feat: refactor development and production launch scripts

- Introduced `dev.mjs` for development mode with hot reloading using Vite.
- Added `start.mjs` for production mode, serving pre-built static files without hot reloading.
- Created a new utility module `launcher-utils.mjs` for shared functions across scripts.
- Updated package.json scripts to reflect new launch commands.
- Removed deprecated `init.mjs` and associated MCP permission settings from the codebase.
- Added `.dockerignore` and updated `.gitignore` for better environment management.
- Enhanced README with updated usage instructions for starting the application.

apps/ui/src/hooks/use-settings-migration.ts

@@ -230,8 +230,6 @@ export async function syncSettingsToServer(): Promise<boolean> {
       keyboardShortcuts: state.keyboardShortcuts,
       aiProfiles: state.aiProfiles,
       mcpServers: state.mcpServers,
-      mcpAutoApproveTools: state.mcpAutoApproveTools,
-      mcpUnrestrictedTools: state.mcpUnrestrictedTools,
       promptCustomization: state.promptCustomization,
       projects: state.projects,
       trashedProjects: state.trashedProjects,
@@ -336,12 +334,10 @@ export async function loadMCPServersFromServer(): Promise<boolean> {
     }
 
     const mcpServers = result.settings.mcpServers || [];
-    const mcpAutoApproveTools = result.settings.mcpAutoApproveTools ?? true;
-    const mcpUnrestrictedTools = result.settings.mcpUnrestrictedTools ?? true;
 
     // Clear existing and add all from server
     // We need to update the store directly since we can't use hooks here
-    useAppStore.setState({ mcpServers, mcpAutoApproveTools, mcpUnrestrictedTools });
+    useAppStore.setState({ mcpServers });
 
     console.log(`[Settings Load] Loaded ${mcpServers.length} MCP servers from server`);
     return true;