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feat: move autocoder runtime files into .autocoder/ subdirectory

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Add centralized path resolution module (autocoder_paths.py) that
consolidates all autocoder-generated file paths behind a dual-path
strategy: check .autocoder/X first, fall back to root-level X for
backward compatibility, default to .autocoder/X for new projects.

Key changes:
- New autocoder_paths.py with dual-path resolution for features.db,
  assistant.db, lock files, settings, prompts dir, and progress cache
- migrate_project_layout() safely moves old-layout projects to new
  layout with SQLite WAL flush and integrity verification
- Updated 22 files to delegate path construction to autocoder_paths
- Reset/delete logic cleans both old and new file locations
- Orphan lock cleanup checks both locations per project
- Migration called automatically at agent start in autonomous_agent_demo.py
- Updated markdown commands/skills to reference .autocoder/prompts/
- CLAUDE.md documentation updated with new project structure

Files at project root that remain unchanged:
- CLAUDE.md (Claude SDK reads from cwd via setting_sources=["project"])
- app_spec.txt root copy (agent templates reference it via cat)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
This commit is contained in:
Auto
2026-02-01 11:32:06 +02:00
parent c4d0c6c9b2
commit dc5bcc4ae9
24 changed files with 532 additions and 86 deletions
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4
.claude/commands/expand-project.md
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@@ -42,7 +42,7 @@ You are the **Project Expansion Assistant** - an expert at understanding existin
# FIRST: Read and Understand Existing Project
**Step 1:** Read the existing specification:
- Read `$ARGUMENTS/prompts/app_spec.txt`
- Read `$ARGUMENTS/.autocoder/prompts/app_spec.txt`
**Step 2:** Present a summary to the user:
@@ -231,4 +231,4 @@ If they want to add more, go back to Phase 1.
# BEGIN
Start by reading the app specification file at `$ARGUMENTS/prompts/app_spec.txt`, then greet the user with a summary of their existing project and ask what they want to add.
Start by reading the app specification file at `$ARGUMENTS/.autocoder/prompts/app_spec.txt`, then greet the user with a summary of their existing project and ask what they want to add.