only run rules interactive setup if not provided via command line

scripts/init.js

@@ -399,7 +399,12 @@ async function initializeProject(options = {}) {
 			}
 
 			// === Brand Rules Selection (via shared module) ===
-			const selectedBrandRules = await runInteractiveRulesSetup();
+			// Only run interactive rules setup if rules weren't explicitly provided via command line
+			if (options.rulesExplicitlyProvided) {
+				log('info', `Using rules provided via command line: ${selectedBrandRules.join(', ')}`);
+			} else {
+				selectedBrandRules = await runInteractiveRulesSetup();
+			}
 
 			const dryRun = options.dryRun || false;
 
@@ -418,21 +423,6 @@ async function initializeProject(options = {}) {
 			// Create structure using only necessary values
 			createProjectStructure(addAliasesPrompted, dryRun, selectedBrandRules);
 
-			for (const rule of selectedBrandRules) {
-				const profile = BRAND_PROFILES[rule];
-				if (profile) {
-					convertAllRulesToBrandRules(targetDir, profile);
-					// Ensure MCP config is set up under the correct brand folder
-					if (rule === 'windsurf' || rule === 'roo') {
-					}
-				} else {
-					log('warn', `Unknown rules profile: ${rule}`);
-				}
-			}
-			// fallback for safety if selectedBrandRules is not an array
-			if (!Array.isArray(selectedBrandRules)) {
-				convertAllRulesToBrandRules(targetDir, BRAND_PROFILES['cursor']);
-			}
 		} catch (error) {
 			rl.close();
 			log('error', `Error during initialization process: ${error.message}`);

scripts/modules/commands.js

@@ -2126,6 +2126,7 @@ function registerCommands(programInstance) {
 			// cmdOptions contains parsed arguments
 			// Parse rules: accept space or comma separated, default to all available rules
 			let selectedBrands = BRAND_NAMES;
+			let rulesExplicitlyProvided = false;
 			
 			if (cmdOptions.rules && Array.isArray(cmdOptions.rules)) {
 				const userSpecifiedBrands = cmdOptions.rules
@@ -2135,17 +2136,14 @@ function registerCommands(programInstance) {
 				// Only override defaults if user specified valid rules
 				if (userSpecifiedBrands.length > 0) {
 					selectedBrands = userSpecifiedBrands;
+					rulesExplicitlyProvided = true;
 				}
 			}
 			
 			cmdOptions.rules = selectedBrands;
+			cmdOptions.rulesExplicitlyProvided = rulesExplicitlyProvided;
 			
 			try {
-				console.log('DEBUG: Running init command action in commands.js');
-				console.log(
-					'DEBUG: Options received by action:',
-					JSON.stringify(cmdOptions)
-				);
 				// Directly call the initializeProject function, passing the parsed options
 				await initializeProject(cmdOptions);
 				// initializeProject handles its own flow, including potential process.exit()