refactor: update permission handling and optimize performance measurement

- Changed permissionMode settings in enhance and generate title routes to improve edit acceptance and default behavior.
- Refactored performance measurement cleanup in the App component to only execute in development mode, preventing unnecessary operations in production.
- Simplified the startServerAndWait function signature for better readability.

apps/server/src/routes/enhance-prompt/routes/enhance.ts

@@ -164,9 +164,7 @@ export function createEnhanceHandler(
           systemPrompt,
           maxTurns: 1,
           allowedTools: [],
-          // AUTONOMOUS MODE: Always bypass permissions
-          permissionMode: 'bypassPermissions',
-          allowDangerouslySkipPermissions: true,
+          permissionMode: 'acceptEdits',
         },
       });
 

apps/server/src/routes/features/routes/generate-title.ts

@@ -96,9 +96,7 @@ export function createGenerateTitleHandler(): (req: Request, res: Response) => P
           systemPrompt: SYSTEM_PROMPT,
           maxTurns: 1,
           allowedTools: [],
-          // AUTONOMOUS MODE: Always bypass permissions
-          permissionMode: 'bypassPermissions',
-          allowDangerouslySkipPermissions: true,
+          permissionMode: 'default',
         },
       });