feat: update resumeFeature API to support optional useWorktrees parameter

- Modified the resumeFeature method across multiple files to accept an optional useWorktrees parameter, defaulting to false for improved control over worktree usage.
- Updated related hooks and service methods to ensure consistent handling of the new parameter.
- Enhanced server route logic to reflect the change, ensuring worktrees are only utilized when explicitly enabled.

apps/app/src/lib/electron.ts

@@ -233,7 +233,8 @@ export interface AutoModeAPI {
   ) => Promise<{ success: boolean; passes?: boolean; error?: string }>;
   resumeFeature: (
     projectPath: string,
-    featureId: string
+    featureId: string,
+    useWorktrees?: boolean
   ) => Promise<{ success: boolean; passes?: boolean; error?: string }>;
   contextExists: (
     projectPath: string,
@@ -1464,7 +1465,7 @@ function createMockAutoModeAPI(): AutoModeAPI {
       return { success: true, passes: true };
     },
 
-    resumeFeature: async (projectPath: string, featureId: string) => {
+    resumeFeature: async (projectPath: string, featureId: string, useWorktrees?: boolean) => {
       if (mockRunningFeatures.has(featureId)) {
         return {
           success: false,

apps/app/src/lib/http-api-client.ts

@@ -536,8 +536,8 @@ export class HttpApiClient implements ElectronAPI {
       }),
     verifyFeature: (projectPath: string, featureId: string) =>
       this.post("/api/auto-mode/verify-feature", { projectPath, featureId }),
-    resumeFeature: (projectPath: string, featureId: string) =>
-      this.post("/api/auto-mode/resume-feature", { projectPath, featureId }),
+    resumeFeature: (projectPath: string, featureId: string, useWorktrees?: boolean) =>
+      this.post("/api/auto-mode/resume-feature", { projectPath, featureId, useWorktrees }),
     contextExists: (projectPath: string, featureId: string) =>
       this.post("/api/auto-mode/context-exists", { projectPath, featureId }),
     analyzeProject: (projectPath: string) =>