Add centralized path resolution module (autocoder_paths.py) that
consolidates all autocoder-generated file paths behind a dual-path
strategy: check .autocoder/X first, fall back to root-level X for
backward compatibility, default to .autocoder/X for new projects.
Key changes:
- New autocoder_paths.py with dual-path resolution for features.db,
assistant.db, lock files, settings, prompts dir, and progress cache
- migrate_project_layout() safely moves old-layout projects to new
layout with SQLite WAL flush and integrity verification
- Updated 22 files to delegate path construction to autocoder_paths
- Reset/delete logic cleans both old and new file locations
- Orphan lock cleanup checks both locations per project
- Migration called automatically at agent start in autonomous_agent_demo.py
- Updated markdown commands/skills to reference .autocoder/prompts/
- CLAUDE.md documentation updated with new project structure
Files at project root that remain unchanged:
- CLAUDE.md (Claude SDK reads from cwd via setting_sources=["project"])
- app_spec.txt root copy (agent templates reference it via cat)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Add the ability to reset a project to its initial state with two options:
- Quick Reset: Clears features.db, assistant.db, and settings files while
preserving app spec and prompts
- Full Reset: Deletes everything including prompts directory, triggering
the setup wizard for project reconfiguration
Backend changes:
- Add POST /{name}/reset endpoint to projects router with full_reset query param
- Validate agent lock file to prevent reset while agent is running (409 Conflict)
- Dispose database engines before deleting files to release Windows file locks
- Add engine caching to api/database.py for better connection management
- Add dispose_engine() functions to both database modules
- Delete WAL mode journal files (*.db-wal, *.db-shm) during reset
Frontend changes:
- Add ResetProjectModal component with toggle between Quick/Full reset modes
- Add ProjectSetupRequired component shown when has_spec is false
- Add resetProject API function and useResetProject React Query hook
- Integrate reset button in header (disabled when agent running)
- Add 'R' keyboard shortcut to open reset modal
- Show ProjectSetupRequired when project needs setup after full reset
This implements the feature from PR #4 directly on master to avoid merge
conflicts.
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Add `default_concurrency` column to the projects table in the registry
database, allowing each project to remember its preferred concurrency
setting (1-5 agents). The value persists across page refreshes and
app restarts.
Backend changes:
- Add `default_concurrency` column to Project model in registry.py
- Add database migration for existing databases (ALTER TABLE)
- Add get/set_project_concurrency() CRUD functions
- Add ProjectSettingsUpdate schema with validation
- Add PATCH /{name}/settings endpoint in projects router
- Include default_concurrency in ProjectSummary/ProjectDetail responses
Frontend changes:
- Add default_concurrency to ProjectSummary TypeScript interface
- Add ProjectSettingsUpdate type and updateProjectSettings API function
- Add useUpdateProjectSettings React Query mutation hook
- Update AgentControl to accept defaultConcurrency prop
- Sync local state when project changes via useEffect
- Debounce slider changes (500ms) before saving to backend
- Pass defaultConcurrency from selectedProjectData in App.tsx
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Remove automatic subfolder creation when creating projects. Users now
select the exact folder they want to use, enabling support for existing
projects without requiring folder names to match project names.
Changes:
- NewProjectModal.tsx: Remove path concatenation that appended project
name to selected folder. Update instruction text to clarify users
select THE project folder, not a parent location.
- FolderBrowser.tsx: Add visual indicator "This folder will contain
all project files" to clarify selection behavior.
- projects.py: Add duplicate path validation to prevent multiple
projects from registering the same directory. Includes case-insensitive
path comparison on Windows for proper cross-platform support.
This allows users to:
- Use Auto Coder on existing projects by selecting their folder directly
- Have project names that differ from folder names (name is a registry label)
- Get clear feedback when a path is already registered under another name
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
- Add CI workflow with Python (ruff lint, security tests) and UI (ESLint, TypeScript, build) jobs
- Add ruff, mypy, pytest to requirements.txt
- Add pyproject.toml with ruff configuration
- Fix import sorting across Python files (ruff --fix)
- Fix test_security.py expectations to match actual security policy
- Remove invalid 'eof' command from ALLOWED_COMMANDS
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
This major update replaces the fixed `generations/` directory with support
for storing projects in any directory on the filesystem. Projects are now
tracked via a cross-platform registry system.
## New Features
### Project Registry (`registry.py`)
- Cross-platform registry storing project name-to-path mappings
- Platform-specific config locations:
- Windows: %APPDATA%\autonomous-coder\projects.json
- macOS: ~/Library/Application Support/autonomous-coder/projects.json
- Linux: ~/.config/autonomous-coder/projects.json
- POSIX path format for cross-platform compatibility
- File locking for concurrent access safety (fcntl/msvcrt)
- Atomic writes via temp file + rename to prevent corruption
- Fixed Windows file locking issue with tempfile.mkstemp()
### Filesystem Browser API (`server/routers/filesystem.py`)
- REST endpoints for browsing directories server-side
- Cross-platform support with blocked system paths:
- Windows: C:\Windows, Program Files, ProgramData, etc.
- macOS: /System, /Library, /private, etc.
- Linux: /etc, /var, /usr, /bin, etc.
- Universal blocked paths: .ssh, .aws, .gnupg, .docker, etc.
- Hidden file detection (Unix dot-prefix + Windows attributes)
- UNC path blocking for security
- Windows drive enumeration via ctypes
- Directory creation with validation
- Added `has_children` field to DirectoryEntry schema
### UI Folder Browser (`ui/src/components/FolderBrowser.tsx`)
- React component for selecting project directories
- Breadcrumb navigation with clickable segments
- Windows drive selector
- New folder creation inline
- Fixed text visibility with explicit color values
## Updated Components
### Server Routers
- `projects.py`: Uses registry instead of fixed generations/ directory
- `agent.py`: Uses registry for project path lookups
- `features.py`: Uses registry for database path resolution
- `spec_creation.py`: Uses registry for WebSocket project resolution
### Process Manager (`server/services/process_manager.py`)
- Fixed sandbox issue: subprocess now uses project_dir as cwd
- This allows the Claude SDK sandbox to access external project directories
### Schemas (`server/schemas.py`)
- Added `has_children` to DirectoryEntry
- Added `in_progress` to ProjectStats
- Added path field to ProjectSummary and ProjectDetail
### UI Components
- `NewProjectModal.tsx`: Multi-step wizard with folder selection
- Added clarifying text about subfolder creation
- Fixed text color visibility issues
### API Client (`ui/src/lib/api.ts`)
- Added filesystem API functions (listDirectory, createDirectory)
- Fixed Windows path splitting for directory creation
### Documentation
- Updated CLAUDE.md with registry system details
- Updated command examples for absolute paths
## Security Improvements
- Blocked `.` and `..` in directory names to prevent traversal
- Added path blocking check in project creation
- UNC path blocking throughout filesystem API
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Implements feature locking to prevent multiple agent sessions from working
on the same feature simultaneously. This is essential for parallel agent
execution.
Database changes:
- Add `in_progress` boolean column to Feature model
- Add migration function to handle existing databases
MCP Server tools:
- Add `feature_mark_in_progress` - lock feature when starting work
- Add `feature_clear_in_progress` - unlock feature when abandoning
- Update `feature_get_next` to skip in-progress features
- Update `feature_get_stats` to include in_progress count
- Update `feature_mark_passing` and `feature_skip` to clear in_progress
Backend updates:
- Update progress.py to track and display in_progress count
- Update features router to properly categorize in-progress features
- Update WebSocket to broadcast in_progress in progress updates
- Add in_progress to FeatureResponse schema
Frontend updates:
- Add in_progress to TypeScript types (Feature, ProjectStats, WSProgressMessage)
- Update useWebSocket hook to track in_progress state
Prompt template:
- Add instructions for agents to mark features in-progress immediately
- Document new MCP tools in allowed tools section
Also fixes spec_chat_session.py to use absolute project path instead of
relative path for consistency with CLI behavior.
🤖 Generated with [Claude Code](https://claude.com/claude-code)
Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
