root (helpful for debugging)
-      if (hasProjectMarkers(currentDir)) {
-        log.info(`Found project markers in ${currentDir}, but no tasks.json`);
-      }
+	// Keep traversing up until we hit the root directory
+	while (currentDir !== rootDir) {
+		// First check for tasks.json directly
+		try {
+			return findTasksJsonInDirectory(currentDir, explicitFilePath, log);
+		} catch (error) {
+			// If tasks.json not found but the directory has project markers,
+			// log it as a potential project root (helpful for debugging)
+			if (hasProjectMarkers(currentDir)) {
+				log.info(`Found project markers in ${currentDir}, but no tasks.json`);
+			}
 
-      // Move up to parent directory
-      const parentDir = path.dirname(currentDir);
+			// Move up to parent directory
+			const parentDir = path.dirname(currentDir);
 
-      // Check if we've reached the root
-      if (parentDir === currentDir) {
-        break;
-      }
+			// Check if we've reached the root
+			if (parentDir === currentDir) {
+				break;
+			}
 
-      log.info(`Tasks file not found in ${currentDir}, searching in parent directory: ${parentDir}`);
-      currentDir = parentDir;
-    }
-  }
+			log.info(
+				`Tasks file not found in ${currentDir}, searching in parent directory: ${parentDir}`
+			);
+			currentDir = parentDir;
+		}
+	}
 
-  // If we've searched all the way to the root and found nothing
-  const error = new Error(`Tasks file not found in ${startDir} or any parent directory.`);
-  error.code = 'TASKS_FILE_NOT_FOUND';
-  throw error;
+	// If we've searched all the way to the root and found nothing
+	const error = new Error(
+		`Tasks file not found in ${startDir} or any parent directory.`
+	);
+	error.code = 'TASKS_FILE_NOT_FOUND';
+	throw error;
 }
 
 // Note: findTasksWithNpmConsideration is not used by findTasksJsonPath and might be legacy or used elsewhere.
 // If confirmed unused, it could potentially be removed in a separate cleanup.
 function findTasksWithNpmConsideration(startDir, log) {
-  // First try our recursive parent search from cwd
-  try {
-    return findTasksJsonWithParentSearch(startDir, null, log);
-  } catch (error) {
-    // If that fails, try looking relative to the executable location
-    const execPath = process.argv[1];
-    const execDir = path.dirname(execPath);
-    log.info(`Looking for tasks file relative to executable at: ${execDir}`);
+	// First try our recursive parent search from cwd
+	try {
+		return findTasksJsonWithParentSearch(startDir, null, log);
+	} catch (error) {
+		// If that fails, try looking relative to the executable location
+		const execPath = process.argv[1];
+		const execDir = path.dirname(execPath);
+		log.info(`Looking for tasks file relative to executable at: ${execDir}`);
 
-    try {
-      return findTasksJsonWithParentSearch(execDir, null, log);
-    } catch (secondError) {
-      // If that also fails, check standard locations in user's home directory
-      const homeDir = os.homedir();
-      log.info(`Looking for tasks file in home directory: ${homeDir}`);
+		try {
+			return findTasksJsonWithParentSearch(execDir, null, log);
+		} catch (secondError) {
+			// If that also fails, check standard locations in user's home directory
+			const homeDir = os.homedir();
+			log.info(`Looking for tasks file in home directory: ${homeDir}`);
 
-      try {
-        // Check standard locations in home dir
-        return findTasksJsonInDirectory(path.join(homeDir, '.task-master'), null, log);
-      } catch (thirdError) {
-        // If all approaches fail, throw the original error
-        throw error;
-      }
-    }
-  }
+			try {
+				// Check standard locations in home dir
+				return findTasksJsonInDirectory(
+					path.join(homeDir, '.task-master'),
+					null,
+					log
+				);
+			} catch (thirdError) {
+				// If all approaches fail, throw the original error
+				throw error;
+			}
+		}
+	}
+}
+
+/**
+ * Finds potential PRD document files based on common naming patterns
+ * @param {string} projectRoot - The project root directory
+ * @param {string|null} explicitPath - Optional explicit path provided by the user
+ * @param {Object} log - Logger object
+ * @returns {string|null} - The path to the first found PRD file, or null if none found
+ */
+export function findPRDDocumentPath(projectRoot, explicitPath, log) {
+	// If explicit path is provided, check if it exists
+	if (explicitPath) {
+		const fullPath = path.isAbsolute(explicitPath)
+			? explicitPath
+			: path.resolve(projectRoot, explicitPath);
+
+		if (fs.existsSync(fullPath)) {
+			log.info(`Using provided PRD document path: ${fullPath}`);
+			return fullPath;
+		} else {
+			log.warn(
+				`Provided PRD document path not found: ${fullPath}, will search for alternatives`
+			);
+		}
+	}
+
+	// Common locations and file patterns for PRD documents
+	const commonLocations = [
+		'', // Project root
+		'scripts/'
+	];
+
+	const commonFileNames = ['PRD.md', 'prd.md', 'PRD.txt', 'prd.txt'];
+
+	// Check all possible combinations
+	for (const location of commonLocations) {
+		for (const fileName of commonFileNames) {
+			const potentialPath = path.join(projectRoot, location, fileName);
+			if (fs.existsSync(potentialPath)) {
+				log.info(`Found PRD document at: ${potentialPath}`);
+				return potentialPath;
+			}
+		}
+	}
+
+	log.warn(`No PRD document found in common locations within ${projectRoot}`);
+	return null;
+}
+
+/**
+ * Resolves the tasks output directory path
+ * @param {string} projectRoot - The project root directory
+ * @param {string|null} explicitPath - Optional explicit output path provided by the user
+ * @param {Object} log - Logger object
+ * @returns {string} - The resolved tasks directory path
+ */
+export function resolveTasksOutputPath(projectRoot, explicitPath, log) {
+	// If explicit path is provided, use it
+	if (explicitPath) {
+		const outputPath = path.isAbsolute(explicitPath)
+			? explicitPath
+			: path.resolve(projectRoot, explicitPath);
+
+		log.info(`Using provided tasks output path: ${outputPath}`);
+		return outputPath;
+	}
+
+	// Default output path: tasks/tasks.json in the project root
+	const defaultPath = path.resolve(projectRoot, 'tasks', 'tasks.json');
+	log.info(`Using default tasks output path: ${defaultPath}`);
+
+	// Ensure the directory exists
+	const outputDir = path.dirname(defaultPath);
+	if (!fs.existsSync(outputDir)) {
+		log.info(`Creating tasks directory: ${outputDir}`);
+		fs.mkdirSync(outputDir, { recursive: true });
+	}
+
+	return defaultPath;
+}
+
+/**
+ * Resolves various file paths needed for MCP operations based on project root
+ * @param {string} projectRoot - The project root directory
+ * @param {Object} args - Command arguments that may contain explicit paths
+ * @param {Object} log - Logger object
+ * @returns {Object} - An object containing resolved paths
+ */
+export function resolveProjectPaths(projectRoot, args, log) {
+	const prdPath = findPRDDocumentPath(projectRoot, args.input, log);
+	const tasksJsonPath = resolveTasksOutputPath(projectRoot, args.output, log);
+
+	// You can add more path resolutions here as needed
+
+	return {
+		projectRoot,
+		prdPath,
+		tasksJsonPath
+		// Add additional path properties as needed
+	};
 }

mcp-server/src/index.js

@@ -1,10 +1,10 @@
-import { FastMCP } from "fastmcp";
-import path from "path";
-import dotenv from "dotenv";
-import { fileURLToPath } from "url";
-import fs from "fs";
-import logger from "./logger.js";
-import { registerTaskMasterTools } from "./tools/index.js";
+import { FastMCP } from 'fastmcp';
+import path from 'path';
+import dotenv from 'dotenv';
+import { fileURLToPath } from 'url';
+import fs from 'fs';
+import logger from './logger.js';
+import { registerTaskMasterTools } from './tools/index.js';
 import { asyncOperationManager } from './core/utils/async-manager.js';
 
 // Load environment variables
@@ -18,74 +18,74 @@ const __dirname = path.dirname(__filename);
  * Main MCP server class that integrates with Task Master
  */
 class TaskMasterMCPServer {
-  constructor() {
-    // Get version from package.json using synchronous fs
-    const packagePath = path.join(__dirname, "../../package.json");
-    const packageJson = JSON.parse(fs.readFileSync(packagePath, "utf8"));
+	constructor() {
+		// Get version from package.json using synchronous fs
+		const packagePath = path.join(__dirname, '../../package.json');
+		const packageJson = JSON.parse(fs.readFileSync(packagePath, 'utf8'));
 
-    this.options = {
-      name: "Task Master MCP Server",
-      version: packageJson.version,
-    };
+		this.options = {
+			name: 'Task Master MCP Server',
+			version: packageJson.version
+		};
 
-    this.server = new FastMCP(this.options);
-    this.initialized = false;
+		this.server = new FastMCP(this.options);
+		this.initialized = false;
 
-    this.server.addResource({});
+		this.server.addResource({});
 
-    this.server.addResourceTemplate({});
+		this.server.addResourceTemplate({});
 
-    // Make the manager accessible (e.g., pass it to tool registration)
-    this.asyncManager = asyncOperationManager;
+		// Make the manager accessible (e.g., pass it to tool registration)
+		this.asyncManager = asyncOperationManager;
 
-    // Bind methods
-    this.init = this.init.bind(this);
-    this.start = this.start.bind(this);
-    this.stop = this.stop.bind(this);
+		// Bind methods
+		this.init = this.init.bind(this);
+		this.start = this.start.bind(this);
+		this.stop = this.stop.bind(this);
 
-    // Setup logging
-    this.logger = logger;
-  }
+		// Setup logging
+		this.logger = logger;
+	}
 
-  /**
-   * Initialize the MCP server with necessary tools and routes
-   */
-  async init() {
-    if (this.initialized) return;
+	/**
+	 * Initialize the MCP server with necessary tools and routes
+	 */
+	async init() {
+		if (this.initialized) return;
 
-    // Pass the manager instance to the tool registration function
-    registerTaskMasterTools(this.server, this.asyncManager);
+		// Pass the manager instance to the tool registration function
+		registerTaskMasterTools(this.server, this.asyncManager);
 
-    this.initialized = true;
+		this.initialized = true;
 
-    return this;
-  }
+		return this;
+	}
 
-  /**
-   * Start the MCP server
-   */
-  async start() {
-    if (!this.initialized) {
-      await this.init();
-    }
+	/**
+	 * Start the MCP server
+	 */
+	async start() {
+		if (!this.initialized) {
+			await this.init();
+		}
 
-    // Start the FastMCP server with increased timeout
-    await this.server.start({
-      transportType: "stdio",
-      timeout: 120000 // 2 minutes timeout (in milliseconds)
-    });
+		// Start the FastMCP server with increased timeout
+		await this.server.start({
+			transportType: 'stdio',
+			timeout: 120000 // 2 minutes timeout (in milliseconds)
+		});
 
-    return this;
-  }
+		return this;
+	}
 
-  /**
-   * Stop the MCP server
-   */
-  async stop() {
-    if (this.server) {
-      await this.server.stop();
-    }
-  }
+	/**
+	 * Stop the MCP server
+	 */
+	async stop() {
+		if (this.server) {
+			await this.server.stop();
+		}
+	}
 }
 
 // Export the manager from here as well, if needed elsewhere

mcp-server/src/logger.js

@@ -1,19 +1,19 @@
-import chalk from "chalk";
-import { isSilentMode } from "../../scripts/modules/utils.js";
+import chalk from 'chalk';
+import { isSilentMode } from '../../scripts/modules/utils.js';
 
 // Define log levels
 const LOG_LEVELS = {
-  debug: 0,
-  info: 1,
-  warn: 2,
-  error: 3,
-  success: 4,
+	debug: 0,
+	info: 1,
+	warn: 2,
+	error: 3,
+	success: 4
 };
 
 // Get log level from environment or default to info
 const LOG_LEVEL = process.env.LOG_LEVEL
-  ? LOG_LEVELS[process.env.LOG_LEVEL.toLowerCase()] ?? LOG_LEVELS.info
-  : LOG_LEVELS.info;
+	? (LOG_LEVELS[process.env.LOG_LEVEL.toLowerCase()] ?? LOG_LEVELS.info)
+	: LOG_LEVELS.info;
 
 /**
  * Logs a message with the specified level
@@ -21,56 +21,66 @@ const LOG_LEVEL = process.env.LOG_LEVEL
  * @param  {...any} args - Arguments to log
  */
 function log(level, ...args) {
-  // Skip logging if silent mode is enabled
-  if (isSilentMode()) {
-    return;
-  }
+	// Skip logging if silent mode is enabled
+	if (isSilentMode()) {
+		return;
+	}
 
-  // Use text prefixes instead of emojis
-  const prefixes = {
-    debug: chalk.gray("[DEBUG]"),
-    info: chalk.blue("[INFO]"),
-    warn: chalk.yellow("[WARN]"),
-    error: chalk.red("[ERROR]"),
-    success: chalk.green("[SUCCESS]"),
-  };
+	// Use text prefixes instead of emojis
+	const prefixes = {
+		debug: chalk.gray('[DEBUG]'),
+		info: chalk.blue('[INFO]'),
+		warn: chalk.yellow('[WARN]'),
+		error: chalk.red('[ERROR]'),
+		success: chalk.green('[SUCCESS]')
+	};
 
-  if (LOG_LEVELS[level] !== undefined && LOG_LEVELS[level] >= LOG_LEVEL) {
-    const prefix = prefixes[level] || "";
-    let coloredArgs = args;
+	if (LOG_LEVELS[level] !== undefined && LOG_LEVELS[level] >= LOG_LEVEL) {
+		const prefix = prefixes[level] || '';
+		let coloredArgs = args;
 
-    try {
-      switch(level) {
-        case "error":
-          coloredArgs = args.map(arg => typeof arg === 'string' ? chalk.red(arg) : arg);
-          break;
-        case "warn":
-          coloredArgs = args.map(arg => typeof arg === 'string' ? chalk.yellow(arg) : arg);
-          break;
-        case "success":
-          coloredArgs = args.map(arg => typeof arg === 'string' ? chalk.green(arg) : arg);
-          break;
-        case "info":
-          coloredArgs = args.map(arg => typeof arg === 'string' ? chalk.blue(arg) : arg);
-          break;
-        case "debug":
-          coloredArgs = args.map(arg => typeof arg === 'string' ? chalk.gray(arg) : arg);
-          break;
-        // default: use original args (no color)
-      }
-    } catch (colorError) {
-      // Fallback if chalk fails on an argument
-      // Use console.error here for internal logger errors, separate from normal logging
-      console.error("Internal Logger Error applying chalk color:", colorError);
-      coloredArgs = args;
-    }
+		try {
+			switch (level) {
+				case 'error':
+					coloredArgs = args.map((arg) =>
+						typeof arg === 'string' ? chalk.red(arg) : arg
+					);
+					break;
+				case 'warn':
+					coloredArgs = args.map((arg) =>
+						typeof arg === 'string' ? chalk.yellow(arg) : arg
+					);
+					break;
+				case 'success':
+					coloredArgs = args.map((arg) =>
+						typeof arg === 'string' ? chalk.green(arg) : arg
+					);
+					break;
+				case 'info':
+					coloredArgs = args.map((arg) =>
+						typeof arg === 'string' ? chalk.blue(arg) : arg
+					);
+					break;
+				case 'debug':
+					coloredArgs = args.map((arg) =>
+						typeof arg === 'string' ? chalk.gray(arg) : arg
+					);
+					break;
+				// default: use original args (no color)
+			}
+		} catch (colorError) {
+			// Fallback if chalk fails on an argument
+			// Use console.error here for internal logger errors, separate from normal logging
+			console.error('Internal Logger Error applying chalk color:', colorError);
+			coloredArgs = args;
+		}
 
-    // Revert to console.log - FastMCP's context logger (context.log)
-    // is responsible for directing logs correctly (e.g., to stderr)
-    // during tool execution without upsetting the client connection.
-    // Logs outside of tool execution (like startup) will go to stdout.
-    console.log(prefix, ...coloredArgs);
-  }
+		// Revert to console.log - FastMCP's context logger (context.log)
+		// is responsible for directing logs correctly (e.g., to stderr)
+		// during tool execution without upsetting the client connection.
+		// Logs outside of tool execution (like startup) will go to stdout.
+		console.log(prefix, ...coloredArgs);
+	}
 }
 
 /**
@@ -78,16 +88,19 @@ function log(level, ...args) {
  * @returns {Object} Logger object with info, error, debug, warn, and success methods
  */
 export function createLogger() {
-  const createLogMethod = (level) => (...args) => log(level, ...args);
+	const createLogMethod =
+		(level) =>
+		(...args) =>
+			log(level, ...args);
 
-  return {
-    debug: createLogMethod("debug"),
-    info: createLogMethod("info"),
-    warn: createLogMethod("warn"),
-    error: createLogMethod("error"),
-    success: createLogMethod("success"),
-    log: log, // Also expose the raw log function
-  };
+	return {
+		debug: createLogMethod('debug'),
+		info: createLogMethod('info'),
+		warn: createLogMethod('warn'),
+		error: createLogMethod('error'),
+		success: createLogMethod('success'),
+		log: log // Also expose the raw log function
+	};
 }
 
 // Export a default logger instance

mcp-server/src/logger.js (lines 31-41)

@@ -1 +0,0 @@
- 

mcp-server/src/tools/add-dependency.js

@@ -3,63 +3,95 @@
  * Tool for adding a dependency to a task
  */
 
-import { z } from "zod";
+import { z } from 'zod';
 import {
-  handleApiResult,
-  createErrorResponse,
-  getProjectRootFromSession
-} from "./utils.js";
-import { addDependencyDirect } from "../core/task-master-core.js";
+	handleApiResult,
+	createErrorResponse,
+	getProjectRootFromSession
+} from './utils.js';
+import { addDependencyDirect } from '../core/task-master-core.js';
+import { findTasksJsonPath } from '../core/utils/path-utils.js';
 
 /**
  * Register the addDependency tool with the MCP server
  * @param {Object} server - FastMCP server instance
  */
 export function registerAddDependencyTool(server) {
-  server.addTool({
-    name: "add_dependency",
-    description: "Add a dependency relationship between two tasks",
-    parameters: z.object({
-      id: z.string().describe("ID of task that will depend on another task"),
-      dependsOn: z.string().describe("ID of task that will become a dependency"),
-      file: z.string().optional().describe("Path to the tasks file (default: tasks/tasks.json)"),
-      projectRoot: z.string().optional().describe("Root directory of the project (default: current working directory)")
-    }),
-    execute: async (args, { log, session, reportProgress }) => {
-      try {
-        log.info(`Adding dependency for task ${args.id} to depend on ${args.dependsOn}`);
-        reportProgress({ progress: 0 });
+	server.addTool({
+		name: 'add_dependency',
+		description: 'Add a dependency relationship between two tasks',
+		parameters: z.object({
+			id: z.string().describe('ID of task that will depend on another task'),
+			dependsOn: z
+				.string()
+				.describe('ID of task that will become a dependency'),
+			file: z
+				.string()
+				.optional()
+				.describe(
+					'Absolute path to the tasks file (default: tasks/tasks.json)'
+				),
+			projectRoot: z
+				.string()
+				.describe('The directory of the project. Must be an absolute path.')
+		}),
+		execute: async (args, { log, session }) => {
+			try {
+				log.info(
+					`Adding dependency for task ${args.id} to depend on ${args.dependsOn}`
+				);
 
-        // Get project root using the utility function
-        let rootFolder = getProjectRootFromSession(session, log);
+				// Get project root from args or session
+				const rootFolder =
+					args.projectRoot || getProjectRootFromSession(session, log);
 
-        // Fallback to args.projectRoot if session didn't provide one
-        if (!rootFolder && args.projectRoot) {
-          rootFolder = args.projectRoot;
-          log.info(`Using project root from args as fallback: ${rootFolder}`);
-        }
+				// Ensure project root was determined
+				if (!rootFolder) {
+					return createErrorResponse(
+						'Could not determine project root. Please provide it explicitly or ensure your session contains valid root information.'
+					);
+				}
 
-        // Call the direct function with the resolved rootFolder
-        const result = await addDependencyDirect({
-          projectRoot: rootFolder,
-          ...args
-        }, log, { reportProgress, mcpLog: log, session});
+				// Resolve the path to tasks.json
+				let tasksJsonPath;
+				try {
+					tasksJsonPath = findTasksJsonPath(
+						{ projectRoot: rootFolder, file: args.file },
+						log
+					);
+				} catch (error) {
+					log.error(`Error finding tasks.json: ${error.message}`);
+					return createErrorResponse(
+						`Failed to find tasks.json: ${error.message}`
+					);
+				}
 
-        reportProgress({ progress: 100 });
+				// Call the direct function with the resolved path
+				const result = await addDependencyDirect(
+					{
+						// Pass the explicitly resolved path
+						tasksJsonPath: tasksJsonPath,
+						// Pass other relevant args
+						id: args.id,
+						dependsOn: args.dependsOn
+					},
+					log
+					// Remove context object
+				);
 
-        // Log result
-        if (result.success) {
-          log.info(`Successfully added dependency: ${result.data.message}`);
-        } else {
-          log.error(`Failed to add dependency: ${result.error.message}`);
-        }
+				// Log result
+				if (result.success) {
+					log.info(`Successfully added dependency: ${result.data.message}`);
+				} else {
+					log.error(`Failed to add dependency: ${result.error.message}`);
+				}
 
-        // Use handleApiResult to format the response
-        return handleApiResult(result, log, 'Error adding dependency');
-      } catch (error) {
-        log.error(`Error in addDependency tool: ${error.message}`);
-        return createErrorResponse(error.message);
-      }
-    },
-  });
+				// Use handleApiResult to format the response
+				return handleApiResult(result, log, 'Error adding dependency');
+			} catch (error) {
+				log.error(`Error in addDependency tool: ${error.message}`);
+				return createErrorResponse(error.message);
+			}
+		}
+	});
 }

mcp-server/src/tools/add-subtask.js

@@ -3,61 +3,116 @@
  * Tool for adding subtasks to existing tasks
  */
 
-import { z } from "zod";
+import { z } from 'zod';
 import {
-  handleApiResult,
-  createErrorResponse,
-  getProjectRootFromSession
-} from "./utils.js";
-import { addSubtaskDirect } from "../core/task-master-core.js";
+	handleApiResult,
+	createErrorResponse,
+	getProjectRootFromSession
+} from './utils.js';
+import { addSubtaskDirect } from '../core/task-master-core.js';
+import { findTasksJsonPath } from '../core/utils/path-utils.js';
 
 /**
  * Register the addSubtask tool with the MCP server
  * @param {Object} server - FastMCP server instance
  */
 export function registerAddSubtaskTool(server) {
-  server.addTool({
-    name: "add_subtask",
-    description: "Add a subtask to an existing task",
-    parameters: z.object({
-      id: z.string().describe("Parent task ID (required)"),
-      taskId: z.string().optional().describe("Existing task ID to convert to subtask"),
-      title: z.string().optional().describe("Title for the new subtask (when creating a new subtask)"),
-      description: z.string().optional().describe("Description for the new subtask"),
-      details: z.string().optional().describe("Implementation details for the new subtask"),
-      status: z.string().optional().describe("Status for the new subtask (default: 'pending')"),
-      dependencies: z.string().optional().describe("Comma-separated list of dependency IDs for the new subtask"),
-      file: z.string().optional().describe("Path to the tasks file (default: tasks/tasks.json)"),
-      skipGenerate: z.boolean().optional().describe("Skip regenerating task files"),
-      projectRoot: z.string().optional().describe("Root directory of the project (default: current working directory)")
-    }),
-    execute: async (args, { log, session, reportProgress }) => {
-      try {
-        log.info(`Adding subtask with args: ${JSON.stringify(args)}`);
+	server.addTool({
+		name: 'add_subtask',
+		description: 'Add a subtask to an existing task',
+		parameters: z.object({
+			id: z.string().describe('Parent task ID (required)'),
+			taskId: z
+				.string()
+				.optional()
+				.describe('Existing task ID to convert to subtask'),
+			title: z
+				.string()
+				.optional()
+				.describe('Title for the new subtask (when creating a new subtask)'),
+			description: z
+				.string()
+				.optional()
+				.describe('Description for the new subtask'),
+			details: z
+				.string()
+				.optional()
+				.describe('Implementation details for the new subtask'),
+			status: z
+				.string()
+				.optional()
+				.describe("Status for the new subtask (default: 'pending')"),
+			dependencies: z
+				.string()
+				.optional()
+				.describe('Comma-separated list of dependency IDs for the new subtask'),
+			file: z
+				.string()
+				.optional()
+				.describe(
+					'Absolute path to the tasks file (default: tasks/tasks.json)'
+				),
+			skipGenerate: z
+				.boolean()
+				.optional()
+				.describe('Skip regenerating task files'),
+			projectRoot: z
+				.string()
+				.describe('The directory of the project. Must be an absolute path.')
+		}),
+		execute: async (args, { log, session }) => {
+			try {
+				log.info(`Adding subtask with args: ${JSON.stringify(args)}`);
 
-        let rootFolder = getProjectRootFromSession(session, log);
+				// Get project root from args or session
+				const rootFolder =
+					args.projectRoot || getProjectRootFromSession(session, log);
 
-        if (!rootFolder && args.projectRoot) {
-          rootFolder = args.projectRoot;
-          log.info(`Using project root from args as fallback: ${rootFolder}`);
-        }
+				if (!rootFolder) {
+					return createErrorResponse(
+						'Could not determine project root. Please provide it explicitly or ensure your session contains valid root information.'
+					);
+				}
 
-        const result = await addSubtaskDirect({
-          projectRoot: rootFolder,
-          ...args
-        }, log, { reportProgress, mcpLog: log, session});
+				let tasksJsonPath;
+				try {
+					tasksJsonPath = findTasksJsonPath(
+						{ projectRoot: rootFolder, file: args.file },
+						log
+					);
+				} catch (error) {
+					log.error(`Error finding tasks.json: ${error.message}`);
+					return createErrorResponse(
+						`Failed to find tasks.json: ${error.message}`
+					);
+				}
 
-        if (result.success) {
-          log.info(`Subtask added successfully: ${result.data.message}`);
-        } else {
-          log.error(`Failed to add subtask: ${result.error.message}`);
-        }
+				const result = await addSubtaskDirect(
+					{
+						tasksJsonPath: tasksJsonPath,
+						id: args.id,
+						taskId: args.taskId,
+						title: args.title,
+						description: args.description,
+						details: args.details,
+						status: args.status,
+						dependencies: args.dependencies,
+						skipGenerate: args.skipGenerate
+					},
+					log
+				);
 
-        return handleApiResult(result, log, 'Error adding subtask');
-      } catch (error) {
-        log.error(`Error in addSubtask tool: ${error.message}`);
-        return createErrorResponse(error.message);
-      }
-    },
-  });
+				if (result.success) {
+					log.info(`Subtask added successfully: ${result.data.message}`);
+				} else {
+					log.error(`Failed to add subtask: ${result.error.message}`);
+				}
+
+				return handleApiResult(result, log, 'Error adding subtask');
+			} catch (error) {
+				log.error(`Error in addSubtask tool: ${error.message}`);
+				return createErrorResponse(error.message);
+			}
+		}
+	});
 }

mcp-server/src/tools/add-task.js

@@ -3,56 +3,118 @@
  * Tool to add a new task using AI
  */
 
-import { z } from "zod";
+import { z } from 'zod';
 import {
-  createErrorResponse,
-  createContentResponse,
-  getProjectRootFromSession,
-  executeTaskMasterCommand,
-  handleApiResult
-} from "./utils.js";
-import { addTaskDirect } from "../core/task-master-core.js";
+	createErrorResponse,
+	createContentResponse,
+	getProjectRootFromSession,
+	executeTaskMasterCommand,
+	handleApiResult
+} from './utils.js';
+import { addTaskDirect } from '../core/task-master-core.js';
+import { findTasksJsonPath } from '../core/utils/path-utils.js';
 
 /**
  * Register the addTask tool with the MCP server
  * @param {Object} server - FastMCP server instance
  */
 export function registerAddTaskTool(server) {
-  server.addTool({
-    name: "add_task",
-    description: "Add a new task using AI",
-    parameters: z.object({
-      prompt: z.string().describe("Description of the task to add"),
-      dependencies: z.string().optional().describe("Comma-separated list of task IDs this task depends on"),
-      priority: z.string().optional().describe("Task priority (high, medium, low)"),
-      file: z.string().optional().describe("Path to the tasks file"),
-      projectRoot: z.string().optional().describe("Root directory of the project"),
-      research: z.boolean().optional().describe("Whether to use research capabilities for task creation")
-    }),
-    execute: async (args, { log, reportProgress, session }) => {
-      try {
-        log.info(`Starting add-task with args: ${JSON.stringify(args)}`);
+	server.addTool({
+		name: 'add_task',
+		description: 'Add a new task using AI',
+		parameters: z.object({
+			prompt: z
+				.string()
+				.optional()
+				.describe(
+					'Description of the task to add (required if not using manual fields)'
+				),
+			title: z
+				.string()
+				.optional()
+				.describe('Task title (for manual task creation)'),
+			description: z
+				.string()
+				.optional()
+				.describe('Task description (for manual task creation)'),
+			details: z
+				.string()
+				.optional()
+				.describe('Implementation details (for manual task creation)'),
+			testStrategy: z
+				.string()
+				.optional()
+				.describe('Test strategy (for manual task creation)'),
+			dependencies: z
+				.string()
+				.optional()
+				.describe('Comma-separated list of task IDs this task depends on'),
+			priority: z
+				.string()
+				.optional()
+				.describe('Task priority (high, medium, low)'),
+			file: z
+				.string()
+				.optional()
+				.describe('Path to the tasks file (default: tasks/tasks.json)'),
+			projectRoot: z
+				.string()
+				.describe('The directory of the project. Must be an absolute path.'),
+			research: z
+				.boolean()
+				.optional()
+				.describe('Whether to use research capabilities for task creation')
+		}),
+		execute: async (args, { log, session }) => {
+			try {
+				log.info(`Starting add-task with args: ${JSON.stringify(args)}`);
 
-        // Get project root from session
-        let rootFolder = getProjectRootFromSession(session, log);
+				// Get project root from args or session
+				const rootFolder =
+					args.projectRoot || getProjectRootFromSession(session, log);
 
-        if (!rootFolder && args.projectRoot) {
-          rootFolder = args.projectRoot;
-          log.info(`Using project root from args as fallback: ${rootFolder}`);
-        }
+				// Ensure project root was determined
+				if (!rootFolder) {
+					return createErrorResponse(
+						'Could not determine project root. Please provide it explicitly or ensure your session contains valid root information.'
+					);
+				}
 
-        // Call the direct function
-        const result = await addTaskDirect({
-          ...args,
-          projectRoot: rootFolder
-        }, log, { reportProgress, session });
+				// Resolve the path to tasks.json
+				let tasksJsonPath;
+				try {
+					tasksJsonPath = findTasksJsonPath(
+						{ projectRoot: rootFolder, file: args.file },
+						log
+					);
+				} catch (error) {
+					log.error(`Error finding tasks.json: ${error.message}`);
+					return createErrorResponse(
+						`Failed to find tasks.json: ${error.message}`
+					);
+				}
 
-        // Return the result
-        return handleApiResult(result, log);
-      } catch (error) {
-        log.error(`Error in add-task tool: ${error.message}`);
-        return createErrorResponse(error.message);
-      }
-    }
-  });
+				// Call the direct function
+				const result = await addTaskDirect(
+					{
+						// Pass the explicitly resolved path
+						tasksJsonPath: tasksJsonPath,
+						// Pass other relevant args
+						prompt: args.prompt,
+						dependencies: args.dependencies,
+						priority: args.priority,
+						research: args.research
+					},
+					log,
+					{ session }
+				);
+
+				// Return the result
+				return handleApiResult(result, log);
+			} catch (error) {
+				log.error(`Error in add-task tool: ${error.message}`);
+				return createErrorResponse(error.message);
+			}
+		}
+	});
 }

mcp-server/src/tools/analyze.js

@@ -3,58 +3,121 @@
  * Tool for analyzing task complexity and generating recommendations
  */
 
-import { z } from "zod";
+import { z } from 'zod';
 import {
-  handleApiResult,
-  createErrorResponse,
-  getProjectRootFromSession
-} from "./utils.js";
-import { analyzeTaskComplexityDirect } from "../core/task-master-core.js";
+	handleApiResult,
+	createErrorResponse,
+	getProjectRootFromSession
+} from './utils.js';
+import { analyzeTaskComplexityDirect } from '../core/task-master-core.js';
+import { findTasksJsonPath } from '../core/utils/path-utils.js';
+import path from 'path';
 
 /**
  * Register the analyze tool with the MCP server
  * @param {Object} server - FastMCP server instance
  */
 export function registerAnalyzeTool(server) {
-  server.addTool({
-    name: "analyze_project_complexity",
-    description: "Analyze task complexity and generate expansion recommendations",
-    parameters: z.object({
-      output: z.string().optional().describe("Output file path for the report (default: scripts/task-complexity-report.json)"),
-      model: z.string().optional().describe("LLM model to use for analysis (defaults to configured model)"),
-      threshold: z.union([z.number(), z.string()]).optional().describe("Minimum complexity score to recommend expansion (1-10) (default: 5)"),
-      file: z.string().optional().describe("Path to the tasks file (default: tasks/tasks.json)"),
-      research: z.boolean().optional().describe("Use Perplexity AI for research-backed complexity analysis"),
-      projectRoot: z.string().optional().describe("Root directory of the project (default: current working directory)")
-    }),
-    execute: async (args, { log, session }) => {
-      try {
-        log.info(`Analyzing task complexity with args: ${JSON.stringify(args)}`);
+	server.addTool({
+		name: 'analyze_project_complexity',
+		description:
+			'Analyze task complexity and generate expansion recommendations',
+		parameters: z.object({
+			output: z
+				.string()
+				.optional()
+				.describe(
+					'Output file path for the report (default: scripts/task-complexity-report.json)'
+				),
+			model: z
+				.string()
+				.optional()
+				.describe(
+					'LLM model to use for analysis (defaults to configured model)'
+				),
+			threshold: z.coerce
+				.number()
+				.min(1)
+				.max(10)
+				.optional()
+				.describe(
+					'Minimum complexity score to recommend expansion (1-10) (default: 5)'
+				),
+			file: z
+				.string()
+				.optional()
+				.describe(
+					'Absolute path to the tasks file (default: tasks/tasks.json)'
+				),
+			research: z
+				.boolean()
+				.optional()
+				.describe('Use Perplexity AI for research-backed complexity analysis'),
+			projectRoot: z
+				.string()
+				.describe('The directory of the project. Must be an absolute path.')
+		}),
+		execute: async (args, { log, session }) => {
+			try {
+				log.info(
+					`Analyzing task complexity with args: ${JSON.stringify(args)}`
+				);
 
-        let rootFolder = getProjectRootFromSession(session, log);
+				// Get project root from args or session
+				const rootFolder =
+					args.projectRoot || getProjectRootFromSession(session, log);
 
-        if (!rootFolder && args.projectRoot) {
-          rootFolder = args.projectRoot;
-          log.info(`Using project root from args as fallback: ${rootFolder}`);
-        }
+				if (!rootFolder) {
+					return createErrorResponse(
+						'Could not determine project root. Please provide it explicitly or ensure your session contains valid root information.'
+					);
+				}
 
-        const result = await analyzeTaskComplexityDirect({
-          projectRoot: rootFolder,
-          ...args
-        }, log, { session });
+				let tasksJsonPath;
+				try {
+					tasksJsonPath = findTasksJsonPath(
+						{ projectRoot: rootFolder, file: args.file },
+						log
+					);
+				} catch (error) {
+					log.error(`Error finding tasks.json: ${error.message}`);
+					return createErrorResponse(
+						`Failed to find tasks.json: ${error.message}`
+					);
+				}
 
-        if (result.success) {
-          log.info(`Task complexity analysis complete: ${result.data.message}`);
-          log.info(`Report summary: ${JSON.stringify(result.data.reportSummary)}`);
-        } else {
-          log.error(`Failed to analyze task complexity: ${result.error.message}`);
-        }
+				const outputPath = args.output
+					? path.resolve(rootFolder, args.output)
+					: path.resolve(rootFolder, 'scripts', 'task-complexity-report.json');
 
-        return handleApiResult(result, log, 'Error analyzing task complexity');
-      } catch (error) {
-        log.error(`Error in analyze tool: ${error.message}`);
-        return createErrorResponse(error.message);
-      }
-    },
-  });
+				const result = await analyzeTaskComplexityDirect(
+					{
+						tasksJsonPath: tasksJsonPath,
+						outputPath: outputPath,
+						model: args.model,
+						threshold: args.threshold,
+						research: args.research
+					},
+					log,
+					{ session }
+				);
+
+				if (result.success) {
+					log.info(`Task complexity analysis complete: ${result.data.message}`);
+					log.info(
+						`Report summary: ${JSON.stringify(result.data.reportSummary)}`
+					);
+				} else {
+					log.error(
+						`Failed to analyze task complexity: ${result.error.message}`
+					);
+				}
+
+				return handleApiResult(result, log, 'Error analyzing task complexity');
+			} catch (error) {
+				log.error(`Error in analyze tool: ${error.message}`);
+				return createErrorResponse(error.message);
+			}
+		}
+	});
 }

mcp-server/src/tools/clear-subtasks.js

@@ -3,61 +3,96 @@
  * Tool for clearing subtasks from parent tasks
  */
 
-import { z } from "zod";
+import { z } from 'zod';
 import {
-  handleApiResult,
-  createErrorResponse,
-  getProjectRootFromSession
-} from "./utils.js";
-import { clearSubtasksDirect } from "../core/task-master-core.js";
+	handleApiResult,
+	createErrorResponse,
+	getProjectRootFromSession
+} from './utils.js';
+import { clearSubtasksDirect } from '../core/task-master-core.js';
+import { findTasksJsonPath } from '../core/utils/path-utils.js';
 
 /**
  * Register the clearSubtasks tool with the MCP server
  * @param {Object} server - FastMCP server instance
  */
 export function registerClearSubtasksTool(server) {
-  server.addTool({
-    name: "clear_subtasks",
-    description: "Clear subtasks from specified tasks",
-    parameters: z.object({
-      id: z.string().optional().describe("Task IDs (comma-separated) to clear subtasks from"),
-      all: z.boolean().optional().describe("Clear subtasks from all tasks"),
-      file: z.string().optional().describe("Path to the tasks file (default: tasks/tasks.json)"),
-      projectRoot: z.string().optional().describe("Root directory of the project (default: current working directory)")
-    }).refine(data => data.id || data.all, {
-      message: "Either 'id' or 'all' parameter must be provided",
-      path: ["id", "all"]
-    }),
-    execute: async (args, { log, session, reportProgress }) => {
-      try {
-        log.info(`Clearing subtasks with args: ${JSON.stringify(args)}`);
-        await reportProgress({ progress: 0 });
+	server.addTool({
+		name: 'clear_subtasks',
+		description: 'Clear subtasks from specified tasks',
+		parameters: z
+			.object({
+				id: z
+					.string()
+					.optional()
+					.describe('Task IDs (comma-separated) to clear subtasks from'),
+				all: z.boolean().optional().describe('Clear subtasks from all tasks'),
+				file: z
+					.string()
+					.optional()
+					.describe(
+						'Absolute path to the tasks file (default: tasks/tasks.json)'
+					),
+				projectRoot: z
+					.string()
+					.describe('The directory of the project. Must be an absolute path.')
+			})
+			.refine((data) => data.id || data.all, {
+				message: "Either 'id' or 'all' parameter must be provided",
+				path: ['id', 'all']
+			}),
+		execute: async (args, { log, session }) => {
+			try {
+				log.info(`Clearing subtasks with args: ${JSON.stringify(args)}`);
 
-        let rootFolder = getProjectRootFromSession(session, log);
+				// Get project root from args or session
+				const rootFolder =
+					args.projectRoot || getProjectRootFromSession(session, log);
 
-        if (!rootFolder && args.projectRoot) {
-          rootFolder = args.projectRoot;
-          log.info(`Using project root from args as fallback: ${rootFolder}`);
-        }
+				// Ensure project root was determined
+				if (!rootFolder) {
+					return createErrorResponse(
+						'Could not determine project root. Please provide it explicitly or ensure your session contains valid root information.'
+					);
+				}
 
-        const result = await clearSubtasksDirect({
-          projectRoot: rootFolder,
-          ...args
-        }, log, { reportProgress, mcpLog: log, session});
+				// Resolve the path to tasks.json
+				let tasksJsonPath;
+				try {
+					tasksJsonPath = findTasksJsonPath(
+						{ projectRoot: rootFolder, file: args.file },
+						log
+					);
+				} catch (error) {
+					log.error(`Error finding tasks.json: ${error.message}`);
+					return createErrorResponse(
+						`Failed to find tasks.json: ${error.message}`
+					);
+				}
 
-        reportProgress({ progress: 100 });
+				const result = await clearSubtasksDirect(
+					{
+						// Pass the explicitly resolved path
+						tasksJsonPath: tasksJsonPath,
+						// Pass other relevant args
+						id: args.id,
+						all: args.all
+					},
+					log
+					// Remove context object as clearSubtasksDirect likely doesn't need session/reportProgress
+				);
 
-        if (result.success) {
-          log.info(`Subtasks cleared successfully: ${result.data.message}`);
-        } else {
-          log.error(`Failed to clear subtasks: ${result.error.message}`);
-        }
+				if (result.success) {
+					log.info(`Subtasks cleared successfully: ${result.data.message}`);
+				} else {
+					log.error(`Failed to clear subtasks: ${result.error.message}`);
+				}
 
-        return handleApiResult(result, log, 'Error clearing subtasks');
-      } catch (error) {
-        log.error(`Error in clearSubtasks tool: ${error.message}`);
-        return createErrorResponse(error.message);
-      }
-    },
-  });
+				return handleApiResult(result, log, 'Error clearing subtasks');
+			} catch (error) {
+				log.error(`Error in clearSubtasks tool: ${error.message}`);
+				return createErrorResponse(error.message);
+			}
+		}
+	});
 }

mcp-server/src/tools/complexity-report.js

@@ -3,56 +3,87 @@
  * Tool for displaying the complexity analysis report
  */
 
-import { z } from "zod";
+import { z } from 'zod';
 import {
-  handleApiResult,
-  createErrorResponse,
-  getProjectRootFromSession
-} from "./utils.js";
-import { complexityReportDirect } from "../core/task-master-core.js";
+	handleApiResult,
+	createErrorResponse,
+	getProjectRootFromSession
+} from './utils.js';
+import { complexityReportDirect } from '../core/task-master-core.js';
+import path from 'path';
 
 /**
  * Register the complexityReport tool with the MCP server
  * @param {Object} server - FastMCP server instance
  */
 export function registerComplexityReportTool(server) {
-  server.addTool({
-    name: "complexity_report",
-    description: "Display the complexity analysis report in a readable format",
-    parameters: z.object({
-      file: z.string().optional().describe("Path to the report file (default: scripts/task-complexity-report.json)"),
-      projectRoot: z.string().optional().describe("Root directory of the project (default: current working directory)")
-    }),
-    execute: async (args, { log, session, reportProgress }) => {
-      try {
-        log.info(`Getting complexity report with args: ${JSON.stringify(args)}`);
-        // await reportProgress({ progress: 0 });
+	server.addTool({
+		name: 'complexity_report',
+		description: 'Display the complexity analysis report in a readable format',
+		parameters: z.object({
+			file: z
+				.string()
+				.optional()
+				.describe(
+					'Path to the report file (default: scripts/task-complexity-report.json)'
+				),
+			projectRoot: z
+				.string()
+				.describe('The directory of the project. Must be an absolute path.')
+		}),
+		execute: async (args, { log, session }) => {
+			try {
+				log.info(
+					`Getting complexity report with args: ${JSON.stringify(args)}`
+				);
 
-        let rootFolder = getProjectRootFromSession(session, log);
+				// Get project root from args or session
+				const rootFolder =
+					args.projectRoot || getProjectRootFromSession(session, log);
 
-        if (!rootFolder && args.projectRoot) {
-          rootFolder = args.projectRoot;
-          log.info(`Using project root from args as fallback: ${rootFolder}`);
-        }
+				// Ensure project root was determined
+				if (!rootFolder) {
+					return createErrorResponse(
+						'Could not determine project root. Please provide it explicitly or ensure your session contains valid root information.'
+					);
+				}
 
-        const result = await complexityReportDirect({
-          projectRoot: rootFolder,
-          ...args
-        }, log/*, { reportProgress, mcpLog: log, session}*/);
+				// Resolve the path to the complexity report file
+				// Default to scripts/task-complexity-report.json relative to root
+				const reportPath = args.file
+					? path.resolve(rootFolder, args.file)
+					: path.resolve(rootFolder, 'scripts', 'task-complexity-report.json');
 
-        // await reportProgress({ progress: 100 });
+				const result = await complexityReportDirect(
+					{
+						// Pass the explicitly resolved path
+						reportPath: reportPath
+						// No other args specific to this tool
+					},
+					log
+				);
 
-        if (result.success) {
-          log.info(`Successfully retrieved complexity report${result.fromCache ? ' (from cache)' : ''}`);
-        } else {
-          log.error(`Failed to retrieve complexity report: ${result.error.message}`);
-        }
+				if (result.success) {
+					log.info(
+						`Successfully retrieved complexity report${result.fromCache ? ' (from cache)' : ''}`
+					);
+				} else {
+					log.error(
+						`Failed to retrieve complexity report: ${result.error.message}`
+					);
+				}
 
-        return handleApiResult(result, log, 'Error retrieving complexity report');
-      } catch (error) {
-        log.error(`Error in complexity-report tool: ${error.message}`);
-        return createErrorResponse(`Failed to retrieve complexity report: ${error.message}`);
-      }
-    },
-  });
+				return handleApiResult(
+					result,
+					log,
+					'Error retrieving complexity report'
+				);
+			} catch (error) {
+				log.error(`Error in complexity-report tool: ${error.message}`);
+				return createErrorResponse(
+					`Failed to retrieve complexity report: ${error.message}`
+				);
+			}
+		}
+	});
 }

mcp-server/src/tools/expand-all.js

@@ -3,57 +3,110 @@
  * Tool for expanding all pending tasks with subtasks
  */
 
-import { z } from "zod";
+import { z } from 'zod';
 import {
-  handleApiResult,
-  createErrorResponse,
-  getProjectRootFromSession
-} from "./utils.js";
-import { expandAllTasksDirect } from "../core/task-master-core.js";
+	handleApiResult,
+	createErrorResponse,
+	getProjectRootFromSession
+} from './utils.js';
+import { expandAllTasksDirect } from '../core/task-master-core.js';
+import { findTasksJsonPath } from '../core/utils/path-utils.js';
 
 /**
  * Register the expandAll tool with the MCP server
  * @param {Object} server - FastMCP server instance
  */
 export function registerExpandAllTool(server) {
-  server.addTool({
-    name: "expand_all",
-    description: "Expand all pending tasks into subtasks",
-    parameters: z.object({
-      num: z.string().optional().describe("Number of subtasks to generate for each task"),
-      research: z.boolean().optional().describe("Enable Perplexity AI for research-backed subtask generation"),
-      prompt: z.string().optional().describe("Additional context to guide subtask generation"),
-      force: z.boolean().optional().describe("Force regeneration of subtasks for tasks that already have them"),
-      file: z.string().optional().describe("Path to the tasks file (default: tasks/tasks.json)"),
-      projectRoot: z.string().optional().describe("Root directory of the project (default: current working directory)")
-    }),
-    execute: async (args, { log, session }) => {
-      try {
-        log.info(`Expanding all tasks with args: ${JSON.stringify(args)}`);
+	server.addTool({
+		name: 'expand_all',
+		description: 'Expand all pending tasks into subtasks',
+		parameters: z.object({
+			num: z
+				.string()
+				.optional()
+				.describe('Number of subtasks to generate for each task'),
+			research: z
+				.boolean()
+				.optional()
+				.describe(
+					'Enable Perplexity AI for research-backed subtask generation'
+				),
+			prompt: z
+				.string()
+				.optional()
+				.describe('Additional context to guide subtask generation'),
+			force: z
+				.boolean()
+				.optional()
+				.describe(
+					'Force regeneration of subtasks for tasks that already have them'
+				),
+			file: z
+				.string()
+				.optional()
+				.describe(
+					'Absolute path to the tasks file (default: tasks/tasks.json)'
+				),
+			projectRoot: z
+				.string()
+				.describe('The directory of the project. Must be an absolute path.')
+		}),
+		execute: async (args, { log, session }) => {
+			try {
+				log.info(`Expanding all tasks with args: ${JSON.stringify(args)}`);
 
-        let rootFolder = getProjectRootFromSession(session, log);
+				// Get project root from args or session
+				const rootFolder =
+					args.projectRoot || getProjectRootFromSession(session, log);
 
-        if (!rootFolder && args.projectRoot) {
-          rootFolder = args.projectRoot;
-          log.info(`Using project root from args as fallback: ${rootFolder}`);
-        }
+				// Ensure project root was determined
+				if (!rootFolder) {
+					return createErrorResponse(
+						'Could not determine project root. Please provide it explicitly or ensure your session contains valid root information.'
+					);
+				}
 
-        const result = await expandAllTasksDirect({
-          projectRoot: rootFolder,
-          ...args
-        }, log, { session });
+				// Resolve the path to tasks.json
+				let tasksJsonPath;
+				try {
+					tasksJsonPath = findTasksJsonPath(
+						{ projectRoot: rootFolder, file: args.file },
+						log
+					);
+				} catch (error) {
+					log.error(`Error finding tasks.json: ${error.message}`);
+					return createErrorResponse(
+						`Failed to find tasks.json: ${error.message}`
+					);
+				}
 
-        if (result.success) {
-          log.info(`Successfully expanded all tasks: ${result.data.message}`);
-        } else {
-          log.error(`Failed to expand all tasks: ${result.error?.message || 'Unknown error'}`);
-        }
+				const result = await expandAllTasksDirect(
+					{
+						// Pass the explicitly resolved path
+						tasksJsonPath: tasksJsonPath,
+						// Pass other relevant args
+						num: args.num,
+						research: args.research,
+						prompt: args.prompt,
+						force: args.force
+					},
+					log,
+					{ session }
+				);
 
-        return handleApiResult(result, log, 'Error expanding all tasks');
-      } catch (error) {
-        log.error(`Error in expand-all tool: ${error.message}`);
-        return createErrorResponse(error.message);
-      }
-    },
-  });
+				if (result.success) {
+					log.info(`Successfully expanded all tasks: ${result.data.message}`);
+				} else {
+					log.error(
+						`Failed to expand all tasks: ${result.error?.message || 'Unknown error'}`
+					);
+				}
+
+				return handleApiResult(result, log, 'Error expanding all tasks');
+			} catch (error) {
+				log.error(`Error in expand-all tool: ${error.message}`);
+				return createErrorResponse(error.message);
+			}
+		}
+	});
 }

mcp-server/src/tools/expand-task.js

@@ -3,75 +3,96 @@
  * Tool to expand a task into subtasks
  */
 
-import { z } from "zod";
+import { z } from 'zod';
 import {
-  handleApiResult,
-  createErrorResponse,
-  getProjectRootFromSession
-} from "./utils.js";
-import { expandTaskDirect } from "../core/task-master-core.js";
-import fs from "fs";
-import path from "path";
+	handleApiResult,
+	createErrorResponse,
+	getProjectRootFromSession
+} from './utils.js';
+import { expandTaskDirect } from '../core/task-master-core.js';
+import { findTasksJsonPath } from '../core/utils/path-utils.js';
+import fs from 'fs';
+import path from 'path';
 
 /**
  * Register the expand-task tool with the MCP server
  * @param {Object} server - FastMCP server instance
  */
 export function registerExpandTaskTool(server) {
-  server.addTool({
-    name: "expand_task",
-    description: "Expand a task into subtasks for detailed implementation",
-    parameters: z.object({
-      id: z.string().describe("ID of task to expand"),
-      num: z.union([z.string(), z.number()]).optional().describe("Number of subtasks to generate"),
-      research: z.boolean().optional().describe("Use Perplexity AI for research-backed generation"),
-      prompt: z.string().optional().describe("Additional context for subtask generation"),
-      file: z.string().optional().describe("Path to the tasks file"),
-      projectRoot: z
-        .string()
-        .optional()
-        .describe(
-          "Root directory of the project (default: current working directory)"
-        ),
-    }),
-    execute: async (args, { log, reportProgress, session }) => {
-      try {
-        log.info(`Starting expand-task with args: ${JSON.stringify(args)}`);
+	server.addTool({
+		name: 'expand_task',
+		description: 'Expand a task into subtasks for detailed implementation',
+		parameters: z.object({
+			id: z.string().describe('ID of task to expand'),
+			num: z.string().optional().describe('Number of subtasks to generate'),
+			research: z
+				.boolean()
+				.optional()
+				.describe('Use Perplexity AI for research-backed generation'),
+			prompt: z
+				.string()
+				.optional()
+				.describe('Additional context for subtask generation'),
+			file: z.string().optional().describe('Absolute path to the tasks file'),
+			projectRoot: z
+				.string()
+				.describe('The directory of the project. Must be an absolute path.'),
+			force: z.boolean().optional().describe('Force the expansion')
+		}),
+		execute: async (args, { log, session }) => {
+			try {
+				log.info(`Starting expand-task with args: ${JSON.stringify(args)}`);
 
-        // Get project root from session
-        let rootFolder = getProjectRootFromSession(session, log);
+				// Get project root from args or session
+				const rootFolder =
+					args.projectRoot || getProjectRootFromSession(session, log);
 
-        if (!rootFolder && args.projectRoot) {
-          rootFolder = args.projectRoot;
-          log.info(`Using project root from args as fallback: ${rootFolder}`);
-        }
+				// Ensure project root was determined
+				if (!rootFolder) {
+					return createErrorResponse(
+						'Could not determine project root. Please provide it explicitly or ensure your session contains valid root information.'
+					);
+				}
 
-        log.info(`Project root resolved to: ${rootFolder}`);
+				log.info(`Project root resolved to: ${rootFolder}`);
 
-        // Check for tasks.json in the standard locations
-        const tasksJsonPath = path.join(rootFolder, 'tasks', 'tasks.json');
+				// Resolve the path to tasks.json using the utility
+				let tasksJsonPath;
+				try {
+					tasksJsonPath = findTasksJsonPath(
+						{ projectRoot: rootFolder, file: args.file },
+						log
+					);
+				} catch (error) {
+					log.error(`Error finding tasks.json: ${error.message}`);
+					return createErrorResponse(
+						`Failed to find tasks.json: ${error.message}`
+					);
+				}
 
-        if (fs.existsSync(tasksJsonPath)) {
-          log.info(`Found tasks.json at ${tasksJsonPath}`);
-          // Add the file parameter directly to args
-          args.file = tasksJsonPath;
-        } else {
-          log.warn(`Could not find tasks.json at ${tasksJsonPath}`);
-        }
+				// Call direct function with only session in the context, not reportProgress
+				// Use the pattern recommended in the MCP guidelines
+				const result = await expandTaskDirect(
+					{
+						// Pass the explicitly resolved path
+						tasksJsonPath: tasksJsonPath,
+						// Pass other relevant args
+						id: args.id,
+						num: args.num,
+						research: args.research,
+						prompt: args.prompt,
+						force: args.force // Need to add force to parameters
+					},
+					log,
+					{ session }
+				); // Only pass session, NOT reportProgress
 
-        // Call direct function with only session in the context, not reportProgress
-        // Use the pattern recommended in the MCP guidelines
-        const result = await expandTaskDirect({
-          ...args,
-          projectRoot: rootFolder
-        }, log, { session }); // Only pass session, NOT reportProgress
-        
-        // Return the result
-        return handleApiResult(result, log, 'Error expanding task');
-      } catch (error) {
-        log.error(`Error in expand task tool: ${error.message}`);
-        return createErrorResponse(error.message);
-      }
-    },
-  });
+				// Return the result
+				return handleApiResult(result, log, 'Error expanding task');
+			} catch (error) {
+				log.error(`Error in expand task tool: ${error.message}`);
+				return createErrorResponse(error.message);
+			}
+		}
+	});
 }

mcp-server/src/tools/fix-dependencies.js

@@ -3,56 +3,74 @@
  * Tool for automatically fixing invalid task dependencies
  */
 
-import { z } from "zod";
+import { z } from 'zod';
 import {
-  handleApiResult,
-  createErrorResponse,
-  getProjectRootFromSession
-} from "./utils.js";
-import { fixDependenciesDirect } from "../core/task-master-core.js";
+	handleApiResult,
+	createErrorResponse,
+	getProjectRootFromSession
+} from './utils.js';
+import { fixDependenciesDirect } from '../core/task-master-core.js';
+import { findTasksJsonPath } from '../core/utils/path-utils.js';
 
 /**
  * Register the fixDependencies tool with the MCP server
  * @param {Object} server - FastMCP server instance
  */
 export function registerFixDependenciesTool(server) {
-  server.addTool({
-    name: "fix_dependencies",
-    description: "Fix invalid dependencies in tasks automatically",
-    parameters: z.object({
-      file: z.string().optional().describe("Path to the tasks file"),
-      projectRoot: z.string().optional().describe("Root directory of the project (default: current working directory)")
-    }),
-    execute: async (args, { log, session, reportProgress }) => {
-      try {
-        log.info(`Fixing dependencies with args: ${JSON.stringify(args)}`);
-        await reportProgress({ progress: 0 });
+	server.addTool({
+		name: 'fix_dependencies',
+		description: 'Fix invalid dependencies in tasks automatically',
+		parameters: z.object({
+			file: z.string().optional().describe('Absolute path to the tasks file'),
+			projectRoot: z
+				.string()
+				.describe('The directory of the project. Must be an absolute path.')
+		}),
+		execute: async (args, { log, session }) => {
+			try {
+				log.info(`Fixing dependencies with args: ${JSON.stringify(args)}`);
 
-        let rootFolder = getProjectRootFromSession(session, log);
+				// Get project root from args or session
+				const rootFolder =
+					args.projectRoot || getProjectRootFromSession(session, log);
 
-        if (!rootFolder && args.projectRoot) {
-          rootFolder = args.projectRoot;
-          log.info(`Using project root from args as fallback: ${rootFolder}`);
-        }
+				if (!rootFolder) {
+					return createErrorResponse(
+						'Could not determine project root. Please provide it explicitly or ensure your session contains valid root information.'
+					);
+				}
 
-        const result = await fixDependenciesDirect({
-          projectRoot: rootFolder,
-          ...args
-        }, log, { reportProgress, mcpLog: log, session});
+				let tasksJsonPath;
+				try {
+					tasksJsonPath = findTasksJsonPath(
+						{ projectRoot: rootFolder, file: args.file },
+						log
+					);
+				} catch (error) {
+					log.error(`Error finding tasks.json: ${error.message}`);
+					return createErrorResponse(
+						`Failed to find tasks.json: ${error.message}`
+					);
+				}
 
-        await reportProgress({ progress: 100 });
+				const result = await fixDependenciesDirect(
+					{
+						tasksJsonPath: tasksJsonPath
+					},
+					log
+				);
 
-        if (result.success) {
-          log.info(`Successfully fixed dependencies: ${result.data.message}`);
-        } else {
-          log.error(`Failed to fix dependencies: ${result.error.message}`);
-        }
+				if (result.success) {
+					log.info(`Successfully fixed dependencies: ${result.data.message}`);
+				} else {
+					log.error(`Failed to fix dependencies: ${result.error.message}`);
+				}
 
-        return handleApiResult(result, log, 'Error fixing dependencies');
-      } catch (error) {
-        log.error(`Error in fixDependencies tool: ${error.message}`);
-        return createErrorResponse(error.message);
-      }
-    }
-  });
+				return handleApiResult(result, log, 'Error fixing dependencies');
+			} catch (error) {
+				log.error(`Error in fixDependencies tool: ${error.message}`);
+				return createErrorResponse(error.message);
+			}
+		}
+	});
 }

mcp-server/src/tools/generate.js

@@ -3,62 +3,92 @@
  * Tool to generate individual task files from tasks.json
  */
 
-import { z } from "zod";
+import { z } from 'zod';
 import {
-  handleApiResult,
-  createErrorResponse,
-  getProjectRootFromSession
-} from "./utils.js";
-import { generateTaskFilesDirect } from "../core/task-master-core.js";
+	handleApiResult,
+	createErrorResponse,
+	getProjectRootFromSession
+} from './utils.js';
+import { generateTaskFilesDirect } from '../core/task-master-core.js';
+import { findTasksJsonPath } from '../core/utils/path-utils.js';
+import path from 'path';
 
 /**
  * Register the generate tool with the MCP server
  * @param {Object} server - FastMCP server instance
  */
 export function registerGenerateTool(server) {
-  server.addTool({
-    name: "generate",
-    description: "Generates individual task files in tasks/ directory based on tasks.json",
-    parameters: z.object({
-      file: z.string().optional().describe("Path to the tasks file"),
-      output: z.string().optional().describe("Output directory (default: same directory as tasks file)"),
-      projectRoot: z
-        .string()
-        .optional()
-        .describe(
-          "Root directory of the project (default: current working directory)"
-        ),
-    }),
-    execute: async (args, { log, session, reportProgress }) => {
-      try {
-        log.info(`Generating task files with args: ${JSON.stringify(args)}`);
-        // await reportProgress({ progress: 0 });
+	server.addTool({
+		name: 'generate',
+		description:
+			'Generates individual task files in tasks/ directory based on tasks.json',
+		parameters: z.object({
+			file: z.string().optional().describe('Absolute path to the tasks file'),
+			output: z
+				.string()
+				.optional()
+				.describe('Output directory (default: same directory as tasks file)'),
+			projectRoot: z
+				.string()
+				.describe('The directory of the project. Must be an absolute path.')
+		}),
+		execute: async (args, { log, session }) => {
+			try {
+				log.info(`Generating task files with args: ${JSON.stringify(args)}`);
 
-        let rootFolder = getProjectRootFromSession(session, log);
+				// Get project root from args or session
+				const rootFolder =
+					args.projectRoot || getProjectRootFromSession(session, log);
 
-        if (!rootFolder && args.projectRoot) {
-          rootFolder = args.projectRoot;
-          log.info(`Using project root from args as fallback: ${rootFolder}`);
-        }
+				// Ensure project root was determined
+				if (!rootFolder) {
+					return createErrorResponse(
+						'Could not determine project root. Please provide it explicitly or ensure your session contains valid root information.'
+					);
+				}
 
-        const result = await generateTaskFilesDirect({
-          projectRoot: rootFolder,
-          ...args
-        }, log/*, { reportProgress, mcpLog: log, session}*/);
+				// Resolve the path to tasks.json
+				let tasksJsonPath;
+				try {
+					tasksJsonPath = findTasksJsonPath(
+						{ projectRoot: rootFolder, file: args.file },
+						log
+					);
+				} catch (error) {
+					log.error(`Error finding tasks.json: ${error.message}`);
+					return createErrorResponse(
+						`Failed to find tasks.json: ${error.message}`
+					);
+				}
 
-        // await reportProgress({ progress: 100 });
+				// Determine output directory: use explicit arg or default to tasks.json directory
+				const outputDir = args.output
+					? path.resolve(rootFolder, args.output) // Resolve relative to root if needed
+					: path.dirname(tasksJsonPath);
 
-        if (result.success) {
-          log.info(`Successfully generated task files: ${result.data.message}`);
-        } else {
-          log.error(`Failed to generate task files: ${result.error?.message || 'Unknown error'}`);
-        }
+				const result = await generateTaskFilesDirect(
+					{
+						// Pass the explicitly resolved paths
+						tasksJsonPath: tasksJsonPath,
+						outputDir: outputDir
+						// No other args specific to this tool
+					},
+					log
+				);
 
-        return handleApiResult(result, log, 'Error generating task files');
-      } catch (error) {
-        log.error(`Error in generate tool: ${error.message}`);
-        return createErrorResponse(error.message);
-      }
-    },
-  });
+				if (result.success) {
+					log.info(`Successfully generated task files: ${result.data.message}`);
+				} else {
+					log.error(
+						`Failed to generate task files: ${result.error?.message || 'Unknown error'}`
+					);
+				}
+
+				return handleApiResult(result, log, 'Error generating task files');
+			} catch (error) {
+				log.error(`Error in generate tool: ${error.message}`);
+				return createErrorResponse(error.message);
+			}
+		}
+	});
 }

mcp-server/src/tools/get-operation-status.js

@@ -8,35 +8,40 @@ import { createErrorResponse, createContentResponse } from './utils.js'; // Assu
  * @param {AsyncOperationManager} asyncManager - The async operation manager.
  */
 export function registerGetOperationStatusTool(server, asyncManager) {
-    server.addTool({
-        name: 'get_operation_status',
-        description: 'Retrieves the status and result/error of a background operation.',
-        parameters: z.object({
-            operationId: z.string().describe('The ID of the operation to check.'),
-        }),
-        execute: async (args, { log }) => {
-            try {
-                const { operationId } = args;
-                log.info(`Checking status for operation ID: ${operationId}`);
+	server.addTool({
+		name: 'get_operation_status',
+		description:
+			'Retrieves the status and result/error of a background operation.',
+		parameters: z.object({
+			operationId: z.string().describe('The ID of the operation to check.')
+		}),
+		execute: async (args, { log }) => {
+			try {
+				const { operationId } = args;
+				log.info(`Checking status for operation ID: ${operationId}`);
 
-                const status = asyncManager.getStatus(operationId);
+				const status = asyncManager.getStatus(operationId);
 
-                // Status will now always return an object, but it might have status='not_found'
-                if (status.status === 'not_found') {
-                    log.warn(`Operation ID not found: ${operationId}`);
-                    return createErrorResponse(
-                        status.error?.message || `Operation ID not found: ${operationId}`, 
-                        status.error?.code || 'OPERATION_NOT_FOUND'
-                    );
-                }
+				// Status will now always return an object, but it might have status='not_found'
+				if (status.status === 'not_found') {
+					log.warn(`Operation ID not found: ${operationId}`);
+					return createErrorResponse(
+						status.error?.message || `Operation ID not found: ${operationId}`,
+						status.error?.code || 'OPERATION_NOT_FOUND'
+					);
+				}
 
-                log.info(`Status for ${operationId}: ${status.status}`);
-                return createContentResponse(status);
-
-            } catch (error) {
-                log.error(`Error in get_operation_status tool: ${error.message}`, { stack: error.stack });
-                return createErrorResponse(`Failed to get operation status: ${error.message}`, 'GET_STATUS_ERROR');
-            }
-        },
-    });
+				log.info(`Status for ${operationId}: ${status.status}`);
+				return createContentResponse(status);
+			} catch (error) {
+				log.error(`Error in get_operation_status tool: ${error.message}`, {
+					stack: error.stack
+				});
+				return createErrorResponse(
+					`Failed to get operation status: ${error.message}`,
+					'GET_STATUS_ERROR'
+				);
+			}
+		}
+	});
 }

mcp-server/src/tools/get-task.js

@@ -3,13 +3,14 @@
  * Tool to get task details by ID
  */
 
-import { z } from "zod";
+import { z } from 'zod';
 import {
-  handleApiResult,
-  createErrorResponse,
-  getProjectRootFromSession
-} from "./utils.js";
-import { showTaskDirect } from "../core/task-master-core.js";
+	handleApiResult,
+	createErrorResponse,
+	getProjectRootFromSession
+} from './utils.js';
+import { showTaskDirect } from '../core/task-master-core.js';
+import { findTasksJsonPath } from '../core/utils/path-utils.js';
 
 /**
  * Custom processor function that removes allTasks from the response
@@ -17,16 +18,16 @@ import { showTaskDirect } from "../core/task-master-core.js";
  * @returns {Object} - The processed data with allTasks removed
  */
 function processTaskResponse(data) {
-  if (!data) return data;
+	if (!data) return data;
 
-  // If we have the expected structure with task and allTasks
-  if (data.task) {
-    // Return only the task object, removing the allTasks array
-    return data.task;
-  }
+	// If we have the expected structure with task and allTasks
+	if (data.task) {
+		// Return only the task object, removing the allTasks array
+		return data.task;
+	}
 
-  // If structure is unexpected, return as is
-  return data;
+	// If structure is unexpected, return as is
+	return data;
 }
 
 /**
@@ -34,59 +35,89 @@ function processTaskResponse(data) {
  * @param {Object} server - FastMCP server instance
  */
 export function registerShowTaskTool(server) {
-  server.addTool({
-    name: "get_task",
-    description: "Get detailed information about a specific task",
-    parameters: z.object({
-      id: z.string().describe("Task ID to get"),
-      file: z.string().optional().describe("Path to the tasks file"),
-      projectRoot: z
-        .string()
-        .optional()
-        .describe(
-          "Root directory of the project (default: current working directory)"
-        ),
-    }),
-    execute: async (args, { log, session, reportProgress }) => {
-      // Log the session right at the start of execute
-      log.info(`Session object received in execute: ${JSON.stringify(session)}`); // Use JSON.stringify for better visibility
+	server.addTool({
+		name: 'get_task',
+		description: 'Get detailed information about a specific task',
+		parameters: z.object({
+			id: z.string().describe('Task ID to get'),
+			file: z.string().optional().describe('Absolute path to the tasks file'),
+			projectRoot: z
+				.string()
+				.describe('The directory of the project. Must be an absolute path.')
+		}),
+		execute: async (args, { log, session }) => {
+			// Log the session right at the start of execute
+			log.info(
+				`Session object received in execute: ${JSON.stringify(session)}`
+			); // Use JSON.stringify for better visibility
 
-      try {
-        log.info(`Getting task details for ID: ${args.id}`);
+			try {
+				log.info(`Getting task details for ID: ${args.id}`);
 
-        log.info(`Session object received in execute: ${JSON.stringify(session)}`); // Use JSON.stringify for better visibility
+				log.info(
+					`Session object received in execute: ${JSON.stringify(session)}`
+				); // Use JSON.stringify for better visibility
 
-        let rootFolder = getProjectRootFromSession(session, log);
+				// Get project root from args or session
+				const rootFolder =
+					args.projectRoot || getProjectRootFromSession(session, log);
 
-        if (!rootFolder && args.projectRoot) {
-          rootFolder = args.projectRoot;
-          log.info(`Using project root from args as fallback: ${rootFolder}`);
-        } else if (!rootFolder) {
-          // Ensure we always have *some* root, even if session failed and args didn't provide one
-          rootFolder = process.cwd();
-          log.warn(`Session and args failed to provide root, using CWD: ${rootFolder}`);
-        }
+				// Ensure project root was determined
+				if (!rootFolder) {
+					return createErrorResponse(
+						'Could not determine project root. Please provide it explicitly or ensure your session contains valid root information.'
+					);
+				}
 
-        log.info(`Attempting to use project root: ${rootFolder}`); // Log the final resolved root
+				log.info(`Attempting to use project root: ${rootFolder}`); // Log the final resolved root
 
-        log.info(`Root folder: ${rootFolder}`); // Log the final resolved root
-        const result = await showTaskDirect({
-          projectRoot: rootFolder,
-          ...args
-        }, log);
+				log.info(`Root folder: ${rootFolder}`); // Log the final resolved root
 
-        if (result.success) {
-          log.info(`Successfully retrieved task details for ID: ${args.id}${result.fromCache ? ' (from cache)' : ''}`);
-        } else {
-          log.error(`Failed to get task: ${result.error.message}`);
-        }
+				// Resolve the path to tasks.json
+				let tasksJsonPath;
+				try {
+					tasksJsonPath = findTasksJsonPath(
+						{ projectRoot: rootFolder, file: args.file },
+						log
+					);
+				} catch (error) {
+					log.error(`Error finding tasks.json: ${error.message}`);
+					return createErrorResponse(
+						`Failed to find tasks.json: ${error.message}`
+					);
+				}
 
-        // Use our custom processor function to remove allTasks from the response
-        return handleApiResult(result, log, 'Error retrieving task details', processTaskResponse);
-      } catch (error) {
-        log.error(`Error in get-task tool: ${error.message}\n${error.stack}`); // Add stack trace
-        return createErrorResponse(`Failed to get task: ${error.message}`);
-      }
-    },
-  });
+				log.info(`Attempting to use tasks file path: ${tasksJsonPath}`);
+
+				const result = await showTaskDirect(
+					{
+						// Pass the explicitly resolved path
+						tasksJsonPath: tasksJsonPath,
+						// Pass other relevant args
+						id: args.id
+					},
+					log
+				);
+
+				if (result.success) {
+					log.info(
+						`Successfully retrieved task details for ID: ${args.id}${result.fromCache ? ' (from cache)' : ''}`
+					);
+				} else {
+					log.error(`Failed to get task: ${result.error.message}`);
+				}
+
+				// Use our custom processor function to remove allTasks from the response
+				return handleApiResult(
+					result,
+					log,
+					'Error retrieving task details',
+					processTaskResponse
+				);
+			} catch (error) {
+				log.error(`Error in get-task tool: ${error.message}\n${error.stack}`); // Add stack trace
+				return createErrorResponse(`Failed to get task: ${error.message}`);
+			}
+		}
+	});
 }

mcp-server/src/tools/get-tasks.js

@@ -3,63 +3,94 @@
  * Tool to get all tasks from Task Master
  */
 
-import { z } from "zod";
+import { z } from 'zod';
 import {
-  createErrorResponse,
-  handleApiResult,
-  getProjectRootFromSession
-} from "./utils.js";
-import { listTasksDirect } from "../core/task-master-core.js";
+	createErrorResponse,
+	handleApiResult,
+	getProjectRootFromSession
+} from './utils.js';
+import { listTasksDirect } from '../core/task-master-core.js';
+import { findTasksJsonPath } from '../core/utils/path-utils.js';
 
 /**
  * Register the getTasks tool with the MCP server
  * @param {Object} server - FastMCP server instance
  */
 export function registerListTasksTool(server) {
-  server.addTool({
-    name: "get_tasks",
-    description: "Get all tasks from Task Master, optionally filtering by status and including subtasks.",
-    parameters: z.object({
-      status: z.string().optional().describe("Filter tasks by status (e.g., 'pending', 'done')"),
-      withSubtasks: z
-        .boolean()
-        .optional()
-        .describe("Include subtasks nested within their parent tasks in the response"),
-      file: z.string().optional().describe("Path to the tasks file (relative to project root or absolute)"),
-      projectRoot: z
-        .string()
-        .optional()
-        .describe(
-          "Root directory of the project (default: automatically detected from session or CWD)"
-        ),
-    }),
-    execute: async (args, { log, session, reportProgress }) => {
-      try {
-        log.info(`Getting tasks with filters: ${JSON.stringify(args)}`);
-        // await reportProgress({ progress: 0 });
+	server.addTool({
+		name: 'get_tasks',
+		description:
+			'Get all tasks from Task Master, optionally filtering by status and including subtasks.',
+		parameters: z.object({
+			status: z
+				.string()
+				.optional()
+				.describe("Filter tasks by status (e.g., 'pending', 'done')"),
+			withSubtasks: z
+				.boolean()
+				.optional()
+				.describe(
+					'Include subtasks nested within their parent tasks in the response'
+				),
+			file: z
+				.string()
+				.optional()
+				.describe(
+					'Path to the tasks file (relative to project root or absolute)'
+				),
+			projectRoot: z
+				.string()
+				.describe('The directory of the project. Must be an absolute path.')
+		}),
+		execute: async (args, { log, session }) => {
+			try {
+				log.info(`Getting tasks with filters: ${JSON.stringify(args)}`);
 
-        let rootFolder = getProjectRootFromSession(session, log);
+				// Get project root from args or session
+				const rootFolder =
+					args.projectRoot || getProjectRootFromSession(session, log);
 
-        if (!rootFolder && args.projectRoot) {
-          rootFolder = args.projectRoot;
-          log.info(`Using project root from args as fallback: ${rootFolder}`);
-        }
+				// Ensure project root was determined
+				if (!rootFolder) {
+					return createErrorResponse(
+						'Could not determine project root. Please provide it explicitly or ensure your session contains valid root information.'
+					);
+				}
 
-        const result = await listTasksDirect({
-          projectRoot: rootFolder,
-          ...args
-        }, log/*, { reportProgress, mcpLog: log, session}*/);
+				// Resolve the path to tasks.json
+				let tasksJsonPath;
+				try {
+					tasksJsonPath = findTasksJsonPath(
+						{ projectRoot: rootFolder, file: args.file },
+						log
+					);
+				} catch (error) {
+					log.error(`Error finding tasks.json: ${error.message}`);
+					// Use the error message from findTasksJsonPath for better context
+					return createErrorResponse(
+						`Failed to find tasks.json: ${error.message}`
+					);
+				}
 
-        // await reportProgress({ progress: 100 });
+				const result = await listTasksDirect(
+					{
+						tasksJsonPath: tasksJsonPath,
+						status: args.status,
+						withSubtasks: args.withSubtasks
+					},
+					log
+				);
 
-        log.info(`Retrieved ${result.success ? (result.data?.tasks?.length || 0) : 0} tasks${result.fromCache ? ' (from cache)' : ''}`);
-        return handleApiResult(result, log, 'Error getting tasks');
-      } catch (error) {
-        log.error(`Error getting tasks: ${error.message}`);
-        return createErrorResponse(error.message);
-      }
-    },
-  });
+				log.info(
+					`Retrieved ${result.success ? result.data?.tasks?.length || 0 : 0} tasks${result.fromCache ? ' (from cache)' : ''}`
+				);
+				return handleApiResult(result, log, 'Error getting tasks');
+			} catch (error) {
+				log.error(`Error getting tasks: ${error.message}`);
+				return createErrorResponse(error.message);
+			}
+		}
+	});
 }
 
 // We no longer need the formatTasksResponse function as we're returning raw JSON data

mcp-server/src/tools/index.js

@@ -3,28 +3,28 @@
  * Export all Task Master CLI tools for MCP server
  */
 
-import { registerListTasksTool } from "./get-tasks.js";
-import logger from "../logger.js";
-import { registerSetTaskStatusTool } from "./set-task-status.js";
-import { registerParsePRDTool } from "./parse-prd.js";
-import { registerUpdateTool } from "./update.js";
-import { registerUpdateTaskTool } from "./update-task.js";
-import { registerUpdateSubtaskTool } from "./update-subtask.js";
-import { registerGenerateTool } from "./generate.js";
-import { registerShowTaskTool } from "./get-task.js";
-import { registerNextTaskTool } from "./next-task.js";
-import { registerExpandTaskTool } from "./expand-task.js";
-import { registerAddTaskTool } from "./add-task.js";
-import { registerAddSubtaskTool } from "./add-subtask.js";
-import { registerRemoveSubtaskTool } from "./remove-subtask.js";
-import { registerAnalyzeTool } from "./analyze.js";
-import { registerClearSubtasksTool } from "./clear-subtasks.js";
-import { registerExpandAllTool } from "./expand-all.js";
-import { registerRemoveDependencyTool } from "./remove-dependency.js";
-import { registerValidateDependenciesTool } from "./validate-dependencies.js";
-import { registerFixDependenciesTool } from "./fix-dependencies.js";
-import { registerComplexityReportTool } from "./complexity-report.js";
-import { registerAddDependencyTool } from "./add-dependency.js";
+import { registerListTasksTool } from './get-tasks.js';
+import logger from '../logger.js';
+import { registerSetTaskStatusTool } from './set-task-status.js';
+import { registerParsePRDTool } from './parse-prd.js';
+import { registerUpdateTool } from './update.js';
+import { registerUpdateTaskTool } from './update-task.js';
+import { registerUpdateSubtaskTool } from './update-subtask.js';
+import { registerGenerateTool } from './generate.js';
+import { registerShowTaskTool } from './get-task.js';
+import { registerNextTaskTool } from './next-task.js';
+import { registerExpandTaskTool } from './expand-task.js';
+import { registerAddTaskTool } from './add-task.js';
+import { registerAddSubtaskTool } from './add-subtask.js';
+import { registerRemoveSubtaskTool } from './remove-subtask.js';
+import { registerAnalyzeTool } from './analyze.js';
+import { registerClearSubtasksTool } from './clear-subtasks.js';
+import { registerExpandAllTool } from './expand-all.js';
+import { registerRemoveDependencyTool } from './remove-dependency.js';
+import { registerValidateDependenciesTool } from './validate-dependencies.js';
+import { registerFixDependenciesTool } from './fix-dependencies.js';
+import { registerComplexityReportTool } from './complexity-report.js';
+import { registerAddDependencyTool } from './add-dependency.js';
 import { registerRemoveTaskTool } from './remove-task.js';
 import { registerInitializeProjectTool } from './initialize-project.js';
 import { asyncOperationManager } from '../core/utils/async-manager.js';
@@ -35,39 +35,37 @@ import { asyncOperationManager } from '../core/utils/async-manager.js';
  * @param {asyncOperationManager} asyncManager - The async operation manager instance
  */
 export function registerTaskMasterTools(server, asyncManager) {
-  try {
-    // Register each tool
-    registerListTasksTool(server);
-    registerSetTaskStatusTool(server);
-    registerParsePRDTool(server);
-    registerUpdateTool(server);
-    registerUpdateTaskTool(server);
-    registerUpdateSubtaskTool(server);
-    registerGenerateTool(server);
-    registerShowTaskTool(server);
-    registerNextTaskTool(server);
-    registerExpandTaskTool(server);
-    registerAddTaskTool(server, asyncManager);
-    registerAddSubtaskTool(server);
-    registerRemoveSubtaskTool(server);
-    registerAnalyzeTool(server);
-    registerClearSubtasksTool(server);
-    registerExpandAllTool(server);
-    registerRemoveDependencyTool(server);
-    registerValidateDependenciesTool(server);
-    registerFixDependenciesTool(server);
-    registerComplexityReportTool(server);
-    registerAddDependencyTool(server);
-    registerRemoveTaskTool(server);
-    registerInitializeProjectTool(server);
-  } catch (error) {
-    logger.error(`Error registering Task Master tools: ${error.message}`);
-    throw error;
-  }
-
-  logger.info('Registered Task Master MCP tools');
+	try {
+		// Register each tool
+		registerListTasksTool(server);
+		registerSetTaskStatusTool(server);
+		registerParsePRDTool(server);
+		registerUpdateTool(server);
+		registerUpdateTaskTool(server);
+		registerUpdateSubtaskTool(server);
+		registerGenerateTool(server);
+		registerShowTaskTool(server);
+		registerNextTaskTool(server);
+		registerExpandTaskTool(server);
+		registerAddTaskTool(server, asyncManager);
+		registerAddSubtaskTool(server);
+		registerRemoveSubtaskTool(server);
+		registerAnalyzeTool(server);
+		registerClearSubtasksTool(server);
+		registerExpandAllTool(server);
+		registerRemoveDependencyTool(server);
+		registerValidateDependenciesTool(server);
+		registerFixDependenciesTool(server);
+		registerComplexityReportTool(server);
+		registerAddDependencyTool(server);
+		registerRemoveTaskTool(server);
+		registerInitializeProjectTool(server);
+	} catch (error) {
+		logger.error(`Error registering Task Master tools: ${error.message}`);
+		throw error;
+	}
 }
 
 export default {
-  registerTaskMasterTools,
+	registerTaskMasterTools
 };

mcp-server/src/tools/initialize-project.js

@@ -1,62 +1,94 @@
-import { z } from "zod";
-import { execSync } from 'child_process';
-import { createContentResponse, createErrorResponse } from "./utils.js"; // Only need response creators
+import { z } from 'zod';
+import {
+	createContentResponse,
+	createErrorResponse,
+	handleApiResult
+} from './utils.js';
+import { initializeProjectDirect } from '../core/task-master-core.js';
 
 export function registerInitializeProjectTool(server) {
-  server.addTool({
-    name: "initialize_project", // snake_case for tool name
-    description: "Initializes a new Task Master project structure in the current working directory by running 'task-master init'.",
-    parameters: z.object({
-      projectName: z.string().optional().describe("The name for the new project."),
-      projectDescription: z.string().optional().describe("A brief description for the project."),
-      projectVersion: z.string().optional().describe("The initial version for the project (e.g., '0.1.0')."),
-      authorName: z.string().optional().describe("The author's name."),
-      skipInstall: z.boolean().optional().default(false).describe("Skip installing dependencies automatically."),
-      addAliases: z.boolean().optional().default(false).describe("Add shell aliases (tm, taskmaster) to shell config file."),
-      yes: z.boolean().optional().default(false).describe("Skip prompts and use default values or provided arguments."),
-      // projectRoot is not needed here as 'init' works on the current directory
-    }),
-    execute: async (args, { log }) => { // Destructure context to get log
-      try {
-        log.info(`Executing initialize_project with args: ${JSON.stringify(args)}`);
+	server.addTool({
+		name: 'initialize_project',
+		description:
+			"Initializes a new Task Master project structure by calling the core initialization logic. Derives target directory from client session. If project details (name, description, author) are not provided, prompts the user or skips if 'yes' flag is true. DO NOT run without parameters.",
+		parameters: z.object({
+			projectName: z
+				.string()
+				.optional()
+				.describe(
+					'The name for the new project. If not provided, prompt the user for it.'
+				),
+			projectDescription: z
+				.string()
+				.optional()
+				.describe(
+					'A brief description for the project. If not provided, prompt the user for it.'
+				),
+			projectVersion: z
+				.string()
+				.optional()
+				.describe(
+					"The initial version for the project (e.g., '0.1.0'). User input not needed unless user requests to override."
+				),
+			authorName: z
+				.string()
+				.optional()
+				.describe(
+					"The author's name. User input not needed unless user requests to override."
+				),
+			skipInstall: z
+				.boolean()
+				.optional()
+				.default(false)
+				.describe(
+					'Skip installing dependencies automatically. Never do this unless you are sure the project is already installed.'
+				),
+			addAliases: z
+				.boolean()
+				.optional()
+				.default(false)
+				.describe(
+					'Add shell aliases (tm, taskmaster) to shell config file. User input not needed.'
+				),
+			yes: z
+				.boolean()
+				.optional()
+				.default(false)
+				.describe(
+					"Skip prompts and use default values or provided arguments. Use true if you wish to skip details like the project name, etc. If the project information required for the initialization is not available or provided by the user, prompt if the user wishes to provide them (name, description, author) or skip them. If the user wishes to skip, set the 'yes' flag to true and do not set any other parameters."
+				),
+			projectRoot: z
+				.string()
+				.describe(
+					'The root directory for the project. ALWAYS SET THIS TO THE PROJECT ROOT DIRECTORY. IF NOT SET, THE TOOL WILL NOT WORK.'
+				)
+		}),
+		execute: async (args, context) => {
+			const { log } = context;
+			const session = context.session;
 
-        // Construct the command arguments carefully
-        // Using npx ensures it uses the locally installed version if available, or fetches it
-        let command = 'npx task-master init';
-        const cliArgs = [];
-        if (args.projectName) cliArgs.push(`--name "${args.projectName.replace(/"/g, '\\"')}"`); // Escape quotes
-        if (args.projectDescription) cliArgs.push(`--description "${args.projectDescription.replace(/"/g, '\\"')}"`);
-        if (args.projectVersion) cliArgs.push(`--version "${args.projectVersion.replace(/"/g, '\\"')}"`);
-        if (args.authorName) cliArgs.push(`--author "${args.authorName.replace(/"/g, '\\"')}"`);
-        if (args.skipInstall) cliArgs.push('--skip-install');
-        if (args.addAliases) cliArgs.push('--aliases');
-        if (args.yes) cliArgs.push('--yes');
+			log.info(
+				'>>> Full Context Received by Tool:',
+				JSON.stringify(context, null, 2)
+			);
+			log.info(`Context received in tool function: ${context}`);
+			log.info(
+				`Session received in tool function: ${session ? session : 'undefined'}`
+			);
 
-        command += ' ' + cliArgs.join(' ');
+			try {
+				log.info(
+					`Executing initialize_project tool with args: ${JSON.stringify(args)}`
+				);
 
-        log.info(`Constructed command: ${command}`);
+				const result = await initializeProjectDirect(args, log, { session });
 
-        // Execute the command in the current working directory of the server process
-        // Capture stdout/stderr. Use a reasonable timeout (e.g., 5 minutes)
-        const output = execSync(command, { encoding: 'utf8', stdio: 'pipe', timeout: 300000 });
-
-        log.info(`Initialization output:\n${output}`);
-
-        // Return a standard success response manually
-        return createContentResponse(
-             "Project initialized successfully.",
-             { output: output } // Include output in the data payload
-        );
-
-      } catch (error) {
-        // Catch errors from execSync or timeouts
-        const errorMessage = `Project initialization failed: ${error.message}`;
-        const errorDetails = error.stderr?.toString() || error.stdout?.toString() || error.message; // Provide stderr/stdout if available
-        log.error(`${errorMessage}\nDetails: ${errorDetails}`);
-
-        // Return a standard error response manually
-        return createErrorResponse(errorMessage, { details: errorDetails });
-      }
-    }
-  });
+				return handleApiResult(result, log, 'Initialization failed');
+			} catch (error) {
+				const errorMessage = `Project initialization tool failed: ${error.message || 'Unknown error'}`;
+				log.error(errorMessage, error);
+				return createErrorResponse(errorMessage, { details: error.stack });
+			}
+		}
+	});
 }

mcp-server/src/tools/next-task.js

@@ -3,61 +3,83 @@
  * Tool to find the next task to work on
  */
 
-import { z } from "zod";
+import { z } from 'zod';
 import {
-  handleApiResult,
-  createErrorResponse,
-  getProjectRootFromSession
-} from "./utils.js";
-import { nextTaskDirect } from "../core/task-master-core.js";
+	handleApiResult,
+	createErrorResponse,
+	getProjectRootFromSession
+} from './utils.js';
+import { nextTaskDirect } from '../core/task-master-core.js';
+import { findTasksJsonPath } from '../core/utils/path-utils.js';
 
 /**
  * Register the next-task tool with the MCP server
  * @param {Object} server - FastMCP server instance
  */
 export function registerNextTaskTool(server) {
-  server.addTool({
-    name: "next_task",
-    description: "Find the next task to work on based on dependencies and status",
-    parameters: z.object({
-      file: z.string().optional().describe("Path to the tasks file"),
-      projectRoot: z
-        .string()
-        .optional()
-        .describe(
-          "Root directory of the project (default: current working directory)"
-        ),
-    }),
-    execute: async (args, { log, session, reportProgress }) => {
-      try {
-        log.info(`Finding next task with args: ${JSON.stringify(args)}`);
-        // await reportProgress({ progress: 0 });
+	server.addTool({
+		name: 'next_task',
+		description:
+			'Find the next task to work on based on dependencies and status',
+		parameters: z.object({
+			file: z.string().optional().describe('Absolute path to the tasks file'),
+			projectRoot: z
+				.string()
+				.describe('The directory of the project. Must be an absolute path.')
+		}),
+		execute: async (args, { log, session }) => {
+			try {
+				log.info(`Finding next task with args: ${JSON.stringify(args)}`);
 
-        let rootFolder = getProjectRootFromSession(session, log);
+				// Get project root from args or session
+				const rootFolder =
+					args.projectRoot || getProjectRootFromSession(session, log);
 
-        if (!rootFolder && args.projectRoot) {
-          rootFolder = args.projectRoot;
-          log.info(`Using project root from args as fallback: ${rootFolder}`);
-        }
+				// Ensure project root was determined
+				if (!rootFolder) {
+					return createErrorResponse(
+						'Could not determine project root. Please provide it explicitly or ensure your session contains valid root information.'
+					);
+				}
 
-        const result = await nextTaskDirect({
-          projectRoot: rootFolder,
-          ...args
-        }, log/*, { reportProgress, mcpLog: log, session}*/);
+				// Resolve the path to tasks.json
+				let tasksJsonPath;
+				try {
+					tasksJsonPath = findTasksJsonPath(
+						{ projectRoot: rootFolder, file: args.file },
+						log
+					);
+				} catch (error) {
+					log.error(`Error finding tasks.json: ${error.message}`);
+					return createErrorResponse(
+						`Failed to find tasks.json: ${error.message}`
+					);
+				}
 
-        // await reportProgress({ progress: 100 });
+				const result = await nextTaskDirect(
+					{
+						// Pass the explicitly resolved path
+						tasksJsonPath: tasksJsonPath
+						// No other args specific to this tool
+					},
+					log
+				);
 
-        if (result.success) {
-          log.info(`Successfully found next task: ${result.data?.task?.id || 'No available tasks'}`);
-        } else {
-          log.error(`Failed to find next task: ${result.error?.message || 'Unknown error'}`);
-        }
+				if (result.success) {
+					log.info(
+						`Successfully found next task: ${result.data?.task?.id || 'No available tasks'}`
+					);
+				} else {
+					log.error(
+						`Failed to find next task: ${result.error?.message || 'Unknown error'}`
+					);
+				}
 
-        return handleApiResult(result, log, 'Error finding next task');
-      } catch (error) {
-        log.error(`Error in nextTask tool: ${error.message}`);
-        return createErrorResponse(error.message);
-      }
-    },
-  });
+				return handleApiResult(result, log, 'Error finding next task');
+			} catch (error) {
+				log.error(`Error in nextTask tool: ${error.message}`);
+				return createErrorResponse(error.message);
+			}
+		}
+	});
 }

mcp-server/src/tools/parse-prd.js

@@ -3,61 +3,108 @@
  * Tool to parse PRD document and generate tasks
  */
 
-import { z } from "zod";
+import { z } from 'zod';
 import {
-  handleApiResult,
-  createErrorResponse,
-  getProjectRootFromSession
-} from "./utils.js";
-import { parsePRDDirect } from "../core/task-master-core.js";
+	getProjectRootFromSession,
+	handleApiResult,
+	createErrorResponse
+} from './utils.js';
+import { parsePRDDirect } from '../core/task-master-core.js';
+import {
+	resolveProjectPaths,
+	findPRDDocumentPath,
+	resolveTasksOutputPath
+} from '../core/utils/path-utils.js';
 
 /**
  * Register the parsePRD tool with the MCP server
  * @param {Object} server - FastMCP server instance
  */
 export function registerParsePRDTool(server) {
-  server.addTool({
-    name: "parse_prd",
-    description: "Parse a Product Requirements Document (PRD) or text file to automatically generate initial tasks.",
-    parameters: z.object({
-      input: z.string().default("tasks/tasks.json").describe("Path to the PRD document file (relative to project root or absolute)"),
-      numTasks: z.string().optional().describe("Approximate number of top-level tasks to generate (default: 10)"),
-      output: z.string().optional().describe("Output path for tasks.json file (relative to project root or absolute, default: tasks/tasks.json)"),
-      force: z.boolean().optional().describe("Allow overwriting an existing tasks.json file."),
-      projectRoot: z
-        .string()
-        .optional()
-        .describe(
-          "Root directory of the project (default: automatically detected from session or CWD)"
-        ),
-    }),
-    execute: async (args, { log, session }) => {
-      try {
-        log.info(`Parsing PRD with args: ${JSON.stringify(args)}`);
+	server.addTool({
+		name: 'parse_prd',
+		description:
+			"Parse a Product Requirements Document (PRD) text file to automatically generate initial tasks. Reinitializing the project is not necessary to run this tool. It is recommended to run parse-prd after initializing the project and creating/importing a prd.txt file in the project root's scripts/ directory.",
+		parameters: z.object({
+			input: z
+				.string()
+				.optional()
+				.default('scripts/prd.txt')
+				.describe('Absolute path to the PRD document file (.txt, .md, etc.)'),
+			numTasks: z
+				.string()
+				.optional()
+				.describe(
+					'Approximate number of top-level tasks to generate (default: 10). As the agent, if you have enough information, ensure to enter a number of tasks that would logically scale with project complexity. Avoid entering numbers above 50 due to context window limitations.'
+				),
+			output: z
+				.string()
+				.optional()
+				.describe(
+					'Output path for tasks.json file (default: tasks/tasks.json)'
+				),
+			force: z
+				.boolean()
+				.optional()
+				.describe('Allow overwriting an existing tasks.json file.'),
+			projectRoot: z
+				.string()
+				.describe('The directory of the project. Must be absolute path.')
+		}),
+		execute: async (args, { log, session }) => {
+			try {
+				log.info(`Parsing PRD with args: ${JSON.stringify(args)}`);
 
-        let rootFolder = getProjectRootFromSession(session, log);
+				// Get project root from args or session
+				const rootFolder =
+					args.projectRoot || getProjectRootFromSession(session, log);
 
-        if (!rootFolder && args.projectRoot) {
-          rootFolder = args.projectRoot;
-          log.info(`Using project root from args as fallback: ${rootFolder}`);
-        }
+				if (!rootFolder) {
+					return createErrorResponse(
+						'Could not determine project root. Please provide it explicitly or ensure your session contains valid root information.'
+					);
+				}
 
-        const result = await parsePRDDirect({
-          projectRoot: rootFolder,
-          ...args
-        }, log, { session });
+				// Resolve input (PRD) and output (tasks.json) paths using the utility
+				const { projectRoot, prdPath, tasksJsonPath } = resolveProjectPaths(
+					rootFolder,
+					args,
+					log
+				);
 
-        if (result.success) {
-          log.info(`Successfully parsed PRD: ${result.data.message}`);
-        } else {
-          log.error(`Failed to parse PRD: ${result.error?.message || 'Unknown error'}`);
-        }
+				// Check if PRD path was found (resolveProjectPaths returns null if not found and not provided)
+				if (!prdPath) {
+					return createErrorResponse(
+						'No PRD document found or provided. Please ensure a PRD file exists (e.g., PRD.md) or provide a valid input file path.'
+					);
+				}
 
-        return handleApiResult(result, log, 'Error parsing PRD');
-      } catch (error) {
-        log.error(`Error in parse-prd tool: ${error.message}`);
-        return createErrorResponse(error.message);
-      }
-    },
-  });
+				// Call the direct function with fully resolved paths
+				const result = await parsePRDDirect(
+					{
+						projectRoot: projectRoot,
+						input: prdPath,
+						output: tasksJsonPath,
+						numTasks: args.numTasks,
+						force: args.force
+					},
+					log,
+					{ session }
+				);
+
+				if (result.success) {
+					log.info(`Successfully parsed PRD: ${result.data.message}`);
+				} else {
+					log.error(
+						`Failed to parse PRD: ${result.error?.message || 'Unknown error'}`
+					);
+				}
+
+				return handleApiResult(result, log, 'Error parsing PRD');
+			} catch (error) {
+				log.error(`Error in parse-prd tool: ${error.message}`);
+				return createErrorResponse(error.message);
+			}
+		}
+	});
 }

mcp-server/src/tools/remove-dependency.js

@@ -3,58 +3,89 @@
  * Tool for removing a dependency from a task
  */
 
-import { z } from "zod";
+import { z } from 'zod';
 import {
-  handleApiResult,
-  createErrorResponse,
-  getProjectRootFromSession
-} from "./utils.js";
-import { removeDependencyDirect } from "../core/task-master-core.js";
+	handleApiResult,
+	createErrorResponse,
+	getProjectRootFromSession
+} from './utils.js';
+import { removeDependencyDirect } from '../core/task-master-core.js';
+import { findTasksJsonPath } from '../core/utils/path-utils.js';
 
 /**
  * Register the removeDependency tool with the MCP server
  * @param {Object} server - FastMCP server instance
  */
 export function registerRemoveDependencyTool(server) {
-  server.addTool({
-    name: "remove_dependency",
-    description: "Remove a dependency from a task",
-    parameters: z.object({
-      id: z.string().describe("Task ID to remove dependency from"),
-      dependsOn: z.string().describe("Task ID to remove as a dependency"),
-      file: z.string().optional().describe("Path to the tasks file (default: tasks/tasks.json)"),
-      projectRoot: z.string().optional().describe("Root directory of the project (default: current working directory)")
-    }),
-    execute: async (args, { log, session, reportProgress }) => {
-      try {
-        log.info(`Removing dependency for task ${args.id} from ${args.dependsOn} with args: ${JSON.stringify(args)}`);
-        // await reportProgress({ progress: 0 });
+	server.addTool({
+		name: 'remove_dependency',
+		description: 'Remove a dependency from a task',
+		parameters: z.object({
+			id: z.string().describe('Task ID to remove dependency from'),
+			dependsOn: z.string().describe('Task ID to remove as a dependency'),
+			file: z
+				.string()
+				.optional()
+				.describe(
+					'Absolute path to the tasks file (default: tasks/tasks.json)'
+				),
+			projectRoot: z
+				.string()
+				.describe('The directory of the project. Must be an absolute path.')
+		}),
+		execute: async (args, { log, session }) => {
+			try {
+				log.info(
+					`Removing dependency for task ${args.id} from ${args.dependsOn} with args: ${JSON.stringify(args)}`
+				);
 
-        let rootFolder = getProjectRootFromSession(session, log);
+				// Get project root from args or session
+				const rootFolder =
+					args.projectRoot || getProjectRootFromSession(session, log);
 
-        if (!rootFolder && args.projectRoot) {
-          rootFolder = args.projectRoot;
-          log.info(`Using project root from args as fallback: ${rootFolder}`);
-        }
+				// Ensure project root was determined
+				if (!rootFolder) {
+					return createErrorResponse(
+						'Could not determine project root. Please provide it explicitly or ensure your session contains valid root information.'
+					);
+				}
 
-        const result = await removeDependencyDirect({
-          projectRoot: rootFolder,
-          ...args
-        }, log/*, { reportProgress, mcpLog: log, session}*/);
+				// Resolve the path to tasks.json
+				let tasksJsonPath;
+				try {
+					tasksJsonPath = findTasksJsonPath(
+						{ projectRoot: rootFolder, file: args.file },
+						log
+					);
+				} catch (error) {
+					log.error(`Error finding tasks.json: ${error.message}`);
+					return createErrorResponse(
+						`Failed to find tasks.json: ${error.message}`
+					);
+				}
 
-        // await reportProgress({ progress: 100 });
+				const result = await removeDependencyDirect(
+					{
+						// Pass the explicitly resolved path
+						tasksJsonPath: tasksJsonPath,
+						// Pass other relevant args
+						id: args.id,
+						dependsOn: args.dependsOn
+					},
+					log
+				);
 
-        if (result.success) {
-          log.info(`Successfully removed dependency: ${result.data.message}`);
-        } else {
-          log.error(`Failed to remove dependency: ${result.error.message}`);
-        }
+				if (result.success) {
+					log.info(`Successfully removed dependency: ${result.data.message}`);
+				} else {
+					log.error(`Failed to remove dependency: ${result.error.message}`);
+				}
 
-        return handleApiResult(result, log, 'Error removing dependency');
-      } catch (error) {
-        log.error(`Error in removeDependency tool: ${error.message}`);
-        return createErrorResponse(error.message);
-      }
-    }
-  });
+				return handleApiResult(result, log, 'Error removing dependency');
+			} catch (error) {
+				log.error(`Error in removeDependency tool: ${error.message}`);
+				return createErrorResponse(error.message);
+			}
+		}
+	});
 }

mcp-server/src/tools/remove-subtask.js

@@ -3,59 +3,101 @@
  * Tool for removing subtasks from parent tasks
  */
 
-import { z } from "zod";
+import { z } from 'zod';
 import {
-  handleApiResult,
-  createErrorResponse,
-  getProjectRootFromSession
-} from "./utils.js";
-import { removeSubtaskDirect } from "../core/task-master-core.js";
+	handleApiResult,
+	createErrorResponse,
+	getProjectRootFromSession
+} from './utils.js';
+import { removeSubtaskDirect } from '../core/task-master-core.js';
+import { findTasksJsonPath } from '../core/utils/path-utils.js';
 
 /**
  * Register the removeSubtask tool with the MCP server
  * @param {Object} server - FastMCP server instance
  */
 export function registerRemoveSubtaskTool(server) {
-  server.addTool({
-    name: "remove_subtask",
-    description: "Remove a subtask from its parent task",
-    parameters: z.object({
-      id: z.string().describe("Subtask ID to remove in format 'parentId.subtaskId' (required)"),
-      convert: z.boolean().optional().describe("Convert the subtask to a standalone task instead of deleting it"),
-      file: z.string().optional().describe("Path to the tasks file (default: tasks/tasks.json)"),
-      skipGenerate: z.boolean().optional().describe("Skip regenerating task files"),
-      projectRoot: z.string().optional().describe("Root directory of the project (default: current working directory)")
-    }),
-    execute: async (args, { log, session, reportProgress }) => {
-      try {
-        log.info(`Removing subtask with args: ${JSON.stringify(args)}`);
-        // await reportProgress({ progress: 0 });
+	server.addTool({
+		name: 'remove_subtask',
+		description: 'Remove a subtask from its parent task',
+		parameters: z.object({
+			id: z
+				.string()
+				.describe(
+					"Subtask ID to remove in format 'parentId.subtaskId' (required)"
+				),
+			convert: z
+				.boolean()
+				.optional()
+				.describe(
+					'Convert the subtask to a standalone task instead of deleting it'
+				),
+			file: z
+				.string()
+				.optional()
+				.describe(
+					'Absolute path to the tasks file (default: tasks/tasks.json)'
+				),
+			skipGenerate: z
+				.boolean()
+				.optional()
+				.describe('Skip regenerating task files'),
+			projectRoot: z
+				.string()
+				.describe('The directory of the project. Must be an absolute path.')
+		}),
+		execute: async (args, { log, session }) => {
+			try {
+				log.info(`Removing subtask with args: ${JSON.stringify(args)}`);
 
-        let rootFolder = getProjectRootFromSession(session, log);
+				// Get project root from args or session
+				const rootFolder =
+					args.projectRoot || getProjectRootFromSession(session, log);
 
-        if (!rootFolder && args.projectRoot) {
-          rootFolder = args.projectRoot;
-          log.info(`Using project root from args as fallback: ${rootFolder}`);
-        }
+				// Ensure project root was determined
+				if (!rootFolder) {
+					return createErrorResponse(
+						'Could not determine project root. Please provide it explicitly or ensure your session contains valid root information.'
+					);
+				}
 
-        const result = await removeSubtaskDirect({
-          projectRoot: rootFolder,
-          ...args
-        }, log/*, { reportProgress, mcpLog: log, session}*/);
+				// Resolve the path to tasks.json
+				let tasksJsonPath;
+				try {
+					tasksJsonPath = findTasksJsonPath(
+						{ projectRoot: rootFolder, file: args.file },
+						log
+					);
+				} catch (error) {
+					log.error(`Error finding tasks.json: ${error.message}`);
+					return createErrorResponse(
+						`Failed to find tasks.json: ${error.message}`
+					);
+				}
 
-        // await reportProgress({ progress: 100 });
+				const result = await removeSubtaskDirect(
+					{
+						// Pass the explicitly resolved path
+						tasksJsonPath: tasksJsonPath,
+						// Pass other relevant args
+						id: args.id,
+						convert: args.convert,
+						skipGenerate: args.skipGenerate
+					},
+					log
+				);
 
-        if (result.success) {
-          log.info(`Subtask removed successfully: ${result.data.message}`);
-        } else {
-          log.error(`Failed to remove subtask: ${result.error.message}`);
-        }
+				if (result.success) {
+					log.info(`Subtask removed successfully: ${result.data.message}`);
+				} else {
+					log.error(`Failed to remove subtask: ${result.error.message}`);
+				}
 
-        return handleApiResult(result, log, 'Error removing subtask');
-      } catch (error) {
-        log.error(`Error in removeSubtask tool: ${error.message}`);
-        return createErrorResponse(error.message);
-      }
-    },
-  });
+				return handleApiResult(result, log, 'Error removing subtask');
+			} catch (error) {
+				log.error(`Error in removeSubtask tool: ${error.message}`);
+				return createErrorResponse(error.message);
+			}
+		}
+	});
 }

mcp-server/src/tools/remove-task.js

@@ -3,69 +3,89 @@
  * Tool to remove a task by ID
  */
 
-import { z } from "zod";
+import { z } from 'zod';
 import {
-  handleApiResult,
-  createErrorResponse,
-  getProjectRootFromSession
-} from "./utils.js";
-import { removeTaskDirect } from "../core/task-master-core.js";
+	handleApiResult,
+	createErrorResponse,
+	getProjectRootFromSession
+} from './utils.js';
+import { removeTaskDirect } from '../core/task-master-core.js';
+import { findTasksJsonPath } from '../core/utils/path-utils.js';
 
 /**
  * Register the remove-task tool with the MCP server
  * @param {Object} server - FastMCP server instance
  */
 export function registerRemoveTaskTool(server) {
-  server.addTool({
-    name: "remove_task",
-    description: "Remove a task or subtask permanently from the tasks list",
-    parameters: z.object({
-      id: z.string().describe("ID of the task or subtask to remove (e.g., '5' or '5.2')"),
-      file: z.string().optional().describe("Path to the tasks file"),
-      projectRoot: z
-        .string()
-        .optional()
-        .describe(
-          "Root directory of the project (default: current working directory)"
-        ),
-      confirm: z.boolean().optional().describe("Whether to skip confirmation prompt (default: false)")
-    }),
-    execute: async (args, { log, session }) => {
-      try {
-        log.info(`Removing task with ID: ${args.id}`);
+	server.addTool({
+		name: 'remove_task',
+		description: 'Remove a task or subtask permanently from the tasks list',
+		parameters: z.object({
+			id: z
+				.string()
+				.describe("ID of the task or subtask to remove (e.g., '5' or '5.2')"),
+			file: z.string().optional().describe('Absolute path to the tasks file'),
+			projectRoot: z
+				.string()
+				.describe('The directory of the project. Must be an absolute path.'),
+			confirm: z
+				.boolean()
+				.optional()
+				.describe('Whether to skip confirmation prompt (default: false)')
+		}),
+		execute: async (args, { log, session }) => {
+			try {
+				log.info(`Removing task with ID: ${args.id}`);
 
-        // Get project root from session
-        let rootFolder = getProjectRootFromSession(session, log);
+				// Get project root from args or session
+				const rootFolder =
+					args.projectRoot || getProjectRootFromSession(session, log);
 
-        if (!rootFolder && args.projectRoot) {
-          rootFolder = args.projectRoot;
-          log.info(`Using project root from args as fallback: ${rootFolder}`);
-        } else if (!rootFolder) {
-          // Ensure we have a default if nothing else works
-          rootFolder = process.cwd();
-          log.warn(`Session and args failed to provide root, using CWD: ${rootFolder}`);
-        }
+				// Ensure project root was determined
+				if (!rootFolder) {
+					return createErrorResponse(
+						'Could not determine project root. Please provide it explicitly or ensure your session contains valid root information.'
+					);
+				}
 
-        log.info(`Using project root: ${rootFolder}`);
+				log.info(`Using project root: ${rootFolder}`);
 
-        // Assume client has already handled confirmation if needed
-        const result = await removeTaskDirect({
-          id: args.id,
-          file: args.file,
-          projectRoot: rootFolder
-        }, log);
+				// Resolve the path to tasks.json
+				let tasksJsonPath;
+				try {
+					tasksJsonPath = findTasksJsonPath(
+						{ projectRoot: rootFolder, file: args.file },
+						log
+					);
+				} catch (error) {
+					log.error(`Error finding tasks.json: ${error.message}`);
+					return createErrorResponse(
+						`Failed to find tasks.json: ${error.message}`
+					);
+				}
 
-        if (result.success) {
-          log.info(`Successfully removed task: ${args.id}`);
-        } else {
-          log.error(`Failed to remove task: ${result.error.message}`);
-        }
+				log.info(`Using tasks file path: ${tasksJsonPath}`);
 
-        return handleApiResult(result, log, 'Error removing task');
-      } catch (error) {
-        log.error(`Error in remove-task tool: ${error.message}`);
-        return createErrorResponse(`Failed to remove task: ${error.message}`);
-      }
-    },
-  });
+				// Assume client has already handled confirmation if needed
+				const result = await removeTaskDirect(
+					{
+						tasksJsonPath: tasksJsonPath,
+						id: args.id
+					},
+					log
+				);
+
+				if (result.success) {
+					log.info(`Successfully removed task: ${args.id}`);
+				} else {
+					log.error(`Failed to remove task: ${result.error.message}`);
+				}
+
+				return handleApiResult(result, log, 'Error removing task');
+			} catch (error) {
+				log.error(`Error in remove-task tool: ${error.message}`);
+				return createErrorResponse(`Failed to remove task: ${error.message}`);
+			}
+		}
+	});
 }

mcp-server/src/tools/set-task-status.js

@@ -3,68 +3,99 @@
  * Tool to set the status of a task
  */
 
-import { z } from "zod";
+import { z } from 'zod';
 import {
-  handleApiResult,
-  createErrorResponse,
-  getProjectRootFromSession
-} from "./utils.js";
-import { setTaskStatusDirect } from "../core/task-master-core.js";
+	handleApiResult,
+	createErrorResponse,
+	getProjectRootFromSession
+} from './utils.js';
+import { setTaskStatusDirect } from '../core/task-master-core.js';
+import { findTasksJsonPath } from '../core/utils/path-utils.js';
 
 /**
  * Register the setTaskStatus tool with the MCP server
  * @param {Object} server - FastMCP server instance
  */
 export function registerSetTaskStatusTool(server) {
-  server.addTool({
-    name: "set_task_status",
-    description: "Set the status of one or more tasks or subtasks.",
-    parameters: z.object({
-      id: z
-        .string()
-        .describe("Task ID or subtask ID (e.g., '15', '15.2'). Can be comma-separated for multiple updates."),
-      status: z
-        .string()
-        .describe("New status to set (e.g., 'pending', 'done', 'in-progress', 'review', 'deferred', 'cancelled'."),
-      file: z.string().optional().describe("Path to the tasks file"),
-      projectRoot: z
-        .string()
-        .optional()
-        .describe(
-          "Root directory of the project (default: automatically detected)"
-        ),
-    }),
-    execute: async (args, { log, session }) => {
-      try {
-        log.info(`Setting status of task(s) ${args.id} to: ${args.status}`);
+	server.addTool({
+		name: 'set_task_status',
+		description: 'Set the status of one or more tasks or subtasks.',
+		parameters: z.object({
+			id: z
+				.string()
+				.describe(
+					"Task ID or subtask ID (e.g., '15', '15.2'). Can be comma-separated for multiple updates."
+				),
+			status: z
+				.string()
+				.describe(
+					"New status to set (e.g., 'pending', 'done', 'in-progress', 'review', 'deferred', 'cancelled'."
+				),
+			file: z.string().optional().describe('Absolute path to the tasks file'),
+			projectRoot: z
+				.string()
+				.describe('The directory of the project. Must be an absolute path.')
+		}),
+		execute: async (args, { log, session }) => {
+			try {
+				log.info(`Setting status of task(s) ${args.id} to: ${args.status}`);
 
-        // Get project root from session
-        let rootFolder = getProjectRootFromSession(session, log);
+				// Get project root from args or session
+				const rootFolder =
+					args.projectRoot || getProjectRootFromSession(session, log);
 
-        if (!rootFolder && args.projectRoot) {
-          rootFolder = args.projectRoot;
-          log.info(`Using project root from args as fallback: ${rootFolder}`);
-        }
+				// Ensure project root was determined
+				if (!rootFolder) {
+					return createErrorResponse(
+						'Could not determine project root. Please provide it explicitly or ensure your session contains valid root information.'
+					);
+				}
 
-        // Call the direct function with the project root
-        const result = await setTaskStatusDirect({
-          ...args,
-          projectRoot: rootFolder
-        }, log);
+				// Resolve the path to tasks.json
+				let tasksJsonPath;
+				try {
+					tasksJsonPath = findTasksJsonPath(
+						{ projectRoot: rootFolder, file: args.file },
+						log
+					);
+				} catch (error) {
+					log.error(`Error finding tasks.json: ${error.message}`);
+					return createErrorResponse(
+						`Failed to find tasks.json: ${error.message}`
+					);
+				}
 
-        // Log the result
-        if (result.success) {
-          log.info(`Successfully updated status for task(s) ${args.id} to "${args.status}": ${result.data.message}`);
-        } else {
-          log.error(`Failed to update task status: ${result.error?.message || 'Unknown error'}`);
-        }
+				// Call the direct function with the resolved path
+				const result = await setTaskStatusDirect(
+					{
+						// Pass the explicitly resolved path
+						tasksJsonPath: tasksJsonPath,
+						// Pass other relevant args
+						id: args.id,
+						status: args.status
+					},
+					log
+				);
 
-        // Format and return the result
-        return handleApiResult(result, log, 'Error setting task status');
-      } catch (error) {
-        log.error(`Error in setTaskStatus tool: ${error.message}`);
-        return createErrorResponse(`Error setting task status: ${error.message}`);
-      }
-    },
-  });
+				// Log the result
+				if (result.success) {
+					log.info(
+						`Successfully updated status for task(s) ${args.id} to "${args.status}": ${result.data.message}`
+					);
+				} else {
+					log.error(
+						`Failed to update task status: ${result.error?.message || 'Unknown error'}`
+					);
+				}
+
+				// Format and return the result
+				return handleApiResult(result, log, 'Error setting task status');
+			} catch (error) {
+				log.error(`Error in setTaskStatus tool: ${error.message}`);
+				return createErrorResponse(
+					`Error setting task status: ${error.message}`
+				);
+			}
+		}
+	});
 }

mcp-server/src/tools/update-subtask.js

@@ -3,61 +3,95 @@
  * Tool to append additional information to a specific subtask
  */
 
-import { z } from "zod";
+import { z } from 'zod';
 import {
-  handleApiResult,
-  createErrorResponse,
-  getProjectRootFromSession
-} from "./utils.js";
-import { updateSubtaskByIdDirect } from "../core/task-master-core.js";
+	handleApiResult,
+	createErrorResponse,
+	getProjectRootFromSession
+} from './utils.js';
+import { updateSubtaskByIdDirect } from '../core/task-master-core.js';
+import { findTasksJsonPath } from '../core/utils/path-utils.js';
 
 /**
  * Register the update-subtask tool with the MCP server
  * @param {Object} server - FastMCP server instance
  */
 export function registerUpdateSubtaskTool(server) {
-  server.addTool({
-    name: "update_subtask",
-    description: "Appends additional information to a specific subtask without replacing existing content",
-    parameters: z.object({
-      id: z.string().describe("ID of the subtask to update in format \"parentId.subtaskId\" (e.g., \"5.2\")"),
-      prompt: z.string().describe("Information to add to the subtask"),
-      research: z.boolean().optional().describe("Use Perplexity AI for research-backed updates"),
-      file: z.string().optional().describe("Path to the tasks file"),
-      projectRoot: z
-        .string()
-        .optional()
-        .describe(
-          "Root directory of the project (default: current working directory)"
-        ),
-    }),
-    execute: async (args, { log, session }) => {
-      try {
-        log.info(`Updating subtask with args: ${JSON.stringify(args)}`);
+	server.addTool({
+		name: 'update_subtask',
+		description:
+			'Appends additional information to a specific subtask without replacing existing content',
+		parameters: z.object({
+			id: z
+				.string()
+				.describe(
+					'ID of the subtask to update in format "parentId.subtaskId" (e.g., "5.2")'
+				),
+			prompt: z.string().describe('Information to add to the subtask'),
+			research: z
+				.boolean()
+				.optional()
+				.describe('Use Perplexity AI for research-backed updates'),
+			file: z.string().optional().describe('Absolute path to the tasks file'),
+			projectRoot: z
+				.string()
+				.describe('The directory of the project. Must be an absolute path.')
+		}),
+		execute: async (args, { log, session }) => {
+			try {
+				log.info(`Updating subtask with args: ${JSON.stringify(args)}`);
 
-        let rootFolder = getProjectRootFromSession(session, log);
+				// Get project root from args or session
+				const rootFolder =
+					args.projectRoot || getProjectRootFromSession(session, log);
 
-        if (!rootFolder && args.projectRoot) {
-          rootFolder = args.projectRoot;
-          log.info(`Using project root from args as fallback: ${rootFolder}`);
-        }
+				// Ensure project root was determined
+				if (!rootFolder) {
+					return createErrorResponse(
+						'Could not determine project root. Please provide it explicitly or ensure your session contains valid root information.'
+					);
+				}
 
-        const result = await updateSubtaskByIdDirect({
-          projectRoot: rootFolder,
-          ...args
-        }, log, { session });
+				// Resolve the path to tasks.json
+				let tasksJsonPath;
+				try {
+					tasksJsonPath = findTasksJsonPath(
+						{ projectRoot: rootFolder, file: args.file },
+						log
+					);
+				} catch (error) {
+					log.error(`Error finding tasks.json: ${error.message}`);
+					return createErrorResponse(
+						`Failed to find tasks.json: ${error.message}`
+					);
+				}
 
-        if (result.success) {
-          log.info(`Successfully updated subtask with ID ${args.id}`);
-        } else {
-          log.error(`Failed to update subtask: ${result.error?.message || 'Unknown error'}`);
-        }
+				const result = await updateSubtaskByIdDirect(
+					{
+						// Pass the explicitly resolved path
+						tasksJsonPath: tasksJsonPath,
+						// Pass other relevant args
+						id: args.id,
+						prompt: args.prompt,
+						research: args.research
+					},
+					log,
+					{ session }
+				);
 
-        return handleApiResult(result, log, 'Error updating subtask');
-      } catch (error) {
-        log.error(`Error in update_subtask tool: ${error.message}`);
-        return createErrorResponse(error.message);
-      }
-    },
-  });
+				if (result.success) {
+					log.info(`Successfully updated subtask with ID ${args.id}`);
+				} else {
+					log.error(
+						`Failed to update subtask: ${result.error?.message || 'Unknown error'}`
+					);
+				}
+
+				return handleApiResult(result, log, 'Error updating subtask');
+			} catch (error) {
+				log.error(`Error in update_subtask tool: ${error.message}`);
+				return createErrorResponse(error.message);
+			}
+		}
+	});
 }

mcp-server/src/tools/update-task.js

@@ -3,61 +3,95 @@
  * Tool to update a single task by ID with new information
  */
 
-import { z } from "zod";
+import { z } from 'zod';
 import {
-  handleApiResult,
-  createErrorResponse,
-  getProjectRootFromSession
-} from "./utils.js";
-import { updateTaskByIdDirect } from "../core/task-master-core.js";
+	handleApiResult,
+	createErrorResponse,
+	getProjectRootFromSession
+} from './utils.js';
+import { updateTaskByIdDirect } from '../core/task-master-core.js';
+import { findTasksJsonPath } from '../core/utils/path-utils.js';
 
 /**
  * Register the update-task tool with the MCP server
  * @param {Object} server - FastMCP server instance
  */
 export function registerUpdateTaskTool(server) {
-  server.addTool({
-    name: "update_task",
-    description: "Updates a single task by ID with new information or context provided in the prompt.",
-    parameters: z.object({
-      id: z.string().describe("ID of the task or subtask (e.g., '15', '15.2') to update"),
-      prompt: z.string().describe("New information or context to incorporate into the task"),
-      research: z.boolean().optional().describe("Use Perplexity AI for research-backed updates"),
-      file: z.string().optional().describe("Path to the tasks file"),
-      projectRoot: z
-        .string()
-        .optional()
-        .describe(
-          "Root directory of the project (default: current working directory)"
-        ),
-    }),
-    execute: async (args, { log, session }) => {
-      try {
-        log.info(`Updating task with args: ${JSON.stringify(args)}`);
+	server.addTool({
+		name: 'update_task',
+		description:
+			'Updates a single task by ID with new information or context provided in the prompt.',
+		parameters: z.object({
+			id: z
+				.string()
+				.describe("ID of the task or subtask (e.g., '15', '15.2') to update"),
+			prompt: z
+				.string()
+				.describe('New information or context to incorporate into the task'),
+			research: z
+				.boolean()
+				.optional()
+				.describe('Use Perplexity AI for research-backed updates'),
+			file: z.string().optional().describe('Absolute path to the tasks file'),
+			projectRoot: z
+				.string()
+				.describe('The directory of the project. Must be an absolute path.')
+		}),
+		execute: async (args, { log, session }) => {
+			try {
+				log.info(`Updating task with args: ${JSON.stringify(args)}`);
 
-        let rootFolder = getProjectRootFromSession(session, log);
+				// Get project root from args or session
+				const rootFolder =
+					args.projectRoot || getProjectRootFromSession(session, log);
 
-        if (!rootFolder && args.projectRoot) {
-          rootFolder = args.projectRoot;
-          log.info(`Using project root from args as fallback: ${rootFolder}`);
-        }
+				// Ensure project root was determined
+				if (!rootFolder) {
+					return createErrorResponse(
+						'Could not determine project root. Please provide it explicitly or ensure your session contains valid root information.'
+					);
+				}
 
-        const result = await updateTaskByIdDirect({
-          projectRoot: rootFolder,
-          ...args
-        }, log, { session });
+				// Resolve the path to tasks.json
+				let tasksJsonPath;
+				try {
+					tasksJsonPath = findTasksJsonPath(
+						{ projectRoot: rootFolder, file: args.file },
+						log
+					);
+				} catch (error) {
+					log.error(`Error finding tasks.json: ${error.message}`);
+					return createErrorResponse(
+						`Failed to find tasks.json: ${error.message}`
+					);
+				}
 
-        if (result.success) {
-          log.info(`Successfully updated task with ID ${args.id}`);
-        } else {
-          log.error(`Failed to update task: ${result.error?.message || 'Unknown error'}`);
-        }
+				const result = await updateTaskByIdDirect(
+					{
+						// Pass the explicitly resolved path
+						tasksJsonPath: tasksJsonPath,
+						// Pass other relevant args
+						id: args.id,
+						prompt: args.prompt,
+						research: args.research
+					},
+					log,
+					{ session }
+				);
 
-        return handleApiResult(result, log, 'Error updating task');
-      } catch (error) {
-        log.error(`Error in update_task tool: ${error.message}`);
-        return createErrorResponse(error.message);
-      }
-    },
-  });
+				if (result.success) {
+					log.info(`Successfully updated task with ID ${args.id}`);
+				} else {
+					log.error(
+						`Failed to update task: ${result.error?.message || 'Unknown error'}`
+					);
+				}
+
+				return handleApiResult(result, log, 'Error updating task');
+			} catch (error) {
+				log.error(`Error in update_task tool: ${error.message}`);
+				return createErrorResponse(error.message);
+			}
+		}
+	});
 }